Math016251.2
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- zfy1
- Assembly
- GCA_905220545.1
- Location
- HG992185.1:18716545-18735831[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 6.8 8.4e+02 2.1 0.3 2 23 6 27 5 27 0.94 2 13 0.012 1.4 10.8 0.2 1 23 1005 1028 1005 1028 0.93 3 13 7.4e-05 0.0091 17.7 1.8 2 23 1129 1150 1128 1150 0.97 4 13 0.013 1.5 10.7 2.1 1 23 1156 1178 1156 1178 0.98 5 13 0.063 7.8 8.5 1.0 2 20 1185 1203 1184 1214 0.95 6 13 0.72 89 5.2 1.0 5 23 1228 1246 1227 1246 0.96 7 13 0.0061 0.75 11.7 0.9 3 23 1253 1274 1252 1274 0.96 8 13 0.011 1.4 10.9 0.1 2 23 1295 1315 1294 1315 0.96 9 13 0.0002 0.024 16.4 1.9 1 20 1321 1340 1321 1343 0.92 10 13 0.0088 1.1 11.2 1.4 1 23 1351 1373 1351 1373 0.98 11 13 0.0063 0.78 11.7 7.2 1 23 1379 1401 1379 1401 0.98 12 13 7.4e-06 0.00091 20.9 1.3 1 23 1407 1431 1407 1431 0.98 13 13 0.0012 0.14 14.0 5.1 1 23 1437 1459 1437 1460 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGAGAGTGCAATGTCCTGTATGTACACTGTACCTCCACAGTGGAATGACATTAGAGTCGCATTTAGATACGCATCCGAAAGACCAAGTGATAAAGGCTCTGTGTAGTTTATCAGTTAAAAACACCAGCTTCGGAAGTAGGACACCTACACCGTTGAACTCGGAGAGGTCGTATAGAAGCAGGTCACGGACACCCGCCACTGATGACAGTGGACGGTGGAATAATTCTCATCGCAATAGTGATAATGAAAGATACTGGAGAAGAACTCCGAGTAGAACAAAGTCAACTCCGCATTCAATATCAAGAAATGCAACACCGGATTTGAGAATTGgaaatataaattttgatagTCATAACTCCAGCAATGCTTCAAGCCACCAAAGCCCGTGCTCTGATGCATATACAGTTAAATCAGATAAGACACATCAAACTTTTACATCCAATTGTCAGTCTATCGAGTCAGCTTCAGATTTTGAACAACAATATCCGTATTATTCTGATCAGCAAGAAGATACAGAAATTAAGTTTTCTCGAAGTTCAGAATATACTACACAGTTAGATAATGCAAATAATGTTTTCGCATACAATATTCCTGTTGTAGGAACTGGTGTCAAGCTGCCAACTACGATGATGCCAACAGTGCCTAGAAGAGGGAATGAGTTTGTTAAGATCGTACCTAAGCAGGGTAACCTTCTCGTTAAGACTAATATGGCTGGTATGCAATACATGCCACCAGGAGTGAAACCGATGCATGTGATGATGCCAACCACGGCACCGTTTGTTCAGAAAAATCTACAAAACAATATGATTATGACTGGAAACGTACCTACCAGTCAATTATTGGACCCAAAGTTAATAGCGCCACCATTAAACAATCAGTTTAATCAAATAAACCCAGGAGCTTTTACACCAGGGACAACGGTAGTTACCCAAAATTCACAAATAATTTACAGAGAGATGGTTCATAATATAGATGGTAAACCATTTATTTCAAGTATGCCTGCGGTACTTGGTGGACCTGAAAATGTCACAAATGTCGCCCAGAGTAGTTCGATGTACCAAAATGTTATGGTAGTTGATCAGTTTGGTAATACTTCCTGTATGTATACAACACCACAGCATCTAGTATCTAAACCCTGTGCACCTGCATTTAATGAAAGTGGATCTTTCATTCAAAATCTGCCAGAGAAAACTGTGCCCAATGTGGTCAGTGATGGTAATAAAACACTAATCATTGAAGTGAGTCCAATGTTATCAACAGAAAATGTAAATGGTACTGAAACAAGTCAAAATACATTGCAGCAACAAAGAGAAAATCCTGTTAATAAAAAATTGGAGCAGGAAAAGACAGAACCTAAAATTGAATCCCCGGGGCCTAGTAAGGGTTTGAAAATCCTTAGCAATATTAAGGTAGAGGTTCCCGTACAGCATCACAAAAATATGCTTAATACTGTAATGGATTTGACTGGATCAGCTGACTCTGATTATCCCGAACGCTCTGTCACTCCAGAGAAAATATTACCAGATATAGACGATAACAATCACAGTTTATCTGATGATTGTACTCAACCTTCTAAAACGAGCAGTGATAGCTTAGCTTCCAGCTCATTCTCCGTGTTAAAAAATACAAGTAATGCTCAACAAAGAGAAATGTCTTCGAAATCTACAATTGTAGAAAATAAACTTGATGCAGAATTTTCAGACAGTTGTCCGGTACCTGATCTTATTTGTAATGAAAAGCCATCAATATCACCATGTAGCGAGTTATCCGAACAAGACAATTCTAGTGATCGGCTTATTATCTCATCTCCGAGACCAGAAAGTAGCCAGTCTTATCACAGTccgataaataatattaatattgaaaaaataccGTCAAAACCAACGCGACATAATCCTCTacgactaaataatatttttgtaaagaaaCACAAAAAGGTTTTGCAAATAAAGAACTCGAAAGCATTTTCACAGTTTACTACTAAATTAACTGAACAAGAACCTCGGGCGTCCTCTTCTTCAAGTAAAACTTTGGAAGAAATTGCAATTAATAAAACACCAGGAGTTATTGAGAAGTGCGACGCGAATGGTGAATTGCAAACGGTATCAATagaaaaaattgaacataataACGAGGATGAAAATGAATTTGACGCCAACACCGAGGTTCAGTCAATGGACATAGAGCCGGTCACACCGTCTAACGTTAACCATCCCTCTGAGTACAGCAGTACTGTGGATATGGTCCAAGTAAAGGAAGAAATAAATTCTAGCAATGAATTTAGCAATGGAACAGACAGGTCTACGGATATCGCACCAATGGAGACgcttaggccgataaacgttgTCAATTATGGAAACATGGCGGGAGAATTCGACGACGATTCAAATCACAGAGAACTGCTGGACTTAGAAGCTGCTTCGAAAAATAAACAATTCGTGTCCATGATGAACGAGAACTATTTCGGTGATAACATATACGCGGACTACTTCACCCCGGATCGTGTTGAAGCGTTAGAAGCGGAGAAAGTGTCGCACTATGCTAAAGAAAATGGAAAAGATGGAATGTACATTTGGGGTGAATCATCGCAGAAGGAAAGTGAATTTGTATTACCGAATTTCATTCACGAAAGTTACAAAATAGCTGAGAGTACCGGAATGGAATACTCCGACATGGGCACGGGGGCGGAGCATATGGACGGTGATGTAGACAGGTGCGAACGCGATAGTAAAGCTGATGTGTTGAGTGAGAGTAGGAGTGAAGGCGAGCCGGCCCTGAACATCTGCACGGACGAAAGAATGCCGCCTCGTGGGGAACTCAGCGGTCAGGAGAGCAACGGAGACATGGAATCACCTTGGACTGGGATGTATTCAGGAATACCACCAGCAGAGCCTTATGATTTGATGGCGCGAGAGAGCTGGGTGTCGGATGGGTCTGACGTAGACGCCAACGAGAAAACAGAAAACGTTATCGAAGAAGAGATCCACTTTCCAAAAAGCCGGACGTACACTTGCGCGCAGTGTGGCGTGAAGTTCCCATCGTTGAAAGAACTTCGAGGGCACAAGTCCCTGGTTCACGCAGCGACCACCTCCAGCTCCAAGACTTCATACAGCCGCCTCATGACAGCTCGAACTATCAAGAAGGAGGAGAAGCAGGATGACCTGTTACCAGGTAGTTTACTTTCACTGGATACGAAAGAGGGTATGGCGTCGACTATGTTGCAAGTATACAACGCCATGAGTGAGACGAAACCCCATATCGAAGGTCTCATAAAGCAGGAGACCAAGAAGAGAAGAAAGGACTTCGTGTGTCCTACGTGTAAAGTAGACCAGTTGAACGATGCCGCCTTCCACGCTCATCTGAAAGAACACCCACTGGAGTGCCTCACATGCGGAAAGTGTTTCTTCAAGCGTGCCAACCTAGCGCTCCATATCAAGACACATCTCGGGATAAGGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCCTCACGCGCCAGAAGCTGGCGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACGCTCTGCGACGACACCTTCCGCAGATACTCCAACATGGTGCAGCACAGATACTCCAACATGGTGCAGCACAGAGACCGTCACCACTTCAAGAAGAAGACGAAGGTTCGCGACTTCGTGTGCCAGTGCGGCGCCGTGTTCCACTCGAGGGCGAAGCTCCTCTGGCACAAGGAGACCCACGACGACAAGCCCAAGGCCTGCGTGTACTGCAGCGACAAGTTCGTACACGCGGCCTCGCTCACGAGACACATACGGAGGACTCATAACGAGTTGTTCCTGGCCGATAGAACCGACCGTACGGATAGAGGCAGAGCTGAGAATGTGCCCTGCCCTGTTTGCAAACAGATATACCTCAGATCCAACCTGCGTGCCCACCTGTTGACACACAGCGGCAAACGTCCGTACCACTGTGTTATATGCAACAAAGCGTTTACGACAAAGTGGAACCTTAAACTCCATCGCTGGACGCACCTGAGCCGGTCAGCGAAACCCTTCAAGTGCAACCTCTGTAAGGGCGCCTTCATACGACACACTGATTACGTATCACATATGAACGCTCACAAGTCAGTTCGTCCCTACACTTGTAATTACTGCGGATGTCAGTTCATTAGAAAGTACAATTGCCAACGTCACGTACGAGAACATGAAATGGCGAAGAAGTATGTGTGTAAAGTGCCCGAGTGCGGTAAATCCTTCCACAGGAGTTATTATCTGTCCGAACATATGAAAGTGCATAGTGGTGCGAGGCCTTTCTCTTGTAATATCTGCGGGAAGACTTCGAGTAACAAGTCAAATCATAATAAGCATGTGAAGATACACCATGCACGGGAGCCCATAGCGACTGAGGCGTAA
- Protein Sequence
- MDQRVQCPVCTLYLHSGMTLESHLDTHPKDQVIKALCSLSVKNTSFGSRTPTPLNSERSYRSRSRTPATDDSGRWNNSHRNSDNERYWRRTPSRTKSTPHSISRNATPDLRIGNINFDSHNSSNASSHQSPCSDAYTVKSDKTHQTFTSNCQSIESASDFEQQYPYYSDQQEDTEIKFSRSSEYTTQLDNANNVFAYNIPVVGTGVKLPTTMMPTVPRRGNEFVKIVPKQGNLLVKTNMAGMQYMPPGVKPMHVMMPTTAPFVQKNLQNNMIMTGNVPTSQLLDPKLIAPPLNNQFNQINPGAFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPAVLGGPENVTNVAQSSSMYQNVMVVDQFGNTSCMYTTPQHLVSKPCAPAFNESGSFIQNLPEKTVPNVVSDGNKTLIIEVSPMLSTENVNGTETSQNTLQQQRENPVNKKLEQEKTEPKIESPGPSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSADSDYPERSVTPEKILPDIDDNNHSLSDDCTQPSKTSSDSLASSSFSVLKNTSNAQQREMSSKSTIVENKLDAEFSDSCPVPDLICNEKPSISPCSELSEQDNSSDRLIISSPRPESSQSYHSPINNINIEKIPSKPTRHNPLRLNNIFVKKHKKVLQIKNSKAFSQFTTKLTEQEPRASSSSSKTLEEIAINKTPGVIEKCDANGELQTVSIEKIEHNNEDENEFDANTEVQSMDIEPVTPSNVNHPSEYSSTVDMVQVKEEINSSNEFSNGTDRSTDIAPMETLRPINVVNYGNMAGEFDDDSNHRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEALEAEKVSHYAKENGKDGMYIWGESSQKESEFVLPNFIHESYKIAESTGMEYSDMGTGAEHMDGDVDRCERDSKADVLSESRSEGEPALNICTDERMPPRGELSGQESNGDMESPWTGMYSGIPPAEPYDLMARESWVSDGSDVDANEKTENVIEEEIHFPKSRTYTCAQCGVKFPSLKELRGHKSLVHAATTSSSKTSYSRLMTARTIKKEEKQDDLLPGSLLSLDTKEGMASTMLQVYNAMSETKPHIEGLIKQETKKRRKDFVCPTCKVDQLNDAAFHAHLKEHPLECLTCGKCFFKRANLALHIKTHLGIRNYKCEVCEKRFLTRQKLAEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRYSNMVQHRDRHHFKKKTKVRDFVCQCGAVFHSRAKLLWHKETHDDKPKACVYCSDKFVHAASLTRHIRRTHNELFLADRTDRTDRGRAENVPCPVCKQIYLRSNLRAHLLTHSGKRPYHCVICNKAFTTKWNLKLHRWTHLSRSAKPFKCNLCKGAFIRHTDYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPIATEA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01506613;
- 90% Identity
- iTF_00985456;
- 80% Identity
- -