Basic Information

Gene Symbol
ARID5B
Assembly
GCA_028455855.1
Location
JAPTHL010000008.1:5572718-5579448[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.41 6.1e+02 0.5 0.0 37 52 125 140 120 163 0.84
2 2 1.8e-26 2.7e-23 81.7 0.0 2 89 234 319 233 319 0.94

Sequence Information

Coding Sequence
ATGTTTCGATGGTTCACACTCGACTCATTTCCAACTGATGAGGTTCTAGCAATTTCCGAGAAAGTTGTTTTACGTGTAGAAGATTTAATCACATGGATAACAGTAGATGCTGAATGGACATGGGGTCGATTAGCTAAATGTGAAAAAGATGTAAAAGAAGCACCACCAGATATTGATGAAAATAAATTGACGACAATTAGTACACTATCAGATAGTTCATTGGATTTTGGTGATGTTGAAAAAGAACGAAAAACATTAGATCACAACACAGAAAATGATGGACCATTAGTTATAATATTAAGTTATCCACGTTACTGCCGTTATAGAGCAATGATGAGACGTTTAGAAGGTGTTGAAGATGAATATTTGAAATATAAAATTGTTAGGGCACTTGGTGGTTTTGCAGCATGTACAAAAAATACACGTGTATTATTTTGTAAAGATACATTCGATTATCCAGAATTAGAAGGTCATGAATTGTTATGTAATCATTTAGCACCGAAATTAAAAGGTCGACCTAGAGGTAAACGGAAAAAACGTAGCGTATCACCAGGTTCAGAAAGTAATGAATCAGAATCATCAATTACAAATATTGTTGTTTTCCCTACAATATCAGAGAAAATCACAACAGAATGCCGGAATGGTTTACGTTGTGATACAAGTTTAAGACGTAGTACAAGAACAATTGAGAATAGTGAAAGCAAAGAGTTTTTAAAAGAATTAAGTATATTTATGAAAAAACATTATACACCAATAGGCAAAATACCATCATTAGGTTATAAAGAAATTGATCTCTATTCATTTTATACAAAAGTCCAAAAATTAGGTGGTTATGATTCAGTAACGGCAAATCGTTTATGGAAATCAATTTTTGATGATATGAGCGGCCATCAAAATAGTACTAGTGCTGCTACAGTTATCCGACGACATTATGAACGATTTCTATTACCATATGAACGGCATGTTAAAGGTGAAGAACATAAACCATTGCCGATATCTGAACGGCGCCGACTGAAAAGCAAAAATGGCAGTAGTACAAGTGATGCTGAAACTAGTGAAAGTACATCGAGAAGTGGCAACAGTACACCGATACCACAAATTCCCGTTACACCCGTTGAAAATAAGGAATTTAATATTCAGGTAAAAACTGAAAGTAAAACATCATCTTTGCGTAGTATACGTGTTAAATCTGAACGACAAAAAGAGAAACAAACTGACAAAACTAGTGAAATTGTTAAAATTGAAAATGAACCAGAGGATATTACGAAAACTGAAACTAATTTAATAAAACCTGAAAAGGATATTGAACCATTAATGACAGCAATTGCACCAATTGTACAGAAATTACCACTAGAAAAATCACCATCACCAGTTGAAGGTAAAGAAAACTTATTACCAATAATAGAAACTGGTGATATACCACAAACAAGAAGTAAAAGTCCTGATATTATTGAGGTGCCATATAAACCAAAATCACCAGAAATCATCGATTTAGAAAAAATAAATATAGAAGATCAACAACAACAAACATTTTTGAATGATATGAAAAAAGATAAATTGGATATTTTAAAAGAAGGTGGTTTAGAAGTAACACCGATACGAACATTTATATCACAGTCACAAATAAAAGATTTACGGCCATCTGTTATACAACCAACAGGTGTTGTTCATCAAATGCCACCACCACCACCACCACCGCCGCCGCCTCCTCCTCTACCACCTCCTCCTCCTCTACCACCATCCACAACATCCCAATTACCTCAAGCTTTAAACGTTAATCAATTAACAAATCAACAACataataataataataataataataataataataataataataatagaataaatccgcccaattATAAAAAAATACCATATATGAATGGTATTTGTGCACCACCGAAAGTTTTACAATCAAAATCGATTTATTCATATACAGAAAAAACAGTTTATGGTAATCCAAAAGAATTTGATTTAACAACAATGAATTTACCGAAACATAATGAGCCATCAACACCACCACCACCACCACCAAGACCACCAACATCACGACAATTTCCATGTGATATCTTAGATTTAAGTGTGGCAAATTTTAAAAAACAACAACATCCAATAGAAATAATGAAAATTCCAAATTTAATTAATCATAATCACAATCACAATCATCATTATATGAATCATCATTATCAACAATTAAAACATAGTTATAATTCAACATACAATAAACCACAAACGTATAATCATTTGCTTGATGGTAGTCGGATAGGTTCTAATGTTGAAATAACATTAGTTAATAATAATAATCATCATAATCATAACAAATCGAATAGTATTCAAAATCATGCAAATAAATACATCAACAGTATACCATCATCAATACCAGCAAATCATAATCATTACAATCGGTATCCACAAAAACGACCATCGAGTGAGATTTATACAAATCAAAAAATACCAAGATTAGAGGACAAATTGAATAAATCGAATCTTTTTACCGCATTACCACATTCGACTAGAGAAATGAAATATAATGATATaccaccacatctctataataatcataataatagtggtggtagtagtagtagtagtagtagtagtagtggcggtggcggtggtggtggtggtggtggtggtggtggTTTAAAACCAGATTATAATTCATTAATGAAAGTCCCATTACCACCGCCCCCAATACCACCGTCACCACATCATACACACAATAATACAAAACCGTCAATACCACCGCCATATTTATCACAATTATATGATGGTGGTAATAAGAGTTTACCATCGCCGTATTTGCCATTTTTAGATCCATTTTATTATTTATATTCACATAATGCATTAAATACAACACAAGCAGCACCAGCAGCACCACCGCCACCACCGCAAATTCTACCATTTCCATCACAGGAACAATTGAAATTTTATAGTGATTTAATGGCACACAATTCCCGTTTAAATTTTCCATTCCCTATAAATCATCCATCACCATCCGATCATTTAAATAATTATAAAAAATCTTAA
Protein Sequence
MFRWFTLDSFPTDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCEKDVKEAPPDIDENKLTTISTLSDSSLDFGDVEKERKTLDHNTENDGPLVIILSYPRYCRYRAMMRRLEGVEDEYLKYKIVRALGGFAACTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSITNIVVFPTISEKITTECRNGLRCDTSLRRSTRTIENSESKEFLKELSIFMKKHYTPIGKIPSLGYKEIDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLPYERHVKGEEHKPLPISERRRLKSKNGSSTSDAETSESTSRSGNSTPIPQIPVTPVENKEFNIQVKTESKTSSLRSIRVKSERQKEKQTDKTSEIVKIENEPEDITKTETNLIKPEKDIEPLMTAIAPIVQKLPLEKSPSPVEGKENLLPIIETGDIPQTRSKSPDIIEVPYKPKSPEIIDLEKINIEDQQQQTFLNDMKKDKLDILKEGGLEVTPIRTFISQSQIKDLRPSVIQPTGVVHQMPPPPPPPPPPPPLPPPPPLPPSTTSQLPQALNVNQLTNQQHNNNNNNNNNNNNNNRINPPNYKKIPYMNGICAPPKVLQSKSIYSYTEKTVYGNPKEFDLTTMNLPKHNEPSTPPPPPPRPPTSRQFPCDILDLSVANFKKQQHPIEIMKIPNLINHNHNHNHHYMNHHYQQLKHSYNSTYNKPQTYNHLLDGSRIGSNVEITLVNNNNHHNHNKSNSIQNHANKYINSIPSSIPANHNHYNRYPQKRPSSEIYTNQKIPRLEDKLNKSNLFTALPHSTREMKYNDIPPHLYNNHNNSGGSSSSSSSSSGGGGGGGGGGGGGLKPDYNSLMKVPLPPPPIPPSPHHTHNNTKPSIPPPYLSQLYDGGNKSLPSPYLPFLDPFYYLYSHNALNTTQAAPAAPPPPPQILPFPSQEQLKFYSDLMAHNSRLNFPFPINHPSPSDHLNNYKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-