Basic Information

Gene Symbol
ct
Assembly
GCA_028455855.1
Location
JAPTHL010000130.1:1226741-1250303[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3e-27 4.5e-24 83.9 0.0 2 72 373 444 372 449 0.95
2 3 4.3e-32 8.3e-29 99.0 0.0 2 77 776 852 775 854 0.96
3 3 4.7e-30 9.1e-27 92.5 0.0 3 75 1029 1102 1027 1106 0.95

Sequence Information

Coding Sequence
ATGGACCGACAAACATATGAAAATGAAATTGCTGCCAAAGATAAAGAGatcaatcaattattggaagaagtacaAAGACTCCAAACGACCGTATCAAAATTAAAAGAATCATCAATAACGCAAATATCACGTTTAGAAGATCAATTAGAACAAAAACGACAACATATTATTAGATTAGAAGCGAAATTAGATTCACAAAGGGATTATGATGATCTTAAACGAGAATTAAGTCTGCTACGGCCGGATCTTTCATCAAATCCCGATGTTAAATCAATCGAATTATTATTAGAAAAAGCAAAAGGGGTTGCAAATCCGCCGTCTTCACAATCAGACGCATCCCCAACTATCCCACCACCTACACCACCATCATCATTATCATCAACATCATCCACTACCACCACCACTACATTACCACATCCATTTCATAACGTTGAAACATTCGGTAGTATGTTAGGTGAAGAGATTGTTGCAAATTGGCGTCGTAGTATAGAACAAATATCTTTAAATAATCGTATAATATCATCTCGATCACCATGTACtacagatgcaacaacagctatggcagctgcagtagcagcagcaacagcagcagcaagtggtattGGAACAACAAATACAACAACAGCGTCAACCCCAACATTATCAACATCATTAACAACAACACAAACAATTCCAATAAAATCATCAACACCAATGACTGAATCGATAATAGAGAAATCATCATGTGATTCACTACCATCTAATTGTGATGTTTTCCAACAAAGACATTCACCAATTGAACCATTAATTATTAATGGTAACCCACGTAGTCCAGAAGataataataatcatcatcatcatcatcatttaaataataataataataataataataatataccaataacagcggcgacaatgTGTGCAGTGAATAGTTTCTTACGTAATGATGATACATTAAAAAGTCCATATCGTTTTGATGATCACCATCGATCACCATTTCGTTTTGCTGATGATTTAGGTATTGGCCCGCCTGGTGCAATGGTTGGACGTTTAGGTGAAAGTTTAATACCAAAAGGTGATCCAATGGAAGCAAAATTACAAGAAATGTTACGCTATAATATGGATAAATATGCATCGCAAAATTTAGATACATTACATATTGCTAGACGTGTTAGAGAATTATTATCAATACATAATATTGGACAAAGATTATTTGCTAAATATATATTAGGTTTATCACAAGGTACTGTTTCGGAATTATTATCGAAACCAAAACCATGGGATAAATTAACGGAAAAAGGACGTGACAGTTATAGAAAGATGCATGCATGGGCATGTGATGAACAAGCAATTCTATTACTTAAATCACTTATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGATACTAGTAGTATGCCTCCAACATTTGGACGTCCTGATAATGATTTAACAGAAGAACGTTTAGTACATATATTGAATGAAGCTAACCAATTCCAACATCTAAAACCAAaagatagtcatagtaatgatgatTCAAAATCACCACATGGACAATGTTTAAGTCCATTTTCAAGGGATTCCTCACAGAATCGTCGATTGAAAAAATATGAAAACGACGATATACCACAGGAGAAAGTCGTACGGATTTATCAAGAAGAATTAGCCAAATTAATGGGTAGACGAATGGATGATCCACGTAATCCACGTGATACATTTCCTAGTATGTTCTTTCCACAATTATTTAGTGGCGGTCAAATGGATCGAACACAAGAAGAGATACGTATAGCATTAGATGCTTATCATCGTGAAATTGTTAAATTAAATCAAAATCCAAATACTGGACAAATACCAAATTTAGGTTTATTAGCATTACAACAACAAGCATTAGCACAACATCAAAATTTATCAAATGGTGGTGTACAAGATTTATCATTACCAAAAGATAAAACGAAAACATTAAATGGTAATGATGATAAAGATATTAAGGATACATCATCAATAAATACAACAACAACAACAACAACAAATGATGAAAATTTAAGACATTCCGGTAGTGCGTTTAGTTTGGTTCGACCAAAAATTGAACCTGGTACTACAACACCACAACAACAACAATCTAGTGGTTCAACAGCATCAAGTCCATTAAGTAATACAATTTTACCACCAGCAATGACACCAAATGATGATTTTAGTGGATCAACAGTTGCTAGTCCATTACAAAGGATGGCATCAATAACAAATTCATTAATATCACAACCACCAACACAAACACATCATACATCATCACAACGTCCATTAAAAGCTGTATTACCACCAATTACACAACAACAATTCGATCAATATAACAATTTAAATACAGAAGATATTGTTAAAAAAGTTAAAGAACAATTAAGTCAATATTCAATTAGTCAACGTTTATTTGGTGAATCAGTATTAGGTTTATCACAAGGTTCAGTTAGTGATTTATTAGCAAGACCAAAACCATGGCATATGTTAACACAAAAAGGACGTGAACCATTTATACGTATGAAAATGTTTTTAGAAGATGATAATGCTGTCCATAAATTAGTTGCTAGTCAATATAAAATTGCACCAGAGAAATTAATGAGAACTGGTGGTTATGGAGGTGGTAGTTCTATTGGTAAACCAATACCACCAACACCGAAAATGTTAAGTGAAGTTGCTGTTGCTGCTGGTTTAATCAATAAAATACAAGAAAATCCAAATTTATTACCACCATCATTACAAATCGGACCACTACCACCAAATCCAAATCTAcaacaacaacaacaacaacaaagtagtggtggtggcggtggtggtagtaatagtggaggaggaggaccaccgccgccaccaccaccaccaccaccaccaatgttaCTAACACCACCAGGTGTACCACCCCATCATGCTATTAATCTACAAAATCCTGAACATTTGAAAAAATCAAATCCAAGTCCACATAGTACTGGTAGTAATAGTGGTAGTAATACAACTGGTTTACCACCACATTCACCAATGCCACAACATCAAGTCACATTAAGAAATATGCATCAACATATGTCACCTAGTGTCTATGAAATGGCTGCATTAACACAAGATTTAGATACACAAGTGATAACAACTAAAATCAAAGAAGCATTATTAGCTAACAATATCGGACAAAAGATTTTTGGTGAAGCAGTTTTAGGATTATCACAAGGTTCAGTTAGTGAATTATTATCAAAACCAAAACCATGGCATATGTTAAGTATAAAAGGTCGTGAACCATTTATACGTATGCAATTATGGTTAAATGATGCACATAATATTGATCGTTTACAAGCATTGAAAAATGAACGACGTGAAGCAAATAAACGTCGTCGTAGTTCTGGTACTGGTGGACATGATAATAGTTCGGATACATCATCAAATGATACATCCGAATTTTATCATTCAAATTCTCCAGGACCTGGACCAACATCAGCAAAAAAACAACGTGTATTATTTAGTGAAGAACAAAAGGAAGCATTACGTTTAGCATTTGCATTAGATCCATATCCGAATGTGGCAACAATTGAATTCTTAGCTGGTGAATTAGGTTTAAGTAGTCGCACAATAACAAATTGGTTCCATAATCATCggatgagattgaaacaacaagtaccacataacaacaacaataataataacaataataataataataataataataatgatctaccaccaacaagagatcaagcaacacaacaacaacaaggaccatttgatcctgTACAATTCCGACTGTTATTAAACCAAAGATTATTAGAACTATCAAAAGAACGTATGGGATTAAGTGGTGTACCATTACCATATCCACCATATTTAACAACAACAAATACAAATCTAGCAGCATTAATTAGTCGTGGTTTATTACCAGCTGCTGCTGCTGCTGCTGCAGCCGCTGATGTGGATCTAGCCGCATTAAATATTGCTGTTAAAGAACAAATGAGCGGTTTGGATCTATCAATGACAACATTGAAACGTGAACCAAATGATTATGATGATGACGATGATGTTGGTAGTAATGTTGGATCTGAAGATTCCAATATTAGTAGTAATCATAGTTTGATTAAAACTGAACATAAGGAACAACCTGTACATCAATTACCACAACAACAACAACAACAACACCACCAACACCAACAACAACAAGGTCGTTCGAGTCGAAGGAAACCTGTAGCACCACAATGGGTAAATCCAAATTGGgaagatgataataaaaatgataataaaaataataatagtgatgaagttataataaatggtgtatgtgttatgcaaacaagtgatgattatggacgtacaaatcgtacaaatgaagaaacaatacttattgaacccacacctgttctagatcatcatcatcatcatcatcatcagcatcatcatcaacatcattatgatgatgatgatatacatagtgatacatcatcaattagtaatgataatgataacgatcatgataatgaacgaacaacgaatagtgataataatattaaaattgaacaagaacaacaacctgatgaaatcgatgatgatattgatgatgataaagatgatgataataaagataatgaagatgaacggtgggattattaa
Protein Sequence
MDRQTYENEIAAKDKEINQLLEEVQRLQTTVSKLKESSITQISRLEDQLEQKRQHIIRLEAKLDSQRDYDDLKRELSLLRPDLSSNPDVKSIELLLEKAKGVANPPSSQSDASPTIPPPTPPSSLSSTSSTTTTTTLPHPFHNVETFGSMLGEEIVANWRRSIEQISLNNRIISSRSPCTTDATTAMAAAVAAATAAASGIGTTNTTTASTPTLSTSLTTTQTIPIKSSTPMTESIIEKSSCDSLPSNCDVFQQRHSPIEPLIINGNPRSPEDNNNHHHHHHLNNNNNNNNNIPITAATMCAVNSFLRNDDTLKSPYRFDDHHRSPFRFADDLGIGPPGAMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAILLLKSLIPKKDNFSSGKDTSSMPPTFGRPDNDLTEERLVHILNEANQFQHLKPKDSHSNDDSKSPHGQCLSPFSRDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDPRNPRDTFPSMFFPQLFSGGQMDRTQEEIRIALDAYHREIVKLNQNPNTGQIPNLGLLALQQQALAQHQNLSNGGVQDLSLPKDKTKTLNGNDDKDIKDTSSINTTTTTTTNDENLRHSGSAFSLVRPKIEPGTTTPQQQQSSGSTASSPLSNTILPPAMTPNDDFSGSTVASPLQRMASITNSLISQPPTQTHHTSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGGSSIGKPIPPTPKMLSEVAVAAGLINKIQENPNLLPPSLQIGPLPPNPNLQQQQQQQSSGGGGGGSNSGGGGPPPPPPPPPPPMLLTPPGVPPHHAINLQNPEHLKKSNPSPHSTGSNSGSNTTGLPPHSPMPQHQVTLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGTGGHDNSSDTSSNDTSEFYHSNSPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHNNNNNNNNNNNNNNNNDLPPTRDQATQQQQGPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLTTTNTNLAALISRGLLPAAAAAAAAADVDLAALNIAVKEQMSGLDLSMTTLKREPNDYDDDDDVGSNVGSEDSNISSNHSLIKTEHKEQPVHQLPQQQQQQHHQHQQQQGRSSRRKPVAPQWVNPNWEDDNKNDNKNNNSDEVIINGVCVMQTSDDYGRTNRTNEETILIEPTPVLDHHHHHHHQHHHQHHYDDDDIHSDTSSISNDNDNDHDNERTTNSDNNIKIEQEQQPDEIDDDIDDDKDDDNKDNEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00813505;
90% Identity
iTF_00987030;
80% Identity
iTF_00987030;