Basic Information

Insect: Meloe dianella
Gene Symbol: pita
Assembly: GCA_028455855.1
Location: JAPTHL010000008.1:7025914-7030871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0006 0.036 14.1 0.3 1 23 210 232 210 232 0.94

2 10 1.3e-06 8.1e-05 22.5 1.3 1 23 238 260 238 260 0.98

3 10 5.4e-06 0.00032 20.6 2.3 1 23 266 288 266 288 0.98

4 10 0.051 3.1 8.1 0.1 1 23 294 316 294 316 0.92

5 10 4.5e-05 0.0027 17.7 0.8 1 23 322 344 322 344 0.95

6 10 9.1e-05 0.0055 16.7 1.9 1 23 350 372 350 372 0.97

7 10 0.00026 0.015 15.3 5.4 1 23 378 400 378 400 0.98

8 10 2.4e-05 0.0014 18.6 1.4 1 23 418 440 418 440 0.95

9 10 0.013 0.77 9.9 0.2 2 23 446 467 445 467 0.97

10 10 9.7e-06 0.00059 19.8 0.3 1 23 473 495 473 495 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0006	0.036	14.1	0.3	1	23	210	232	210	232	0.94
2	10	1.3e-06	8.1e-05	22.5	1.3	1	23	238	260	238	260	0.98
3	10	5.4e-06	0.00032	20.6	2.3	1	23	266	288	266	288	0.98
4	10	0.051	3.1	8.1	0.1	1	23	294	316	294	316	0.92
5	10	4.5e-05	0.0027	17.7	0.8	1	23	322	344	322	344	0.95
6	10	9.1e-05	0.0055	16.7	1.9	1	23	350	372	350	372	0.97
7	10	0.00026	0.015	15.3	5.4	1	23	378	400	378	400	0.98
8	10	2.4e-05	0.0014	18.6	1.4	1	23	418	440	418	440	0.95
9	10	0.013	0.77	9.9	0.2	2	23	446	467	445	467	0.97
10	10	9.7e-06	0.00059	19.8	0.3	1	23	473	495	473	495	0.97

Sequence Information

Coding Sequence: ATGGAAAATCGTCAAGATATTCTACGCACAATGAAAATCTGTCGATTTTGTTTATGTGAAGATAATTCATTGACAAATATGTATGGGCGCCAAAATAAAGACGGCCATAATATGAGACAAACTCCACTCCCCCTACAGCTAATGGCTTGTGTTGCTATTGAGGTATTTGAAAATGATGGTATGCCTCAAATGATATGCAATTCATGCCGTTCACAAACAATACAAGCGTACAAATTTAAAACTAATTGTAAAAAAGCCGATGATGCTTTGAAGTTTTATTTAGCAACTGGTAATTTAATAAAACCATTGAATCAAGATGAAATTCATCAACAACAACCGATTACAAATAATCAAATTCCAACAAAAACTCCAACTAAACGTAATGCTGAAAAATTAGAAGGATCACCACAAGCTAAAAAACAGAAAGATCCATTAGATGACAATGAAGAAGAGTATTTGATTGATCATAATGTTAATGATGACGATGTAAATTCATCTGAAAATAATGCACAGAATTCAGATGGATATGATGATACAACAGAGGAAAGAGATGATTGTTTTATGGATTTAGAAGATGAATCTGTTTTAAATCCAACATTAAAAGTGAATCAAGTAAAAACTGATGTTTTCCCATGTCCACATTGTGATCGTTCATTCCCGTTAAAACAATTATTAGATTTACATGTAGCAAATCATGGTAGAGAACGTAATTTTAATTGTGATGAATGTGATAAGGCATTCTTTACAAAATATGATTTAAGTAAACATTTATTAACACATACAGGTTGTAAACCATATACATGTGTTGTTTGTCAGAAATCATTTTCAAGAGAATCATTATTACATCGTCATGAAAAAGTACATATTGATGCACCAAAATATTTATGTTCAGAATGCGATCGTACATTTCTAACTGGTGAAGATTTAGATGCACATACAGCTAAACACAAAAAGAAGCGACCGTATATGTGTAAAATTTGCCAGAAGAGTTTCGTATTTAAACAGGGTCTTGAACGGCATGAAGTCAGTCATAATAATGTGAAACCACATAAATGTAATTATTGTGAAGCTAGTTTCACATCGGCAATCAAATTAACACGGCATGTTACATCACATGCTGGTTTAAGACCTTATCCATGTAAAATTTGTAGTCGAACATTTTTATTAAGTCATCATTTAACAAGACATATGCGTAGCCATTATGCAGCACAACAATCCGCCGATCCAACTGGTATATCACCAATTGGCCAACATAAATGCGATATATGTAGTATGTCATTTAAACGTAAAGATTCATTAATTAATCATAGTGCTATACATTCAATGGTTAATTTGAAATGTGTTATATGTAATACAGAATTTGATAATGTTGCAAAAGTTAAAGAACATATAACAACACATTTATCAGATTTACCATATCCATGTGATAAATGTGATTATTCATTTGAAACACAAGAACAATTAGAAGATCATGAATTAAAACATGCTGAAATGGAATATgaagaacaaattgaacaagaagttattgctgaagctaaaaaagcagctgaacgtaatgatgatgatgatgatgatgatgatgatgatgatggtggtggtggtgaggtaaattcagattattcaggtgatgatattgctgaatttacaataacaaatattgataatccagaagttgtgagacgatcaaaacgtataacaaaaattaaaaATTATGCTGAATTCTTACAAGGTGAATTAGGTTCAGATTTAGAAGAAAATCATGCAGATGAAAATGTAGAAGACAAACAACAACTACAAGTGAAACAAGATAAAAGTGATGATAGTGTAAATGATGAAATTGAACAAAATGAAAATGATACACAATTATTACAAGATGATGAAATTAAACCAATTGTTAGAAGTGAAGGTACAAAAGTTTATACAAGAAAAAATATAAGTGAACGCCCAAAAATTTTACCACAAATGAATTTATCACAAATAACAACATCACCATTATCAAAAATAACACAATCACCAATAAATACAACAATTGAACAATTAAAAACAAAAGATATTAATAAATTACCCGATAAAGAAATATTTAATATGAAAATTGGTGATAAAACTGTTACAGTACAAAAATTAGTATTAACTAAAGAACAAATGAAAGCAATGGCAAGAGAAGGTAAAATTGAAAAGAAAGGTAATACGTTTTTATTAAAGAAAAGTCCAGGACAAACATTTCAAACAGTTAATATTAATTCATTTATTGCCAATCAAAAAACTAGTACACCAATTAGATCACACATGAAGAAAACTTATCAACGTAAAACGAATAATGCAACTACAGATGGAAATGATACTACGAACAATACAACGATCAATTTTGATGTTTCAGCAATTACAAATAATGATTAA
Protein Sequence: MENRQDILRTMKICRFCLCEDNSLTNMYGRQNKDGHNMRQTPLPLQLMACVAIEVFENDGMPQMICNSCRSQTIQAYKFKTNCKKADDALKFYLATGNLIKPLNQDEIHQQQPITNNQIPTKTPTKRNAEKLEGSPQAKKQKDPLDDNEEEYLIDHNVNDDDVNSSENNAQNSDGYDDTTEERDDCFMDLEDESVLNPTLKVNQVKTDVFPCPHCDRSFPLKQLLDLHVANHGRERNFNCDECDKAFFTKYDLSKHLLTHTGCKPYTCVVCQKSFSRESLLHRHEKVHIDAPKYLCSECDRTFLTGEDLDAHTAKHKKKRPYMCKICQKSFVFKQGLERHEVSHNNVKPHKCNYCEASFTSAIKLTRHVTSHAGLRPYPCKICSRTFLLSHHLTRHMRSHYAAQQSADPTGISPIGQHKCDICSMSFKRKDSLINHSAIHSMVNLKCVICNTEFDNVAKVKEHITTHLSDLPYPCDKCDYSFETQEQLEDHELKHAEMEYEEQIEQEVIAEAKKAAERNDDDDDDDDDDDGGGGEVNSDYSGDDIAEFTITNIDNPEVVRRSKRITKIKNYAEFLQGELGSDLEENHADENVEDKQQLQVKQDKSDDSVNDEIEQNENDTQLLQDDEIKPIVRSEGTKVYTRKNISERPKILPQMNLSQITTSPLSKITQSPINTTIEQLKTKDINKLPDKEIFNMKIGDKTVTVQKLVLTKEQMKAMAREGKIEKKGNTFLLKKSPGQTFQTVNINSFIANQKTSTPIRSHMKKTYQRKTNNATTDGNDTTNNTTINFDVSAITNND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01366545;
90% Identity: -
80% Identity: -