Mmel183177.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010003138.1:66933-75850[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-09 1.9e-06 31.0 0.0 2 43 153 194 152 196 0.91 2 2 4.8e-05 0.013 18.7 0.0 7 39 460 493 456 502 0.93
Sequence Information
- Coding Sequence
- ATGAGTGAAGACACAAACAAAATGCAGTTTCTAGAGAGATTGGCTGTGCAACCTTTGGAAGGGCGTCGTTACTTCACATTGGTTATGTGGACGGGTCGAGGTACTTCGGCTCAGGGGCGTACCGACGAGCTTGTAGAAAGGCGAAATACGTCTCTGGGGAGGGATATGTTCGTACACGTGATAAAGACAAAAGAATATTTAAAGGATTATTACGTGGATAACAGAGCCAAAGAAGCAGGACATACAATTTTGCTTTTACCACCATACCATTGCATTTTCAATCCCATTGAATTGATATGGGCCCAACTGAAAAATACCATAAGACGAACAAATCAAACACCGAAATTTAGTGAAAGTGTTGTAACACACATAAAAAATGCTATGGAACATATAACTGCTGTAAATTGGAAAAATGCTGTTAAACAGAATAAAAAGAAGGAAAGGCAGCTGTGGGAGGAAGAGAATATGGCTTCTGCAATTGAAGCCGTAAGAAATAAAGTTATGGGGTACACAATGGCAGTTAAAACTTTTAATGTTCCTCATACTACACTACGCAGAAGACTCAATCAAAGTAATGGTAGTAAAAAGGGATACCTAGGTGGCTATAAGCCTACATTTAatgaaacCAGTAGCGCCGAACGTGGACAACACTACACTGCCGTATGTTGTATGAACGCAATAGGAACATTTGTTCCTCCTGCTTTTATCTTCCCACGCAAACGTTTTAAAGCCGAATTAATGGATAACGCACCAGTAAGCAACATGCCAAATGAAAATATGAATGATGATAATAACAACAAAGCTAATTCAGAGATCTTGCACGAAGTTGAAGTCGATCAAAACGTCGCAACTACCTCAGTAAAAAATATAAGCATAGAACAAATTGAAGAGTTATCTCCTTTTCCTAGAGCACCAAGAAGAGATACAACAAGAAAAAGAAAACGTGGTAAAACAGGTGTCATCAACAACACTCCAGACTTAGAAGTAATTAAAGAAAAGAAGAAAGAAGTATTGGACACAGACCGAAGAAAAACCAccaaaaaagtataTGCAAACAGTAATTTCTTGGAGATCTACAAAAAAGAGTACTGGAAATTGATTTATGATAAAGAAGGTTCTTACTTATTTCTGGACACGTTTTCTTTATTCAAAATGCCTTACCGATTTTCTTCTCAAGATTATGCGGACATGCATTTTGTATATGGCTACTGTAACGGCAGTGCACGTCATGCAGTTATTGAATACCGACATCGGTTTCCCGATAGGTGCATTCCTCATTACAGAACGTTTTTGGAAGTACACAGACAATTTCGGGAATGCGGACTGTGTGATTATCTTTTCGACCGAGGAGTAAATTTGCCAGCAGACTTAGAGGAAGAAGCAGTAGCTATTGTTATAAGGGATTCAACTCTTAGTGTACGTCGAATCGCTAGACAACTAGGAGTGCCACGAACGACAGTTTGGCGAATTTTAAAACGCGAGGGATTATATCTATATCACTATCGCAGGGGACACGGTTTGCTTGAGGCAGACTACTATGCTCGTCTAGTTTATTCTACCTGGATATTAAGACATTTTAATTTCTGCAGAACAGTCCTCTGGACAGATGAATCTACGTTCACGAGAAGTGGTGTTACAAAGTCTGAGAAACTTGCACAGGGGTACATGAAAAATTTAATCTACGCGCAAGTTTCGAACACAAGAGAAGAGTTGTTGGATCGTATTCACCTGGCTGCCGAGCAAATACGACAAAACAAGTATGAAATTCGGATAAGTACTTCTTCTGTTGGCTTACGGGCACAAGCCTGCATTCAACAAGGATTGAACTTTTTTAAATAA
- Protein Sequence
- MSEDTNKMQFLERLAVQPLEGRRYFTLVMWTGRGTSAQGRTDELVERRNTSLGRDMFVHVIKTKEYLKDYYVDNRAKEAGHTILLLPPYHCIFNPIELIWAQLKNTIRRTNQTPKFSESVVTHIKNAMEHITAVNWKNAVKQNKKKERQLWEEENMASAIEAVRNKVMGYTMAVKTFNVPHTTLRRRLNQSNGSKKGYLGGYKPTFNETSSAERGQHYTAVCCMNAIGTFVPPAFIFPRKRFKAELMDNAPVSNMPNENMNDDNNNKANSEILHEVEVDQNVATTSVKNISIEQIEELSPFPRAPRRDTTRKRKRGKTGVINNTPDLEVIKEKKKEVLDTDRRKTTKKVYANSNFLEIYKKEYWKLIYDKEGSYLFLDTFSLFKMPYRFSSQDYADMHFVYGYCNGSARHAVIEYRHRFPDRCIPHYRTFLEVHRQFRECGLCDYLFDRGVNLPADLEEEAVAIVIRDSTLSVRRIARQLGVPRTTVWRILKREGLYLYHYRRGHGLLEADYYARLVYSTWILRHFNFCRTVLWTDESTFTRSGVTKSEKLAQGYMKNLIYAQVSNTREELLDRIHLAAEQIRQNKYEIRISTSSVGLRAQACIQQGLNFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -