Mmel050201.2
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000413.1:711633-715722[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 2.7e+02 4.9 0.0 3 34 17 47 15 54 0.85 2 3 6 1.6e+03 2.4 0.2 29 44 88 103 88 104 0.87 3 3 6.2e-07 0.00017 24.7 0.0 2 42 365 406 364 409 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGAAGTAGAAACAGAACAACAAATAGAGGATCATGGAAAAGTGAAACCATGACTGATTCTATGGAAGCCGTAGAAAATGGTGTAGGAGTTCGTGACACGTCGCGCTGGTTTGATGTTCCcaaatttgttttttggtttaacgactgtagaactatgacgaatggctttgaatacgctgaactgaataacattaagaacaccttcaataaaacaatacgttgggtggatagagattggttaattggattcttgaaaaataattcaactttgagcaaacgcaaatctgaagcaaccagtcttaatcgaataactgcatttagtaaactTTTTCTTTATTTATTTAAGACATTTCGTGGAATTTACAAAGGCTGCACAAAAAAAAATCCCGTTTTGGTCATTTTAGATAATTACAGTAGCTACATTTCAGTGCCAATTTATGTCTACTGCCGACAGAATGGCATAACACTGCTATCGATTGCACCACACAGCTTCCACCGAATGCAACCTTTAGACGTGACATTCTATGAGCCGTTGAAGAAGGCATATGAGTGTCAATTATTTATGAAAACCAATCCCAACCAAAAGCTTACACCATCTGATCTGCCCGATCTGTTTCGCAAAGCATATGGCCGCGTAGCAGCAGTAGAAAAGGTCGTTAACGGATTTGAGTCAACTGGCATATTTCCTGTTAATCCAAACATTTTTCCTGAAGAAATGTTTGCTGCATCTGATCTACTCACCCAACAAAGAAAAGAAGCAAATACTGAAAATAGCATAAATTTAGACATAAATCAGAACTCATTAAGAAGAAATAACGACAATCAAGTTATTTTGACCAATTCTTACATCCAAGCCGATAACGAACAACCATCAACCAGTAAAACTCAAAATGCAGCAAAGGTGCCAGTTAACTTTGTATCACCTATTCCTCAACCTTCAAGATCATCTCAGTCTAAAAAAGGAAAGAAGCGTCAGCACATTCAAAGAAGAGAAATATCCTATGATATGGAAGCACCAGGATATTACGTACCTCCAGAACATGATACAGAAGACAACGATGAATGCGTACCCTACCAAAATTATAATGACGATAACCTGGAGAAAGCAGTGTGTGCAGTTAGAGAGGGGAAATTAACGTTGAGGATGGCGGAGGAGAGATTTGGTATTCCAAAATCCATGATCCACACGAAACTAAAAAATAAACACATAAAGAAAACCCAAATGTTGGCTAAAATTGAGGAAACGAAATTAACAGAAGCAATTATTTTATTAAGGGTGCGATTAAGGCAAAACATTAAAGGAAATAGCGCCGAAATATCGGAGGAAGTTATTACTGCTTATTTTAAGAATTTTGAAGCTGTAAGATCTGACGTTCCACCAGAAAACAGTGAATTTCGACGAGACCAACTTTTCGGATGGATCCTGAATGTCCAAAAATGGTATGCAAGAGAAGATCTAAATATTGCGAACGTAATTTTGCTTCCATATTTCAGAAGAAGAGATCAAAGAAAAATTCTCATTGGTGATAATCTCTCATCACATTTGTCGGTTGATGTAATAACAGAATTCGAAAGAAACGACATTGATTTTGTATTACTTCCACCGAACTTAAAACGAGCTTATCGAAGAATTTTGTTCAATTGGAAAGCTAAAAAGAGAGGGTCTTTTCAAAAAGGTGATTTTCTACATTTGCTTGCTAGCACATTAGCGAACATCCAAGCTTTTTCGCGAGAAACTATACAGGCGGTGTTTAAAGCCTGTGGCATAGAACCCTTCAATCCAGAAGCAAGAGAAATTGGACGGATTCGATGGTTAATTTATTTTAAAACGACACGTATGCCAGAACCACAAACGAAAACCAGAAGAAAGCGAATAACTGCAGCTCCAGGAACAGCTATAGTGAGATCTCATTTCAATGATGCAGAAAATAATCGAGAGGGTGAATATCGTAGATCGCAGACGAAGAGAAAAGGACTTGCTACAAAATGA
- Protein Sequence
- MPRSRNRTTNRGSWKSETMTDSMEAVENGVGVRDTSRWFDVPKFVFWFNDCRTMTNGFEYAELNNIKNTFNKTIRWVDRDWLIGFLKNNSTLSKRKSEATSLNRITAFSKLFLYLFKTFRGIYKGCTKKNPVLVILDNYSSYISVPIYVYCRQNGITLLSIAPHSFHRMQPLDVTFYEPLKKAYECQLFMKTNPNQKLTPSDLPDLFRKAYGRVAAVEKVVNGFESTGIFPVNPNIFPEEMFAASDLLTQQRKEANTENSINLDINQNSLRRNNDNQVILTNSYIQADNEQPSTSKTQNAAKVPVNFVSPIPQPSRSSQSKKGKKRQHIQRREISYDMEAPGYYVPPEHDTEDNDECVPYQNYNDDNLEKAVCAVREGKLTLRMAEERFGIPKSMIHTKLKNKHIKKTQMLAKIEETKLTEAIILLRVRLRQNIKGNSAEISEEVITAYFKNFEAVRSDVPPENSEFRRDQLFGWILNVQKWYAREDLNIANVILLPYFRRRDQRKILIGDNLSSHLSVDVITEFERNDIDFVLLPPNLKRAYRRILFNWKAKKRGSFQKGDFLHLLASTLANIQAFSRETIQAVFKACGIEPFNPEAREIGRIRWLIYFKTTRMPEPQTKTRRKRITAAPGTAIVRSHFNDAENNREGEYRRSQTKRKGLATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -