Mdia008451.1
Basic Information
- Insect
- Meloe dianella
- Gene Symbol
- -
- Assembly
- GCA_028455855.1
- Location
- JAPTHL010000019.1:2521346-2523991[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.54 32 4.8 0.3 3 21 7 26 5 27 0.86 2 15 0.023 1.4 9.2 1.6 2 21 33 52 32 53 0.94 3 15 1.5 92 3.4 0.5 1 11 115 125 115 135 0.89 4 15 0.0057 0.34 11.1 2.4 2 20 274 292 273 294 0.94 5 15 2.1e-05 0.0013 18.7 0.4 1 23 314 336 314 336 0.98 6 15 2.2e-05 0.0013 18.7 1.7 3 23 348 368 346 368 0.97 7 15 0.44 26 5.1 1.0 1 14 399 412 399 420 0.80 8 15 3.4e-05 0.0021 18.0 1.0 1 23 426 448 426 448 0.97 9 15 0.00037 0.022 14.8 1.5 1 21 454 474 454 475 0.94 10 15 5.6e-05 0.0034 17.4 1.4 1 23 479 501 479 501 0.97 11 15 2.2e-06 0.00013 21.8 2.8 1 23 507 529 507 529 0.98 12 15 0.00035 0.021 14.9 7.0 1 23 535 557 535 557 0.99 13 15 1.1e-06 6.9e-05 22.7 0.4 1 23 563 585 563 585 0.98 14 15 1e-05 0.0006 19.7 0.2 1 23 589 611 589 611 0.98 15 15 0.00021 0.013 15.6 0.1 1 23 619 642 619 642 0.97
Sequence Information
- Coding Sequence
- ATGGCTACCATAATAACCTGTCCATTATGTTGTAATGAAGAATTCAACACAATCAACGAATTAAAACAGCACCTTTTACAAATTTTAGAAAATCTAAAATGTACAAATTGCAATAATTGCTATAAAAATTCCATTGATTTCATACAACATTTAAACGATGATAATTGCCAACGGAATACAGAATTAGTTGATACGAATATTGAAAATGTACTTAAATTTGAACACCAACAACAATCCAATCATGACGATAATGATGAGAATTGTAATAGTTTAGAATTGTTCGATAAATCAATTTTAACAAATGATGATAATAATGAAGAGATCGATGAGAATTTATGCAATTATTATTGTCAAATGTGCGGTGTGCATTTCAATGAGATTGAAGAACATTTGAAGGATTTCCATGAAGGACAAGAGATCATCGTGGAGGACGACCATAATGAAGCTACAATGGAGGTCGACCAGCCGAATCCAACAACAGAAACCATCTATTTACTAgataattcccaattaattttcaataatgatgaaaataacgataaaaaagaaagtgctattatcaaacaagatgataatgatgatgatgatgatgatgagaatcatcaaaaagaaacaattaatgaacaaaatataaaagataaagatggtcgtttatatacacggaaatttgtgaaaatcgataaattctggttggaatcaacaaaagattataaactaccaataatccaacaatatataattgataatgatgaagtgaaaaaattaacaaataatgattatgataaaattgatgataaaacaacaataattgaaatcaatcaatgtcctgattgtaatttattatttacaaatttcgataattacaaaaaacataaatgtgataatgatgatgatgatgatgatgatgatgatgatgacgctaatagtaataacgaaaaattcgaatgtaatgattgtaatttaatattcaacgtattagatgatttacgtaaacatttaaaacaacacaacaatgataaACAAAAGAAAACATTGGTGAATTGTGAAATATGCAATACAACATTTTCAACATTTAAATCATTACGTTTACATCGACGTATGCACGATCCTGTAAAAGAACGTGAAATCGAAGCACCAGTTAAATACGATATAAACGATATGATTAAAAATGAAGATCAATCATTGCGACCGATGTTCTTTTGTAAAATTTGCAATAAAAACTATGATAAACAATATGAAGATGTACATATGGAATCACATAATAGTATCGATGGTTATAATTGTGATACATGTAATCGTAAATTTTTTAGTCAAGCCAATTTAGAGATGCATTTAAAAGCCCATTCGAATAATAAGAAGTTCGCATGTTCatattgtaagaaaccattcattacatatgaatcattaaatgaacatttatgtaaagaacgtatgtatgcttgtcaatattgtggacgacgtttcgtacgaccacatgagaaagtcaaacatgaacgtatacatactggtgagaaaccgcatgtttgtgaaatatgcggtaaagcattccgtgttaattactgtttaacattacatttacgtacacatagcggtgctagaccatatcaatgttttacatgtggtaaacgtttTAAATCGCATAGTGTTTATAATCATCATCTATTAACACATTCAGATACACGTAATTATAAATGTCCATATTGTCCAAAAGCATTCAAAACTAGTGTACAATTGGCTGGACATAAAAATAGTCATATTAAACCGTTTACATGTACTGAATGTAATCGACCATTTGCATCATTATATGCTGTTAGAGCACATATGGAAACGCATAAACGCGATAATAATTTACGTTATGAATGTTGGATATGTGGTGCTTTATATTCTAGAGCATTTGCATTAAGAGATCACATGAAACAACAACATCAAGATTGTAATAACAGTAACAACAACAACAATAATAATGATAAAACCAAAGTTTTAAATGTTGAAAATGAAATAGATGCGGCTAATTCGATTTTAGTTAAAGAAGATGATATTATTTTACGTTTAGATGGGGCGACCAACATCGAAATTATTGAAAATGACTGTAGATAG
- Protein Sequence
- MATIITCPLCCNEEFNTINELKQHLLQILENLKCTNCNNCYKNSIDFIQHLNDDNCQRNTELVDTNIENVLKFEHQQQSNHDDNDENCNSLELFDKSILTNDDNNEEIDENLCNYYCQMCGVHFNEIEEHLKDFHEGQEIIVEDDHNEATMEVDQPNPTTETIYLLDNSQLIFNNDENNDKKESAIIKQDDNDDDDDDENHQKETINEQNIKDKDGRLYTRKFVKIDKFWLESTKDYKLPIIQQYIIDNDEVKKLTNNDYDKIDDKTTIIEINQCPDCNLLFTNFDNYKKHKCDNDDDDDDDDDDDANSNNEKFECNDCNLIFNVLDDLRKHLKQHNNDKQKKTLVNCEICNTTFSTFKSLRLHRRMHDPVKEREIEAPVKYDINDMIKNEDQSLRPMFFCKICNKNYDKQYEDVHMESHNSIDGYNCDTCNRKFFSQANLEMHLKAHSNNKKFACSYCKKPFITYESLNEHLCKERMYACQYCGRRFVRPHEKVKHERIHTGEKPHVCEICGKAFRVNYCLTLHLRTHSGARPYQCFTCGKRFKSHSVYNHHLLTHSDTRNYKCPYCPKAFKTSVQLAGHKNSHIKPFTCTECNRPFASLYAVRAHMETHKRDNNLRYECWICGALYSRAFALRDHMKQQHQDCNNSNNNNNNNDKTKVLNVENEIDAANSILVKEDDIILRLDGATNIEIIENDCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -