Basic Information

Insect: Mellicta athalia
Gene Symbol: -
Assembly: GCA_905220545.1
Location: HG992185.1:18607066-18612111[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.013 1.6 10.7 0.2 2 23 86 107 85 108 0.94

2 9 2.2 2.8e+02 3.6 0.6 2 20 330 348 329 352 0.88

3 9 0.6 74 5.4 2.6 2 21 360 380 360 382 0.94

4 9 1.6e-05 0.002 19.8 3.5 1 23 388 410 388 410 0.99

5 9 0.00027 0.033 16.0 0.8 2 23 418 440 418 440 0.91

6 9 0.00078 0.096 14.5 2.5 1 23 446 468 446 468 0.99

7 9 0.13 16 7.6 5.0 1 23 474 496 474 496 0.98

8 9 0.0027 0.33 12.8 0.8 1 23 502 525 502 525 0.97

9 9 0.79 97 5.1 6.6 1 23 534 556 534 556 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.013	1.6	10.7	0.2	2	23	86	107	85	108	0.94
2	9	2.2	2.8e+02	3.6	0.6	2	20	330	348	329	352	0.88
3	9	0.6	74	5.4	2.6	2	21	360	380	360	382	0.94
4	9	1.6e-05	0.002	19.8	3.5	1	23	388	410	388	410	0.99
5	9	0.00027	0.033	16.0	0.8	2	23	418	440	418	440	0.91
6	9	0.00078	0.096	14.5	2.5	1	23	446	468	446	468	0.99
7	9	0.13	16	7.6	5.0	1	23	474	496	474	496	0.98
8	9	0.0027	0.33	12.8	0.8	1	23	502	525	502	525	0.97
9	9	0.79	97	5.1	6.6	1	23	534	556	534	556	0.96

Sequence Information

Coding Sequence: ATGTCTTCTCAATGCTATATTATGAACTTAAACCGAATAACAGCTCAGAATGCATCGGCAAACGAGGAAGTAAAACCATCTGTATCAAAGGAAAAGGTGATGTCGTACGAGGAGAAATCTGTTGGGTCGACAGCCTTCTTTAAATGTGAGGCGTGTCCCTACATGGCTCTAGCTGAAGATGATATAAAGTTTCATTTATTCACGGCTCATCCAGACTTAGCCAAACGTAATGGGCTAGCGGACAACATCCAGATACCCTGTCCAGGTTGTACGAGTGTCTTCGACGCAGAGGAGACGCTCAGAACTCATTTACGTAATCATCACAAAATGGGTATCAAAGACGTTAAAAAGATGGTTAAGAGTCTAGTTCAAATCGCGCTTAAAAAtgcgaaattaaaaaaagaaattaacaaaaacGAAGCACCCATCCAACAACAACAAGACATTGAAGTGAAAATTCCACAAGTCATTGAAATAGTGCCTGATATAGTAAATGCTAATAATGAACAATTACCAAAAGGTGTTGCGTTTATATCCGTGGATGAACTAAATAAAATGAGTACTCCCAACTTTGAAAGAATCGACCCGAAGGAAGTGATTCAGGAAGCCAGTATCAATATAGTGTATACAAATGATGTTTCAACTCAGTATGTCAATGTTTCAAACGCTGGATCCTCAGATACAACCCGTAACTTGATTCAAATGTCCAGTGTAACACCAGACCTCATATCATCCATACAACCTAGACTGCCATCGtctatagataataatttactATCACCACAGGCAAAGAATGACACAACCTCACAACAACAGGACAACGGAATAAATTTAATGCCATACCCTCATACATTTAAAAAGAGAAAAACGTTAGAAGTAGCCCCTGAAAAAAATGGGACCCGTTGTTCAGTCTCAAACTGCCATGTACGTCTAAAAGACGCTAATAATCTCTCATATCATAGGAAATGCCATCAAAACAACCAGTTACAGTGTCCCGAGTGTTCAAAACTATTTCTAACAGTGCAGCAGCTTCATACGCATCTATGGAAAATACATACGATAGATTTGGAGCTGCCAACCTGTAATGTATGTGGCTATAAAACATACAAGAGGTATAGGCTAGTAAACATACATATGAGATGTCACAACAAATTAAAGGAATATACATgtctAATATGtacgaaaaagtttaaaaactcaAATCAGCTATCAAAACATCGTATGACCCACAAACGCGATGAAACTCGCGCTCAATGCCACATTTGTCAGCGTGAATTCTCAAATGAACGCCAACTAAGGAATCACGTAGCTGCGGTACATGAGAGATTAAAACCTTTCAAATGCTGTAATTGTGATTATACAGCAGCTAGAAAGGAGGAACTGAAATTACATTTAAGATCACATACTGGCGATAAGCCATATGCTTGCGATCAATGCAGTTACTGTACAGGGGATCACAATGCATTACGTCGCCACAAAAAGAAACATTCAAAAGAAAGTGTTTACAAATGCAAATATTGTCCATACACTGCCATACAATCAACGATGTTCGCGTCTCACATGATTTCTAAACACCCAAACGTAAAGTCAGACGACGTTCACTGTTGCCCTTATTGTCCATTTAAGTCTGTTAATAAAGACAAATATCACGTCCATTTAACTACACACCGAGATAAAGAAGGTATAAATTTGCTAATAGAAATGTCTAAGGGAGTGAAAGCAAGCAAACCAAGCTGGACTATTCCAAGCGAAAGTTCGGACAAACCCAGTGAAATACAGAATGTAGCCAATGAACAGTCAAAAGAAGCAAGCCCGAAGACCGTTAATACTATACCTATTGAAGTATACGATTGTGATAGTTTACCCGAAACTATGCCTCAAGAATATCCAAAAAATTACTGTACAAGTACATCAAATGACATtcaacaaactaattttaaCACGGAAGTTGTGACAGACCTGAGCAAAGAGGACAATAATTCAGATTGCCTTATTTCTGAAGGCTTCAACATACAAGAGAGGCACCAGTACAACACGCAACATCCTTTACAAATTTCCTATGATTCCACTCAATCAAATCTCCATTTCTTAAATTCAACTGTTTCAATCGATCAGAGTATATTACAGAGCAACAGCGTAAATTCTTTAGCGTCTAGTCATTCGCGTATAAATAATAGCATGGCAGGTAACATAATGAGTAATTTCCCAATACGACTACCTCCCGCACCAATATCGGTCCGAAATAACATAACCTTAAAACCTGTCAATAAAATTTCAGTACCTATTAATAAAATCAACGGTCCAATTATAAATCAAATGCACATACTTCCCATTCCATCGTCGAGTCACTCCCCGATAAACATATCAACTGAACTTGATGGACTGCCTCgaaaaaaacctaaaatatctgtaaaaagtaatttaatactGAAAGGGCCAGATCAAGAAAACATGTTTCATTCACAACAGAAAATGGCGTTTAAACGTCTAGAAGATAGCGAGAGATACGGTTTAGGAGgtccagtcacatttaataatttaataacaacGCAATTCATGCAACTTCAGCCGGAACCAGCGCTGAGCGAGTCTCCCAACAACATAATGACATATCCTCAAAACAACATGATGGGAGACACCGCGACCACGCCTGTCGATAATGAAATGAATGATAATCCGCAAATATTTTCTTTCCCCCAACAAATGAACGTCAATACGATGACAATGCTTCCGCCGGCGCAAAAAATACAAACGAATGATCCGAGCTACATAAAATTAGAAGCGACGATCAAACAGAACACACAATCGCCCAGTTTGGAAAGAATGTGTAACGCGAATCTTCTAAATAATCAAAGTATAAGCAGAGAATACAAAGCCTCTCCTCCCCTAGAAGATATTCACAAAAAcatgagtgaaattaaaaatgaaGTTAAATCGGACGCATTTTACAACTTAAGTCTTAACAACACAGCTACAAATCCGCCTATTATAGATCAGTATATGATAGACAATATCATTCCAGAGCAATATCCGGCTCATCTGGATCTTTCGACGGTAGTTTTGCCAGAAGTTACTGATCAGCAAAATGACGTGATAGAAATAGACGACAACTCTGACGACAACAAGCTATTGCCACGCTTTGATATGAACTTCTCCCTTGAATCTCTGTACTTAATGCATAACGATTTTCACTTTTTAGAAAATGAAGTTTCCACAAATAATATGCCCGCTGAGGTACCCGTTAATGAAATTAATAGAATGGTCTCCGAGATGCCTATCGTAAGTTCTAAAGATAATGTAGATGTTGTTTCTGTTGAAACAAACGACACGCAGAATTTTATTCAAGGGAAAAAAGACCCAATGATGAACACGTCGGTTCGACCGtcgacaaataaaataaatgtaaagaaTATTGAGTTAATGAAAAATTGA
Protein Sequence: MSSQCYIMNLNRITAQNASANEEVKPSVSKEKVMSYEEKSVGSTAFFKCEACPYMALAEDDIKFHLFTAHPDLAKRNGLADNIQIPCPGCTSVFDAEETLRTHLRNHHKMGIKDVKKMVKSLVQIALKNAKLKKEINKNEAPIQQQQDIEVKIPQVIEIVPDIVNANNEQLPKGVAFISVDELNKMSTPNFERIDPKEVIQEASINIVYTNDVSTQYVNVSNAGSSDTTRNLIQMSSVTPDLISSIQPRLPSSIDNNLLSPQAKNDTTSQQQDNGINLMPYPHTFKKRKTLEVAPEKNGTRCSVSNCHVRLKDANNLSYHRKCHQNNQLQCPECSKLFLTVQQLHTHLWKIHTIDLELPTCNVCGYKTYKRYRLVNIHMRCHNKLKEYTCLICTKKFKNSNQLSKHRMTHKRDETRAQCHICQREFSNERQLRNHVAAVHERLKPFKCCNCDYTAARKEELKLHLRSHTGDKPYACDQCSYCTGDHNALRRHKKKHSKESVYKCKYCPYTAIQSTMFASHMISKHPNVKSDDVHCCPYCPFKSVNKDKYHVHLTTHRDKEGINLLIEMSKGVKASKPSWTIPSESSDKPSEIQNVANEQSKEASPKTVNTIPIEVYDCDSLPETMPQEYPKNYCTSTSNDIQQTNFNTEVVTDLSKEDNNSDCLISEGFNIQERHQYNTQHPLQISYDSTQSNLHFLNSTVSIDQSILQSNSVNSLASSHSRINNSMAGNIMSNFPIRLPPAPISVRNNITLKPVNKISVPINKINGPIINQMHILPIPSSSHSPINISTELDGLPRKKPKISVKSNLILKGPDQENMFHSQQKMAFKRLEDSERYGLGGPVTFNNLITTQFMQLQPEPALSESPNNIMTYPQNNMMGDTATTPVDNEMNDNPQIFSFPQQMNVNTMTMLPPAQKIQTNDPSYIKLEATIKQNTQSPSLERMCNANLLNNQSISREYKASPPLEDIHKNMSEIKNEVKSDAFYNLSLNNTATNPPIIDQYMIDNIIPEQYPAHLDLSTVVLPEVTDQQNDVIEIDDNSDDNKLLPRFDMNFSLESLYLMHNDFHFLENEVSTNNMPAEVPVNEINRMVSEMPIVSSKDNVDVVSVETNDTQNFIQGKKDPMMNTSVRPSTNKINVKNIELMKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00825203;
90% Identity: iTF_00843952;
80% Identity: -