Mmel194982.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010005525.1:18411-21610[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0005 0.13 15.4 0.0 17 39 91 113 79 118 0.91 2 2 9.2e-05 0.024 17.8 0.0 7 39 227 260 221 264 0.88
Sequence Information
- Coding Sequence
- ATGGCGTCGTATCCAACGGAAGTGCGTGTGGAATTAATAAAATATTATTATAGAAATGGGGAATCTTTTGCAGCTACAGCAAGACACTTGCGTACTCTATTCGGTAGAAATAACGCACCAACGGAAAACACTATAAAAAGGATTGTAGTGAAATTTGAAGCAACAGCATCTGCGGCAGGCGAAAGATTAACTGTTAGAGAACGTCAAAAGACCATCCGGGTACCGGAAACCATAGAACGAGTACGGGAGCACTTTACAGCTCAACCTTCAACATCGACCTCAAGAGCATCTCAAGAACTTGAAATACCCCGTACAACACTAAGGCGGATCCTAAAGCAAGATCTAAAGATGAAAGCATACAAAATCCAGATCGATCAGCCGTTGAGACCGTTTGATATGGAGCGACGCTACAATTTTGCGAACGAAATCATCGAACGCATTGAAAATGGCAGCATGTCATTGGAACGATGGACACGTTTTCTTTATTCAAAATGCCTTACCGATTTTCTTCTCAAGAGTATGCGAACAAGCATTTTGTGTATAGCTACTGTAACGGCAGTGCACGTCAAGCAGTTATTGAATACCGACATCGGTTTCCCGGTAGGACAATTTCGGGAATGCGGACTGCCTGATTATCTTTTCGACCGAGGAGTAAATTTGCCAACAGATTTAGAGGAAGAAGCAGTAGCTATTGTTACAAGGGATCCAACTCTCAGTGTACGTCGAATCGCTAGAAAACTAGGAGTGCCCCGAACGACAGTTTGGCGAATTTTAAAACGTGAGGGCTTATATCCATATAATCGCAGGGGACACGGTTTGCATGAGGCAGACCACTATGCTCGTCTAGTTTATTCTACCTGGATATTAAGACATTTTAATTTCTGCAGAACAGTCCTCTGGacagatgaatctacgttcacgagaagtggtgttacaaatctgagaaacctgcacaggtggtcatcagaaaatcccaaagctatacgcccatctaaatttcaacatgaattttctattaacgtttgggcggccctaatcgatgacttgttgattggtcctgtcgttcctcctgggagattaaatgcggacaattaccctcaatgtcttattgacgaactgccaggtcttttagaggatgtcccagtgaatgttcgacgagacatgtgctttcacatggatggggcaccaccatatttcggaattgctgtccgaaattgggttaacgtcaattatccaagatggattggtcgaggtggtcctgttgcatggccacccagatcacccgatcttaatcctcttgacttttatttatggggtacataa
- Protein Sequence
- MASYPTEVRVELIKYYYRNGESFAATARHLRTLFGRNNAPTENTIKRIVVKFEATASAAGERLTVRERQKTIRVPETIERVREHFTAQPSTSTSRASQELEIPRTTLRRILKQDLKMKAYKIQIDQPLRPFDMERRYNFANEIIERIENGSMSLERWTRFLYSKCLTDFLLKSMRTSILCIATVTAVHVKQLLNTDIGFPVGQFRECGLPDYLFDRGVNLPTDLEEEAVAIVTRDPTLSVRRIARKLGVPRTTVWRILKREGLYPYNRRGHGLHEADHYARLVYSTWILRHFNFCRTVLWTDESTFTRSGVTNLRNLHRWSSENPKAIRPSKFQHEFSINVWAALIDDLLIGPVVPPGRLNADNYPQCLIDELPGLLEDVPVNVRRDMCFHMDGAPPYFGIAVRNWVNVNYPRWIGRGGPVAWPPRSPDLNPLDFYLWGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987792;
- 90% Identity
- iTF_00987792;
- 80% Identity
- -