Basic Information

Gene Symbol
Xbp1
Assembly
GCA_028455855.1
Location
JAPTHL010000015.1:262722-264435[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-14 2.2e-11 43.2 14.1 2 63 41 102 41 104 0.91
2 2 0.0044 2.7 7.7 1.0 33 55 86 108 84 110 0.88

Sequence Information

Coding Sequence
ATGACGACCACACCAGTTCCAGCAATTTTAAAATATTTAAGTGATAGCAGTAATTACAATTCAAATCAAAATGAGACACCAGTCAGGACGAAGAAAAGGCGTTTAGACCATTTGTCATGGGAGGAAAAAATCCAAAGGAAGAAATTGAAGAATCGCGTCGCAGCACAGACATCACGTGACCGCAAAAAAGCCAAAATGGACCAAATGGAAAAGGCCCTACAAGATTTATTCACCAAAAACGAACAATTATTAACAGAATGTGACGAATTGAAATGTATCAATGAACGTTTAACACATGAAAATGAAGAATTAACTAATCGTCTCAGTACACCATGTCCAAACTCCGCAAGGTCTGGTCATACATTCAGCAGCGTCTCTGACACGACAGCAAAAGACATTGGTATTACTGAAGATTGTATTTGCTTGCCTTCTTTACCGGACCTCCTTGACGAACTCAACAATGATGTCGATATCACGTCACTTGAACAACTCACACAAAGTCTCCTTCAAGATATCGCAAGGGACTTGGAAGATGCTTCTGAAAAGGCAGATTGTCAAGAATCAATCGCTCGTGACCAAAACGTTTCTGAAACAGTGGTGGGGTCGCCATCAAAACAATTGGAATCCAATGGAAGTAACATGTTAAAGGATGATGAAAAACAATCAGATCCTTTAATAAAAGATATATCTGAATATCTTTTATTGCATCACAACTATAGTGCTAAACCGACAGACGAACACAAGAAGACACGACAAAAACAACAAACAAAATCAACGAAATATCGTACAATTAAATCGAAATTTAAACCAAAACCAAAACAGATCTTTCCCAAAATTGATATAAACAACAATAAATTCGCTCCGTATACAATTGCAGAAAATGACGAAAACCAACAAAACATTCTTTATGGAACATTTGATGAAGATTCCAATTGTATAACAATTATCATTGATGATGAGTGTTGTAATCAAACTGCAACAATTTCAAATGATATTATTCTAGATAATAATGATAATAGTAATAATAGTAAGTATTTGAATATTCCATTAGAAAACGATATTGGCAGTTTATCACCAACAAGTAGTTTAAGTTCCGGATATGAATCACACGGATCCCCGGATAGTTTTACAGAAAATCATAATATTTGGGATGATGATGTTTCGGAATTATTCCCATCATTAATGTAA
Protein Sequence
MTTTPVPAILKYLSDSSNYNSNQNETPVRTKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKMDQMEKALQDLFTKNEQLLTECDELKCINERLTHENEELTNRLSTPCPNSARSGHTFSSVSDTTAKDIGITEDCICLPSLPDLLDELNNDVDITSLEQLTQSLLQDIARDLEDASEKADCQESIARDQNVSETVVGSPSKQLESNGSNMLKDDEKQSDPLIKDISEYLLLHHNYSAKPTDEHKKTRQKQQTKSTKYRTIKSKFKPKPKQIFPKIDINNNKFAPYTIAENDENQQNILYGTFDEDSNCITIIIDDECCNQTATISNDIILDNNDNSNNSKYLNIPLENDIGSLSPTSSLSSGYESHGSPDSFTENHNIWDDDVSELFPSLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-