Basic Information

Gene Symbol
pnr
Assembly
GCA_028455855.1
Location
JAPTHL010000048.1:5530191-5532431[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-18 6.2e-15 54.1 3.2 1 34 129 161 129 163 0.97
2 2 3e-19 4.5e-16 57.8 5.8 1 35 188 221 188 222 0.98

Sequence Information

Coding Sequence
ATGTTCCATTCAAGTACTGGTAGTGGTGGTTACAGTGATAGCAATTCAAGTTTCCATCAACATCTCCAACAATCACCGGTCTATGTTCCTGGCAGTCGTACAGTTCCACAATATTCAACACCGACTGGTGGGCATTTTGCTGCTGCTGCTGCAGCAGCAGCGGTGGCACATCAAGCCAATTGGCCACATACTGGTCCGACATATAGTGATATGACAACATCAACGGCACACACATTAAATACAACACCACATCCAAGTGCATTAACGGCTGGACAATTTTATCCACCAAATATGATGATGGGTTCGTGGAGGGCGTACGATGGTACTGGCTTCCAACGAACATCCCCATATGATATGGAGTATCAGTTTGGCGAGGGTCGGGAATGTGTTAATTGTGGTGCCATTTCTACCCCATTATGGCGCCGTGATGGTACTGGTCATTATCTTTGTAACGCTTGCGGTTTATACCACAAAATGAATGGAATGAATCGGCCGTTAATTAAACCTTCTAAGCGATTGGACTTCTCATTTCAGACGGCAACACGACGCTTAGGTTTATGTTGTACAAATTGTGGTACACGCACAACAACTTTATGGCGTCGTAATAATGATGGTGAACCAGTATGTAATGCTTGCGGTTTATATTTTAAATTGCACGGTGTGAATCGACCATTAGCAATGCGTAAAGATGGTATACAAACACGCAAACGCAAACCGAAGAAACCGATTGGTAGTGAACGTGATGATACAAACTCCACCTCTATAGACGAAACGAAACAATCTCTAAATCACCCAAATTCGCAACAACAACAACAACAACAACAGCAACAACACACTCCACAAAATCAACAATCAGCCCAACAACAACCACAGAACCATCACCAATTAGAGAAGAATCCACCATTATTAGATCGTCCATATTTGGGTCAAACATCATTATTACCACCACCATCAACAAGTACAAGTAGTACAATTAAAAGTGAACCGGGCTACGAATATAATTGTTTACAAAATCAATCATATTCGTATCAACAAATCTTTGGTTTTCCAAATACAACACAACCGACTACAAATACGGAAATGGCATATCATCATCAACACCATGTCACAGCTGCTGCTAAATTAATGGCATCAACTTAA
Protein Sequence
MFHSSTGSGGYSDSNSSFHQHLQQSPVYVPGSRTVPQYSTPTGGHFAAAAAAAAVAHQANWPHTGPTYSDMTTSTAHTLNTTPHPSALTAGQFYPPNMMMGSWRAYDGTGFQRTSPYDMEYQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLDFSFQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPIGSERDDTNSTSIDETKQSLNHPNSQQQQQQQQQQHTPQNQQSAQQQPQNHHQLEKNPPLLDRPYLGQTSLLPPPSTSTSSTIKSEPGYEYNCLQNQSYSYQQIFGFPNTTQPTTNTEMAYHHQHHVTAAAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00842315;
90% Identity
iTF_00929988;
80% Identity
-