Basic Information

Gene Symbol
Arid4b
Assembly
GCA_028455855.1
Location
JAPTHL010000136.1:568024-576292[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-28 1.3e-24 86.0 0.1 1 89 566 651 566 651 0.95

Sequence Information

Coding Sequence
ATGGCAAAAAATTCAATTTTTACTTACGATACCTTGGTCCATGCGACCGCGGGAGCTACGGGTGGTCTTGTGGCAATGTCTGTGATGTTCCCTTTAGAAACAATCAAATTCCGTTTGCAATTGGAAGATTGTAATTTACAAGACAAAACTGTACTTGAGTCACTCATTTATATTTTTAAAACTGAAGGAATTGGGGGTTTATATCGTGGAATTCGGCCAGTTCTTGTCAGTTTAGGTGTTTCAAATTTCATCTATTTTTATACATTTCACGGTTTAAAATCATTAAGAACGAGAAAACTCGGCAATGAAACCCAAACTGATTTAATACTGAGTACAATAGCTGGTATTTTTAATGTTTTACTAACAAATCCATTGTGGGTTGTAAATAATCGTTTGAAAAGTTCAAACGATTTACCATACTCAGGTTTAATTGATGGTATTATCCATGTAGGGAAAACGGAAGGTGTTAAATCGTTATGGTCGAGTATAGGACCATCATTATTATTAGTATCAAATCCAACGATACATTTTACTGTTTATGAAGCCTTAAAACGCCGTATATCAGCTAAAAGTGCTTTGGAATTCTTTATTATTGGTGCTGTGGCTAAAGCAATTTCAACAGTAATAACATATCCAGTACAAGTGGCACAGACAAAACAACGTTGTACTAGTAATGGTATGAATTCAGCTGCATTATTATTAAGTATGATCAAAAAGAATGGGCCTGGTGCATTGTATCAAGGTTTAGAAGCGAAACTATTACAAACTGTACTAGCATCGGCATTAATGTTTATGACTTATGAAAAGATTGCTCAGTTTCAAGTGGACGATCCTCCGTATCTATCGGTAGGTACCGCAGTCAGTGCGAAATATAAAGGAGCATTTTGTGAAGCCAAAGTTAGTAAAGTTACACGTTCTGTGAAATGCAAAATAACATATAAAATGGGTTTGGGTTCGGCTACTGTTAGTGATAATGATGTTAAAGGTACATTACGTTTGGGTCACACTGTACAAGCACGACATGCAGACAAAAAAGAATATGTTGAAGGTGTTATTTCGAAAATTCAAGATTGTAGTCAATATACAGTTGTTTTTGATGATGGTGATATTACAACATTACGTCGTTCAGCTTTATGTTTAAAAAGTGGTAGACATTTCAATGAAAGTGAAACATTAGATCAATTGCCATTAACACATCCTGAACATTTTGGTAATCCTGTAATGGGTGGTCGTCGGGGTCGACGTAATAGACAGTTAAAGGAGGAAAGTAGTGATGGTGAAGGTGAAGAAGAGAATGAACCAGATTTAGAAGGATATACATCAGATATTGGTCGTGTTGTTTCTGTTGAATCAACTGAAAAGAAACGTAACCGTGATAATTGGTTTCCAGGTTTAATTGTCATACCATCTGCACAACCTACAGTTAAAATTAATGTTAAAGATGAATTTCTAGTTAGGTCGTTTAGAGATGACAGATACTATACAGTACCTAAGAAAGAAGTAAGAGAATTTCCAAGAAGTTTAGAAAATCGTGTTGAAAATCACCAAACTGAAGGTGTGGCAAAAGCAATTAAATATCTTGACACAAATGAATTACCAGCTCATTGGGAAAGAAATTCCCTTTTCAACATGCAATCAGTAGATACTGATTCAGATGAAAATTTTACCGATTCCTCCGATGACGAGCCAAATGAAGAGAAAGACAGATTCGTTGCACAACTATACAAATTTATGGATGATTCCGGTACACCATTAAATAAAAGTCCAATGATTGGTAATAAAGATGTTGATCTTCATAGATTATTTCGTGCTGTTAATAAATTGGGTGGTTATAATCGTGTTACAAATCAAACTAAATGGCGAACTGTTGCAAATCATTTAAGATTATCAAATAATACAAATACATATAATCTTGTAAAAAGTGTTTATAAAAGATGTTTGTTGAGTTATGAAAGTTTCTTCAAAACATTAGGCGTAACAATGTTGAATCATACAAGATCAACAAAGAAAAATCGTGGTCGTGCATTAATACgcgataaagatcgtagtacaccagtaaatagtccaaaaccggaaaacgttgatgagattagtgatgataaaagtactaataatagtaataatgctagtagtagtggtaataataataatattattattaataataatgatgaAAAGAAAAAGAAAATTGAAATTAAAAAAGATGATGATAAGAAAATCAAAGATGTAATTGAAAATAGTGATACAAATAGTAGTAGTGATACTACAGATCATTCAGAACCTATACCAAGTACATCAAAAGAAATTGGTCGACCACGACGTTTAGATAAATCTAAAGAAAAGAAACCAAAATTAGAGAAAGCTAAAAGTGTCGAAATTAAAAAAGATGATGATGTTGATGATAAGCAACAGACACGCTCAAAATCACAACTACTTAAAAATAAAGAAATCGATAAGAAAAAAGATATGAAAGGTTCAAATGAGAAATTGAATAAAACACCAAAGAAAATGGATGAGGAAAAGAAACGTGGTCGTAAAAAACTTACATCTGATGATAAACCAAATTCAGAACAATCACCAACAGATAATACACCAAATGGATCAGTTAATGTTGGTGATAAATTAAGAGTTTACTATGGACCAACGCATGAATCAAAAGTTACATATGAAGCTAAAGTTATTGAACTTGATCATGATAATTCAGGGCCTTTATATCGTGTCCACTACACTGGTTGGAATACAAGATATGATGAATGGATTCGAAATATACGTATTGCTGAAAATTTGAGTGCACTCTCTAAAGCTAAACGTTATAAACAaaactcatctacaccaatggcatctacatcatcatcattatctggatcatcttcgtcatcatctacatcatcatcatcatcatcaataaacaataaATCAAGTAATAATAATAAAACACCAAAACGTGGCCGTGGTATGTCAATAACTGGACGTAATGCATCTATTGATATTCCACGATCAACAACACCATCAAGTGTAACATCATCATCAAGTCGTACAAAAACACCACCAACACCAGCAACACGTTCTACAACAAGCCGATTAGCACGACAAGATTACAGTAGAAAAACACGTCGTGCATCTGCACAAACTGATATATCAAATCATTCAGATACAGAATCCGAGATATCTGAAAGTGAATCCGAATTAATACGTACTAGAAGTGGTAGTAAAAATGAAGAGACTGATATTGTGAAAACATATAAAAGGAAACCCGGTAGAAATTTAATTAATAAAATTGAAAAAATGAAGGATAAAGATGATGGTGATATTGAAAAAGATGCGGAAACAGATCGTACAAAACGTGTAATTAAAAAATTGAAGAAATCACCAGAAAAATCAACAGAAGAAAGTGATGATGATGCAATTACACCAAAAGGTAGAGATTTTGATTTGAATCAAATTAGATCAGAATTAAAAGGATTCACTAAACCAATTAAAATTTCTCCTGTAGATACAGGCGATAAAGAAGCATTATCTTCCTCAGATGATTCAAACAATGTTACTACTCCATCATTAATAAAAATTGACGAAACAGAAGTGAAGAAGATTGAAATATCCCCAAGTTCTGAAGATATTTATGAATTTAAAGAACCAGAACCATTTGAATTTGAGTCTCGTACAAAATTAGGAGATGACAAAATGACTAAGAAACGTTTAGTACCAAGATTATTTGAAGATGTTGATAAAAGTCCAAAACGGAAAATAATAAAATCACCAAATAAAAATGATAAAGAAAGTCCCGATATTGATAAGAAACGTTTTAGACGAACGCCATTGAGAAGAACAGAAGAATCAGATGAAGATGATAAGAGAGATGAGGATCCATTTGATAAGTTGGTTGAATCACCATCATTCAATATTTCGAAATCGTCTTCTGAAAAAATTCCTGAAAATAAACAGAAAGTTGTGCGAAATATTTTAGAAGGTCATCTAAGTTTGTTTCGTGAATTACCTGAATCTGTTGATGATTATGGTCAAGATATGGATCTTTCTGATACAGAGTCTCAAACACAGCCGATTTTCTCTAGAGAAGAGGACATTTATTCAGATACTTTTGGTAAATCATCATCACCAGATCGAAATATGATTGATTTGGATATTACATCAAAATCTGATGATTCGAAGAAGGAAAGTTTGGATTTTGAATCATTACGTGAGTCAATAGCAAAGAAAATTGAACGTGCCACATCAAGTGATGATAGTCATAATGATAGTGATGATGATATGATGGTAACACATTCTGCAACCAGTTACCAAGGGAAGAAGCGTAATCTAGAATTaacaacaacggcaacatcatcatcaacattaacaacaacaacaacaccaacagcagctataatagcaactatagaaaaaccacaaattgaagtacaacagtcagaaataaatgaggagtcaatacGTAAAAGTCCACAAATCTCACCAGCTTTACAAGAAACTGATAGTTCATTATTGGAATCAATTTGTTCATCACCACCAGTTTCGATTATAAAACTTGAAGAAAGTACAAAAGTTGATGCGAATATTAAAACAAGTTCAAAAATTGCTGAATCAATTTTACAAAAATTCAATTCAATTAAAAATAATACAATAAAATCACCAAAACAAACTGAATCTGATAATGAATTAGATACAAATAATGAAATTAAAATAACAGATGAAAAACTTAAAACAATTATTGAATCATCTAAAATTGAACTGAAACCAAAACCATCTGAATGTGAAACTAAAAAACAATTATCAACAAAAATTGATCCACCACCTGTTGAATTGAAGAAGAAACGAAAAATTCTCAGTAAAGCATATATTGATGAATCTGATTCAGATAGTAGTGATTCTGAACAATTAGTTATAGCTCGATCTGATGAAGATTCACAAACAAATTCATTAGATAAACCTGATATTAAAGAATATAATAGTAATTTATCTACTGTTCAAATCACTGATGATTCTCAATCACAAGAAGAACAAAGAAATTTTAAATTTGATAAGATTGAAAAAACCTCAACGCCAaagatcaagcaacaacaacaacaacaaacacaacagcaacCTTCAGAACCTGAAAATGGCAAAGAAGAAGAATTGCATTCTTTATTAATATGTGAAGAGACAATTCCAAGGAGTCCAGCACCACCTAATGAAAATTCGAATATGTCGGAACAACAACAACAACAACAACGACCCCCTAAAACAAAATTAGTTCTTGAAATGCCATTTGCTAGTGCTCCTGGTAGTAGTAATAATAAAACAATGTTAATCAATAATAATGAAGTTAATAAAACAACAAATAAACAACAATTACCGCCACAACAACAACAACAACAGCCTGTATGTGTACCAACATTACCGACAATACCAGTGCCAGCTCCACCTCCTCAACAACCTCCTGTAGTGATACCTTTAGATAATCGAGAGGCCGCAGTTGTATTAGATAATACCCCACCTACAACGCCAGAAAGTACAATCAGTAATTTATCACCAAGAGGAGGGGATATAGCTGATCTTTCACCGAATACTGTTGAAAATGAAAGTGGCAAATCAAATGATACTGAAACTGATTTTACACGTAAACGACGGAATTCGTCTGTTAACAAATCATCTCTTTATAGTGAAGACGATTCACAAATAGCTGTTGAAACAAATTCTGCAAAGAAAATTCGTGAAGAAAACACAACGGCAGCAGCTACAACACCTGCAACTTGTAGGAAACGTCGTAGGTCAGCTCGTTGTACAGATGATACACCAGCAAAACGTGGTCGTAAACCATTAAATCGATCTAGACATAACAGTGATAGTGATGATACATCAGAACAATCATTTGGTGATACAGCACCAAATCCAGGATTATCTAATTATGAAAGTAGATCATCACGATCACCAAGGCCATCAAAATACAATTTCTTTGTGGATTTTGATCCTACTTTGGATAGTGCACAAAGGATTGCTGTATTAACACAAAAATTAGTCGACATTAAAAAGACTTATGCTGAAGTTAAAGCGGAATTAGCAACTGTGGAAAGGCGACGAAAGAAAATACGTAAGAGAGAACGCGAAGCATTGAAAGCATCCAAACAGGAACTGGTTTGTGCATGA
Protein Sequence
MAKNSIFTYDTLVHATAGATGGLVAMSVMFPLETIKFRLQLEDCNLQDKTVLESLIYIFKTEGIGGLYRGIRPVLVSLGVSNFIYFYTFHGLKSLRTRKLGNETQTDLILSTIAGIFNVLLTNPLWVVNNRLKSSNDLPYSGLIDGIIHVGKTEGVKSLWSSIGPSLLLVSNPTIHFTVYEALKRRISAKSALEFFIIGAVAKAISTVITYPVQVAQTKQRCTSNGMNSAALLLSMIKKNGPGALYQGLEAKLLQTVLASALMFMTYEKIAQFQVDDPPYLSVGTAVSAKYKGAFCEAKVSKVTRSVKCKITYKMGLGSATVSDNDVKGTLRLGHTVQARHADKKEYVEGVISKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRNRQLKEESSDGEGEEENEPDLEGYTSDIGRVVSVESTEKKRNRDNWFPGLIVIPSAQPTVKINVKDEFLVRSFRDDRYYTVPKKEVREFPRSLENRVENHQTEGVAKAIKYLDTNELPAHWERNSLFNMQSVDTDSDENFTDSSDDEPNEEKDRFVAQLYKFMDDSGTPLNKSPMIGNKDVDLHRLFRAVNKLGGYNRVTNQTKWRTVANHLRLSNNTNTYNLVKSVYKRCLLSYESFFKTLGVTMLNHTRSTKKNRGRALIRDKDRSTPVNSPKPENVDEISDDKSTNNSNNASSSGNNNNIIINNNDEKKKKIEIKKDDDKKIKDVIENSDTNSSSDTTDHSEPIPSTSKEIGRPRRLDKSKEKKPKLEKAKSVEIKKDDDVDDKQQTRSKSQLLKNKEIDKKKDMKGSNEKLNKTPKKMDEEKKRGRKKLTSDDKPNSEQSPTDNTPNGSVNVGDKLRVYYGPTHESKVTYEAKVIELDHDNSGPLYRVHYTGWNTRYDEWIRNIRIAENLSALSKAKRYKQNSSTPMASTSSSLSGSSSSSSTSSSSSSINNKSSNNNKTPKRGRGMSITGRNASIDIPRSTTPSSVTSSSSRTKTPPTPATRSTTSRLARQDYSRKTRRASAQTDISNHSDTESEISESESELIRTRSGSKNEETDIVKTYKRKPGRNLINKIEKMKDKDDGDIEKDAETDRTKRVIKKLKKSPEKSTEESDDDAITPKGRDFDLNQIRSELKGFTKPIKISPVDTGDKEALSSSDDSNNVTTPSLIKIDETEVKKIEISPSSEDIYEFKEPEPFEFESRTKLGDDKMTKKRLVPRLFEDVDKSPKRKIIKSPNKNDKESPDIDKKRFRRTPLRRTEESDEDDKRDEDPFDKLVESPSFNISKSSSEKIPENKQKVVRNILEGHLSLFRELPESVDDYGQDMDLSDTESQTQPIFSREEDIYSDTFGKSSSPDRNMIDLDITSKSDDSKKESLDFESLRESIAKKIERATSSDDSHNDSDDDMMVTHSATSYQGKKRNLELTTTATSSSTLTTTTTPTAAIIATIEKPQIEVQQSEINEESIRKSPQISPALQETDSSLLESICSSPPVSIIKLEESTKVDANIKTSSKIAESILQKFNSIKNNTIKSPKQTESDNELDTNNEIKITDEKLKTIIESSKIELKPKPSECETKKQLSTKIDPPPVELKKKRKILSKAYIDESDSDSSDSEQLVIARSDEDSQTNSLDKPDIKEYNSNLSTVQITDDSQSQEEQRNFKFDKIEKTSTPKIKQQQQQQTQQQPSEPENGKEEELHSLLICEETIPRSPAPPNENSNMSEQQQQQQRPPKTKLVLEMPFASAPGSSNNKTMLINNNEVNKTTNKQQLPPQQQQQQPVCVPTLPTIPVPAPPPQQPPVVIPLDNREAAVVLDNTPPTTPESTISNLSPRGGDIADLSPNTVENESGKSNDTETDFTRKRRNSSVNKSSLYSEDDSQIAVETNSAKKIREENTTAAATTPATCRKRRRSARCTDDTPAKRGRKPLNRSRHNSDSDDTSEQSFGDTAPNPGLSNYESRSSRSPRPSKYNFFVDFDPTLDSAQRIAVLTQKLVDIKKTYAEVKAELATVERRRKKIRKREREALKASKQELVCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00929350;
90% Identity
-
80% Identity
-