Mdia006895.1
Basic Information
- Insect
- Meloe dianella
- Gene Symbol
- -
- Assembly
- GCA_028455855.1
- Location
- JAPTHL010000050.1:2059261-2066448[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 8.3 5e+02 1.1 0.2 3 15 6 18 5 21 0.80 2 16 0.16 9.6 6.5 0.1 3 23 299 320 297 320 0.89 3 16 0.49 30 5.0 0.1 1 23 409 433 409 433 0.77 4 16 0.00044 0.027 14.6 4.6 1 23 558 581 558 581 0.96 5 16 0.02 1.2 9.3 2.5 2 23 588 610 587 610 0.95 6 16 0.00081 0.049 13.7 3.9 1 21 695 715 695 716 0.96 7 16 0.0012 0.072 13.2 2.1 2 23 728 750 727 750 0.94 8 16 0.0089 0.53 10.5 2.4 1 23 753 776 753 776 0.96 9 16 0.078 4.7 7.5 0.4 2 23 782 803 781 803 0.94 10 16 0.084 5 7.4 1.1 1 23 807 830 807 830 0.97 11 16 0.055 3.3 7.9 0.3 2 23 837 859 836 859 0.94 12 16 0.024 1.5 9.1 0.5 2 23 868 890 867 890 0.95 13 16 0.44 26 5.1 0.5 3 23 897 918 897 918 0.96 14 16 4.6 2.8e+02 1.9 2.3 2 23 988 1010 987 1010 0.94 15 16 3.2 1.9e+02 2.4 1.4 2 23 1017 1039 1016 1039 0.88 16 16 0.17 11 6.4 0.9 1 23 1052 1074 1052 1074 0.96
Sequence Information
- Coding Sequence
- ATGGAAACGAAATTGTGTCGAATTTGTGGTAAATCCGGTCAAAATTATTCAAATATTTTCAAAATAGAAGGTTTAAAAAATAAAATTGAAACATGCCTACCGATTGTTATATCGCAGTATTGTTTATTGCCAGATACGATATGTGGGGAATGTTTAGAGAATGTTGATAATTTTTACAATTTCATCAAGAATTGTTTGCAAAACATCATAATATTAGAGGCACAATACGATATAACAGAAAGTTGTTTAAAAACGAAACGCAAATATGAGAAGAGCACAACAACGGATTGTTTAATACGACAATTCGATCGAAATTGTCAAACCGATGATCTATTCGATGTTTATTTAAGAAATTTCCATCAACAATATGATGATAATAATTGTGATAATTTACCAAAATTACAAAATTTCAATCGTTTAGTCGATTATGATATTGGTGGATCTGATGATACACAATCAGATGATGATGGTGGTGGTGGTGGTGGTGGTGTAGCATGTAAAAATAATTTATTAACACTAAATCGACGTTATTTTGATGATAATGAAAATAATATTATCAATGAAATTACAAAAAGGAAAACGACACGCAAACGGAAATTTGATGGAATTATTGAAAATCAACAAACTAAAATATTTCGAATGGATCGTCGAAAGAATCGTCAACCGAAAAAAATGGAACTTCCACAATTACAACAAGAGAAAATCGAATTATTTGATGATTATCAACTACAACAGGATTTCAGTTTAGAATATTTAGAGAAAATCTACGATATTAATAATATATCACCAATTATTACAATCAAACAAGAACCTATAACAGAATTATCATCACAATTAACAGCAACAACAAATCAACAACAACAACAACAACAACAAGAATTACTACCTCAGATATGTTTATTATGCGAAGAACAATTTACAGGTCCATCAACATTAGCTAGTCATGTTTTTGAAACGCATGGTATTGATATGGCGCAAATTCTACAACAACAACAACAACAACCAATTATTGATTGTAATAATGAGAAAAAGAAGAAATTACCAAATTTACTGAAAATCTCCGATTTGAAACAACTTAATGATTCCATAGatgatgctgctgataacagagatgatttgatgaatttatcaaataatgttattgatgattgtgataatgatgttgatgatgatgatgatgatgatgatgatgataatcgttcaccaccaatattaacagcGAATTATGTATGTCCAATATGTCCATCAATATTCACAATAAATCGTCAAGAATTATTTAATCATTTAGAACAAATCCATCCAGAACAATCATCATTATTATGTGGCATATGTTTATATCAAGCAAATACAATTGATCTATTAAAACAACATATTGATATATGTAAAAAACAAAATCAATTATTAACACGTTATTATTGTAAAATATGTTTATATGGTGATGATAATATGATAATATTAGAGAAACATATATTAATACATAAATTTCTATTAGATAATTGTCGTAAATCAATGAAAATCTTCGATCCAATTGATTATATTGAATTAAATAATAATTATCAATATGGTAATAGATCACCAAATACAAAATTATTAATATGCAATCAATGTGGTATTGATAATTTTTTATCATATAATGATTATAGCCAACATTGTAGACAACAACATTCAATATTCCATTGTGATTTATGTAATAAATTTTATGGACGCAATTCACATTTATGGAAACATGTGAATCGTTTACATAAAGGCCATCCATCAATTACATGTCAATTATGTTATAAAACTAGTGCATCTAAATATCATCTATTGCAGCATTTCAATAAAATCCATAATAATTCAAAACAACAACAACAACAACAACACCAACAAGATTTTATGCAACAGAAATTTCAAGCATTCGATTTTCAATCAGTCAAACAAAGTTTTATGCGACAAGAATTATTAGAACAAACAACAAATAAACCAAATGATGATGATGATGATGGTGGTCCAAAAGAGATTGATGTGAATAGTGATTTATATACGAATATCATCACAAATTATACACCACCACCATTACAACAACAACAAGATAATGGTGAATATAAATGTACGAAATGCAATAAAGGCTTCTTTAAACGTACATTATTAAAGAAACATCGTAAAAATTGTCGTCCACGTTCACAAAAAGATTTATTAACACGTTGCAAAACATGTTCGCGTATATTTAAAGATCGTCAAAGTCTATCAAAACATTTAATTAATTACCATACAAAATATACATGTGAAATATGTGGACAATGTGTTGAAAGTAAATGTGAAATAATAACACATATACGTTTTCAACATCCACAAAATCAATTAATATGTAAATTATGTAAGAATATCTTACGTAATCAATATGAATTGAAAATACATGAATTGAATCATTTAAATTCATATGTATGTCAATTTTGTGGTGATTGTTTAGATAATAAAATCAAATTGAAAATGCATATATTAAGTTTACATAGGAAAATATTGAATTTAAGTTGTGGTATATGTTTGAAATTATTTGAAAATCAAATTAAATTACGTGAACATGTTAAATTACAACATTACAATAATATACAATCATTAACAACATGTCCGGTATGTGGTAAAAATTATGGTTCGAAATGGAAAACATATGATCATTTAAATAAATCCCATGGACGGATATTTAAAGGATGTAAAATATGTTTAGAATTATTTGATAATGATACACAATTACAAATACATTATAAACAATCACATCCAAATAATAACAATAATCATAACAATCAACAACAACAACAACAACAGAAACAACAAAGTGATAGTGATCATGATGAAAGTGATGAAGAAACACCACCACCACCAACAACAACAACAACAGTTGTAAAAAAACAACAACAGAAATTAACAAATCCACAACAAAACAGTTCGAAACGTACAGTATATGTAAATAGTAATGATCCAAGTTATTGTGAGATATGTTTAAAGACATGGCCAGCAAAAAAACATTTATGGCAACATTATATACGTTGTCATAAGCAAGTTGCAGCAACTGTATGTGGTATATGTTTAAAAACAAATCATAATTATATTGATTTACAAAAACATTTAAAACAACAACATCCATCATTATTATATGGACAAGGTTTCGGTTCGAATTTTATATGTCGTATATGTGGACGTTATCATAATGCTAGTAGTAAATTAAAATTACATATGGCTATACATGAGAATTTCAATTGGGATTTATTAaatcaaaacaatgataatgataacaatgataatacaacaactaatgctgataataaagaagcaaaaacaacaaatggctatggtagtggtggtggtagtagtagtagtagcagtagtagtagtagtagtaacaacagcacaactagtaataataataatgatgatgatgatgatgatgataatattaattatgaaagtttaattgaacaagttgaatgttcatcaaatgataatacacaaactactagtgatgatgatgatgatgatgttgttgagaaaaacgatagcgatagtgatacagatgattcaagttctgataatgatgaatcatctaatgataatgaatctctagtctctgataataatttattagattcacctgaacaacaatcacaacaacaacaacatgatgatggagaaagtgataatgatctcgatgatgatattaatgatcgtgatatatttaatacaaagactgaagaattgcattctgcaatacaatcaattgaagaacaatttattgatgatgatgatgatgatgatgatgttgatgatgatatagaaattgaggattattgtgatttacaagaggaacaacaattacaaaaacaaccaccaccaccattactaaatgataatgaaattgaATCAGCTGTTGGTAGTATTTTGTAA
- Protein Sequence
- METKLCRICGKSGQNYSNIFKIEGLKNKIETCLPIVISQYCLLPDTICGECLENVDNFYNFIKNCLQNIIILEAQYDITESCLKTKRKYEKSTTTDCLIRQFDRNCQTDDLFDVYLRNFHQQYDDNNCDNLPKLQNFNRLVDYDIGGSDDTQSDDDGGGGGGGVACKNNLLTLNRRYFDDNENNIINEITKRKTTRKRKFDGIIENQQTKIFRMDRRKNRQPKKMELPQLQQEKIELFDDYQLQQDFSLEYLEKIYDINNISPIITIKQEPITELSSQLTATTNQQQQQQQQELLPQICLLCEEQFTGPSTLASHVFETHGIDMAQILQQQQQQPIIDCNNEKKKKLPNLLKISDLKQLNDSIDDAADNRDDLMNLSNNVIDDCDNDVDDDDDDDDDDNRSPPILTANYVCPICPSIFTINRQELFNHLEQIHPEQSSLLCGICLYQANTIDLLKQHIDICKKQNQLLTRYYCKICLYGDDNMIILEKHILIHKFLLDNCRKSMKIFDPIDYIELNNNYQYGNRSPNTKLLICNQCGIDNFLSYNDYSQHCRQQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLLQHFNKIHNNSKQQQQQQHQQDFMQQKFQAFDFQSVKQSFMRQELLEQTTNKPNDDDDDGGPKEIDVNSDLYTNIITNYTPPPLQQQQDNGEYKCTKCNKGFFKRTLLKKHRKNCRPRSQKDLLTRCKTCSRIFKDRQSLSKHLINYHTKYTCEICGQCVESKCEIITHIRFQHPQNQLICKLCKNILRNQYELKIHELNHLNSYVCQFCGDCLDNKIKLKMHILSLHRKILNLSCGICLKLFENQIKLREHVKLQHYNNIQSLTTCPVCGKNYGSKWKTYDHLNKSHGRIFKGCKICLELFDNDTQLQIHYKQSHPNNNNNHNNQQQQQQQKQQSDSDHDESDEETPPPPTTTTTVVKKQQQKLTNPQQNSSKRTVYVNSNDPSYCEICLKTWPAKKHLWQHYIRCHKQVAATVCGICLKTNHNYIDLQKHLKQQHPSLLYGQGFGSNFICRICGRYHNASSKLKLHMAIHENFNWDLLNQNNDNDNNDNTTTNADNKEAKTTNGYGSGGGSSSSSSSSSSSNNSTTSNNNNDDDDDDDNINYESLIEQVECSSNDNTQTTSDDDDDDVVEKNDSDSDTDDSSSDNDESSNDNESLVSDNNLLDSPEQQSQQQQHDDGESDNDLDDDINDRDIFNTKTEELHSAIQSIEEQFIDDDDDDDDVDDDIEIEDYCDLQEEQQLQKQPPPPLLNDNEIESAVGSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -