Mmel141690.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001532.1:698264-700157[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 3.7e-08 36.4 0.0 1 36 58 93 58 99 0.93
Sequence Information
- Coding Sequence
- ATGGGTAAAAACCAATTAAATCTCGACAAAAATAAATTATTTTTATTATTATTTTTCAGGCTATGGTGGGAGTCTACAAAAGAAAAAGTAGCCAGTCATGGGATAGGGAGAACGATAAAAACACACAATGTTCTGTTTCACCGTACAACGGTTTCTTCGGATATAGCCGAGGATAGGGAGAACATGCAGAAAGCCATAGATGCTGTAAACAATGGCGAAGTTGGCTGGCTTAAAGCATCAAAAATGTATGGGGTACCACAATCTACTCTGAGACGCAGATGGCACAATAAAAACAAGCAAGTTTTGGGAGTGGAAAAAAGACTCGGTCGTTTTGCGATCACATTTCCGTTCTGCAAGGATACAAAAATGGCAGGTTGGGAGTGGCTGCGTGGTTTTCGTATGAGACACCCAGATATCTCACTGAGGCGGCCTGAGGCAACATCATTTGGCAGAGCCCAAGCTTTCAGCAAACCCCAAGTCAGTATATTTTTTACGATTCTACAGGACACCATGAAAAAACATAATATCCATTGCACTAAAATCTGGaatatggatgaatctgcactcactacagtgcaaaaacctaataaagtgtttgctacaaagggaaagaagcaggttgatgctcttaccagtgctgaacgtggccaacatgtgcctgtagtttgctgtatgagttcatcaggaggttttattcctccagcattaatttacgcaagaaaaaggtggaagaatgagcttattgatggagcgccaacgggaactgtgggacttgtacaggattctagttggatgactggcgagctgtttctaaaatggttgatgcattttaaggagtatacaaatcccactttggaaaacaaggtgttgctgctgctcgatggtcactcgagtcataagcatgtcgatgtaatatcatacgccaaagaacatggtatactgatgttggctttcccacctcactgtactcatcatctgcagcctttagatgtttcctttcttggcccgctgaagacgtactatgatttggaagtgacaaaatggttgaaatgtaaccctggtagggttgtgacccaataccaaattgctggcttatttgctcaggcatatggaaaggcagctaccaatcaacatgccttaagcggctttcgaaacacaggaatctggccctgtaatccagacatcttttctgaccatttattttctcctgcagtgactacTGACAGAGTCATTGACGGAGTCGATGAAAACAGAGTAGTCGAGAATACAGCCACCACTACGAGTAAAGGTGATACTGCCCCAACTCAAGCTCAGAATTACCTTAAGGCCAAGGCAGCGGAAAAAAAGAAAGTCGAAGAGCGTCGTGCTGCAATACGGGCTAAAAAGAATTTAGCTGCAATGAATAATGACGCAAATGATGACGAACCTTATGCAGATGAGGATGATCAAGATGCAGCTTGCCTATATTGTAATGGACTCTACAGTCAATCTAGGTCAGGGGAACTGTGGATGAGGTGCATGAAGTGCTCTTTGTGGGCTCATGGCGAGTGTGCAGGACTATCTGCTAGAGCAAAAACCTTGTGTGCGAAGTTTGCCAATAGGAAATGTGGATATGCCATTTTACCCACAGTAATTAAGATAAAATGA
- Protein Sequence
- MGKNQLNLDKNKLFLLLFFRLWWESTKEKVASHGIGRTIKTHNVLFHRTTVSSDIAEDRENMQKAIDAVNNGEVGWLKASKMYGVPQSTLRRRWHNKNKQVLGVEKRLGRFAITFPFCKDTKMAGWEWLRGFRMRHPDISLRRPEATSFGRAQAFSKPQVSIFFTILQDTMKKHNIHCTKIWNMDESALTTVQKPNKVFATKGKKQVDALTSAERGQHVPVVCCMSSSGGFIPPALIYARKRWKNELIDGAPTGTVGLVQDSSWMTGELFLKWLMHFKEYTNPTLENKVLLLLDGHSSHKHVDVISYAKEHGILMLAFPPHCTHHLQPLDVSFLGPLKTYYDLEVTKWLKCNPGRVVTQYQIAGLFAQAYGKAATNQHALSGFRNTGIWPCNPDIFSDHLFSPAVTTDRVIDGVDENRVVENTATTTSKGDTAPTQAQNYLKAKAAEKKKVEERRAAIRAKKNLAAMNNDANDDEPYADEDDQDAACLYCNGLYSQSRSGELWMRCMKCSLWAHGECAGLSARAKTLCAKFANRKCGYAILPTVIKIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987956; iTF_00987976; iTF_00987729; iTF_00987768; iTF_00987769; iTF_00987978; iTF_00987851; iTF_00987840;
- 90% Identity
- -
- 80% Identity
- -