Mmel145977.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001619.1:105145-107942[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 7.6e+02 3.4 0.0 7 32 79 105 75 108 0.88 2 2 3.4e-09 9.1e-07 32.0 0.0 2 39 133 170 132 173 0.90
Sequence Information
- Coding Sequence
- ATGGCAGAAATACGTGCCTTAAGCAGAATTACAGATATTGCATACAGTAATTTCTTGGAGATCTACAAAAAAGAGTACTGGAAATTGATTTATGATGAAGAAGGTTCTTACTTATTTCGTAAgcgCATTCCTCATTACAGAACGTTTCTGGAAGTACACAGACAATTTCGAGAATGCGGACTGCGTGATTGTCTTTTCGACCAAGGAGTAAATTTGCCAGCAGACTTAGAGGAAGAAGCAGTAGCTATTGTTACAAGGGATCCAACTCTCAGTGTACGTCGAATCGCTAGACAACTAGGAGTGACACGAACgacaCACTATGGTTCTTTGGAATTAATATTTCTAAATGGTGTTTGCTACGTACCTAACCTAAAAATAAAGCTACGAAGTTACCGCCCTGAATCAGCGGAAGAAGCCTTGGCAGCAGTTGTAGATGGAGGTTTATCGTTTTGGCAAGCAGCCACGCGATATGGCGTCCCAAATGCGATACTATACAAAAAGTACAGAGGAATGCGTGGCGATAAATTAGGAAAACCCCCGACAATTTCCGTAGCAGAAGAAAATATAATTAGTCAGGCCATCATTACGGCGGCAGAATTCCGATTTCCCATTTACTGA
- Protein Sequence
- MAEIRALSRITDIAYSNFLEIYKKEYWKLIYDEEGSYLFRKRIPHYRTFLEVHRQFRECGLRDCLFDQGVNLPADLEEEAVAIVTRDPTLSVRRIARQLGVTRTTHYGSLELIFLNGVCYVPNLKIKLRSYRPESAEEALAAVVDGGLSFWQAATRYGVPNAILYKKYRGMRGDKLGKPPTISVAEENIISQAIITAAEFRFPIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -