Mmel077860.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000653.1:260975-271750[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0017 0.46 13.7 0.0 6 40 68 103 68 107 0.88 2 2 6.5e-06 0.0017 21.5 0.0 2 39 602 639 601 643 0.88
Sequence Information
- Coding Sequence
- ATGCGCAAGCGTAGTACTAATACTAATTTCTGTCTGAACGATCATATATTTCATAAGATTAATTCTAAAGTTAGGACTAATACTAATACTAAgcgcaatcCTCATTACAGAAAGTTCTTGGAAGTACACAGACAATTTCGGGAATGCGGAATGCGTGATTATCTTTTCGACCGAGGAGTAAATTTGGCACCAGATTTAGAGGATGAAGCAGTAGCTATTGTTACAAGGGATCCAACTCTCAGTTTATGTCGAATCGCTCGACAACTAGGAGTGCCACGAACGACAGTTTGGCGAATTTTAAAACGTGAGGGCTTATATTCATATCACTATCGCAGGGGACACGGTTTGCTTGAGGCAGACCACTATGCTCGTCTAGTTTATTCCACCTTGGTATTAAGACAGTCACGGCTTCATTTTAATTTCAGCAGAACAGTCCTCTGGAGAGATGAATCTATGTTCCCTCACGCGAGAAAATGTTTAGCTCACGAGTCCGCTAGGACGAGTGAGCTACTTTTCTCAAGTGACTTATTTGTAATTAACACACTAATGCAGTTACTATGGAGAATAAATAATGCAAATCAACAAGCAAACAAAATTAAATTTCGTCATTTTGAAGAATGGAGAAAACAGCAAAGTATCACTGGAATTAACGAAGAAGTTATGCTGGCGTATTTCCATATTTATAGAAGGAAAATAGCACCTTCTTCATTGTGGACGAAGTATTCCATGTTAAGAAGTACTTTGAAAGTGTATATGAATAGTGACATATCGAAATACGGAAAACTGATTTCCTATTTGAAGAGTGAGGCAAGAACCCACAAGTCCAAAAAGGCGAAAATCTTGGAGAGGCTACATATAGAGAAGTTTCTGAATGAGGCTCCTAACAATAAATATTTTATGATGAAGGTTGCCTTAATAATGGGTATATCAGGTGCGTGTCGTTGTGATGAAATAACTAAGCTGAAAGTTGACGATATAGAAGATAAAGGAGGATACTTGTATGTTTCGATACCTGACACAAAGACAAACGTATCTAGAAGTTTCACTGTTATGGCAGAAGGATTTACAACAGATATTCTTGACCTCTACAGAAAATATGTCTGTATGAGACCAAAAGGTATTCCACATGGTAGATTCTTCTTAAATTACAGGAAAGAAAAATGCACTATCCAGCCAGTTGGAATTAACACCATTTCTAAGATACCTCAGAAAGTTGCATCTTTCCTGAACCTACCAGAAGCTCAATTATATACAGGATCTAGTCTGAGACGTTCGTCAGCATCTCTTCTGACAAACGCAGGAGCTGATATTACAACAGTTAAACGACATGGTGGGTGGAAATCGTCCACTGTGGCAGAAGGTTATATACAAGATTCAGTATCCAACAAGATTGATATAGCCAGAAAGATACAAGGTCCAGACAGTCTAACGTCCTCGACTTCTGGTCATCAAATTTCTGTTCAGGATACTTCAAATACGTCTTCTAGTATAACTCTAAATTCGAATAACCTGAATGCAGAGCCAGATACAAAGAGGATTTCCTTCAACTTTAATATTAATGTAAATGTAAACTTAACTGGACCTAAATACCTACAGTTTTTGGAAGAATTAATACATCCTCTTATCATACTGTGCCTAGAAGAAAACTTGAATGAAATAGACGAGGAACAATTATACTTCCAACTAGATGAAGCTGGGACACATTACAGTTTAGAAGTTAGGAATTATTTGGATAATGTTTTTCCAGGACATTGGATAGGACTGCCACGAAGCAAATTTGGCAAACAACGTGACACTGTACCACCTGACTTAATTAAAGAAGCTGTGCGAGAGGTTTTCGAAAAACAAGCATCTATACGTAATGTGGCAAAAAAATGGAATATTAGTAAATCTACATTACATAATTATATAAAAAAACAAAATCCGAACATCACATCTGTGGAAGATATTGTAGCTGCGGTTCCTAATTATGCCGTTCATAAAGTTTTTAATGCTGCAGAGAAGCAAGAATTGTTTAATTATCTGGAAAAATCCGCATTCCTTCATTTTAatagaccGGAACCCCCAGCAGAAAAAGTTCAAAGTTCGCCGACAAATCCTGTTTTTGTAACTGATCCCAGTCCACGCGCAAGTTTCAACTTTTTACCACAGTTTGAATCAACTCCAAGTACTAACTCTTTGACTGTGACTGCAGCAAATTCAAGTACAAATGCAAACTCTGCATCTCTGATTAAGCAGATCCCGTTTACGTCTTCACCATCTCTGTCTGTTGAATCTATCATACCATTTCCAAAAGCATCTGCCAGAAATAATAGTGGCAGAGGGCGTAGAAAGAAAGGCAAGACACGTATTCTAACAGACACACCCGAGAAGAATGAGCTGTTACTACAGAGCGCTATTAAAGTAAAAAAGAAGAAAGCGAATGAAGCGAAAGTGAAAACAAAAGTAAAAAAAGTATCAAAAAAGGCAAGAAATGAGTTATGTAGTTCCTCTTCCGAAGATGGAAGTAACGATGATGTATCTTTTCAAGATACTTCTGACGATGATTTTAATATTGACATTTCTGATGATCAGCTTTATTTTGAGCCAGAGCAATATGACCAAGTTGTGGCGTCGAAAGGAAAGGCTAGCAAAATACAGAAGGGAGACTTCGTATTAGTAAAACTAGCTTCCAAAAAACTCATAAAAGATTATGTTGCTAATGTGCTGGAAGATATTAGTAATTGTGCTTACATTGTAAAATTTTACGAGACTAAAAAGAATAGTAACTACTTTTTAGAAGGGAAAGAAAAGCCCTATGAAATAGACGCTGATGATATTATTCTGAAGTTGCCATCACCTCGAGCGGTGACTCTGCAAGACTACATTCTCATATTATATTTGATTTTCTTTCGACAATTACAATATGTCTTAATTTTTGTGTTAGAAATTGTTCATATTCTACAGATTTTGTAG
- Protein Sequence
- MRKRSTNTNFCLNDHIFHKINSKVRTNTNTKRNPHYRKFLEVHRQFRECGMRDYLFDRGVNLAPDLEDEAVAIVTRDPTLSLCRIARQLGVPRTTVWRILKREGLYSYHYRRGHGLLEADHYARLVYSTLVLRQSRLHFNFSRTVLWRDESMFPHARKCLAHESARTSELLFSSDLFVINTLMQLLWRINNANQQANKIKFRHFEEWRKQQSITGINEEVMLAYFHIYRRKIAPSSLWTKYSMLRSTLKVYMNSDISKYGKLISYLKSEARTHKSKKAKILERLHIEKFLNEAPNNKYFMMKVALIMGISGACRCDEITKLKVDDIEDKGGYLYVSIPDTKTNVSRSFTVMAEGFTTDILDLYRKYVCMRPKGIPHGRFFLNYRKEKCTIQPVGINTISKIPQKVASFLNLPEAQLYTGSSLRRSSASLLTNAGADITTVKRHGGWKSSTVAEGYIQDSVSNKIDIARKIQGPDSLTSSTSGHQISVQDTSNTSSSITLNSNNLNAEPDTKRISFNFNINVNVNLTGPKYLQFLEELIHPLIILCLEENLNEIDEEQLYFQLDEAGTHYSLEVRNYLDNVFPGHWIGLPRSKFGKQRDTVPPDLIKEAVREVFEKQASIRNVAKKWNISKSTLHNYIKKQNPNITSVEDIVAAVPNYAVHKVFNAAEKQELFNYLEKSAFLHFNRPEPPAEKVQSSPTNPVFVTDPSPRASFNFLPQFESTPSTNSLTVTAANSSTNANSASLIKQIPFTSSPSLSVESIIPFPKASARNNSGRGRRKKGKTRILTDTPEKNELLLQSAIKVKKKKANEAKVKTKVKKVSKKARNELCSSSSEDGSNDDVSFQDTSDDDFNIDISDDQLYFEPEQYDQVVASKGKASKIQKGDFVLVKLASKKLIKDYVANVLEDISNCAYIVKFYETKKNSNYFLEGKEKPYEIDADDIILKLPSPRAVTLQDYILILYLIFFRQLQYVLIFVLEIVHILQIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -