Basic Information

Gene Symbol
RCOR3
Assembly
GCA_028455855.1
Location
JAPTHL010000002.1:372277-375873[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.1e-09 1.5e-06 27.8 0.0 3 46 130 173 128 173 0.97
2 3 2.3 1.6e+03 -1.1 0.8 36 44 271 279 271 280 0.88
3 3 1.5e-11 1e-08 34.7 0.2 3 41 378 414 377 417 0.94

Sequence Information

Coding Sequence
ATGGTATTGGCTGAAAAGAATAGTGAGAATGCTAGAAATGGCCGTAGAAGTCGTGGTCCAAGTCCGAATGGTCATGTCCAGGATTCTACAAGCGAAGATGAAAGCTCAGTCCCAGTTGATAAGATTCGTGTTGGACGTGATTACCAAGCTGTTTGCCCTGAATTACAACCGGAACCACAACGGAAACCAGAATTGTTGGCTGATAGAGCTTTACTAGTATGGTCACCGACTGAATCAATACCAGAATCGAAACTGGAAGATTATATAATCTTAGCCAAAGACAAGTATGGTTATAATGGTGAACAAGCACTCGGTATGCTATTCTGGCATAAGCATGATTTAGATAGAGCTGTATTGGATTTAGCGAATTTCACACCATTCCCCGATGAATGGTCTGTAGAAGATAAAGTTTTATTTGAACAAGCATTTCAATTTCATGGTAAAAGTTTCCATAGAATAAGACAAATGTTGCCTGATAAAAGTATCGCTAGTTTAGTCAAATATTATTATAGTTGGAAGAAGACACGATCTAGAACAAGTCTAATGGATAAACAAGCGAAAAAATTAAATACACCAAAAGAGGAGGGTGGTGGGGCATCGGAAGGAGGCTCTGAAGGTGGTTCCAATGAAGATTCCGATCATGATGAAAAGAAGTGGACTATGCATCGTGGCATTCGACGTAAAAGCGGTTCACCAAGTCGTACGGGTCAGCCATCTGACGACAACGCTACTCAGGGTGAGGGTGGCGCGTGTTCTAACTGCGGAGTCGTCTGTACCGTCACACATGTGACATCCAAAGGAGCCCTCTGTAATTCCTGCTATCAACATTGGAGACGAACGGGATCTTTGCGGCCCACATCAGGGCCAACGGGTGGTAAGCGTGGTTCACCACTTGGTGGACGGCATAAACGCAAACCGCCTCGCGGCATGTACATCAACCATGATGATTTGGCTGCGATGGCGTCAGGCACTGCCGGTGTTCTCATGTTAAAAGCAATGGATCGAGAATTAGATTCCCTACAAAGACAAATTCAACAAAATAAACAAAATATAAGCTCGTTGAAACGTAAACATTCAGATTCAATAGAAGATCTCCGTCCAAATAATGATAATTCATCACGTATAAATGCCCGTTGGACAAATGAAGAATTATTATTAGCTGTACAAGGTGTACGTAAATATGGTAAAGATTTTAAAAGTATTGCAGAAGTATTAGGTAATAAAACTGAACATCATGTACACTGGGAAAAAGATAATGGTCCATTACCATCTGATGATAATTCAACAACAGATATTGTTAAAATTGAAATGGACGATTCAAATAATACAGATAATGATGTTATATGTATATCACCAACACCAAGTAATAAAAAAGAAATGAAAAATGGTAAAGTCACACAAATTAGTAAATGA
Protein Sequence
MVLAEKNSENARNGRRSRGPSPNGHVQDSTSEDESSVPVDKIRVGRDYQAVCPELQPEPQRKPELLADRALLVWSPTESIPESKLEDYIILAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQAKKLNTPKEEGGGASEGGSEGGSNEDSDHDEKKWTMHRGIRRKSGSPSRTGQPSDDNATQGEGGACSNCGVVCTVTHVTSKGALCNSCYQHWRRTGSLRPTSGPTGGKRGSPLGGRHKRKPPRGMYINHDDLAAMASGTAGVLMLKAMDRELDSLQRQIQQNKQNISSLKRKHSDSIEDLRPNNDNSSRINARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVHWEKDNGPLPSDDNSTTDIVKIEMDDSNNTDNDVICISPTPSNKKEMKNGKVTQISK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01566170;
90% Identity
iTF_01366259;
80% Identity
-