Mmel088808.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000783.1:488190-489092[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-11 5.1e-09 39.2 0.0 1 38 15 52 15 58 0.89
Sequence Information
- Coding Sequence
- ATGGTGGGAGTCTACAAAAGAAAAAGTAATCGCCAGTCATGGGATAGGGAGAACATGCAGAAAGCCATAAATGCTGTAAACAATGGCGAAGTTGGCTGGCTTAAAGCATCAAAAATGtatggggtaccacaatctactctgagacgcagagcgcacaataaaaacacgcaagttttggtacttgaagggcttgaagaggaactaaaggaacatataaaattgctagaatctcaattgtttgggttatcatgcaatgaagtccgtcaactagcatttcagcttgcggaaaagaatggaattgagcacaggttctgcaaggatacaaaaatggcaggttgggagtggctgcgtggttttcgtatgagacacccagatatctcactgaggcggcctgaggcaacatcatttggcagagcccaagctttcaacaaaccccaagtcagtatattttttacgattttacaggacaccatgaagaaacataatatccattgcactaaaatctggaatatggatgaatctgcactcactacagtgcaaaaacctaataaagtgtttgctacaaagggaaagaagcaggttggtgctcttaccagtgctgaacgtggccaacatgtgactgtagtttgctgtatgggagtatacaaatcccactttggaaaacaaggtgttgctgctgctcgatggtcactcgagtcataa
- Protein Sequence
- MVGVYKRKSNRQSWDRENMQKAINAVNNGEVGWLKASKMYGVPQSTLRRRAHNKNTQVLVLEGLEEELKEHIKLLESQLFGLSCNEVRQLAFQLAEKNGIEHRFCKDTKMAGWEWLRGFRMRHPDISLRRPEATSFGRAQAFNKPQVSIFFTILQDTMKKHNIHCTKIWNMDESALTTVQKPNKVFATKGKKQVGALTSAERGQHVTVVCCMGVYKSHFGKQGVAAARWSLES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988047; iTF_00987909; iTF_00987911; iTF_00988074; iTF_00987984; iTF_00987739; iTF_00987735;
- 90% Identity
- iTF_00987909;
- 80% Identity
- -