Math024677.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992191.1:19560375-19574364[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 2.8e-05 0.0034 19.1 0.0 3 23 19 41 18 41 0.95 2 23 5.9e-06 0.00072 21.2 1.4 3 23 49 69 47 69 0.97 3 23 0.015 1.9 10.4 1.7 3 23 170 191 169 191 0.95 4 23 0.015 1.9 10.4 1.7 3 23 254 275 253 275 0.95 5 23 0.015 1.9 10.4 1.7 3 23 338 359 337 359 0.95 6 23 0.015 1.9 10.4 1.7 3 23 422 443 421 443 0.95 7 23 0.015 1.9 10.4 1.7 3 23 506 527 505 527 0.95 8 23 0.015 1.9 10.4 1.7 3 23 590 611 589 611 0.95 9 23 0.015 1.9 10.4 1.7 3 23 674 695 673 695 0.95 10 23 0.015 1.9 10.4 1.7 3 23 758 779 757 779 0.95 11 23 0.015 1.9 10.4 1.7 3 23 842 863 841 863 0.95 12 23 0.015 1.9 10.4 1.7 3 23 926 947 925 947 0.95 13 23 0.015 1.9 10.4 1.7 3 23 1010 1031 1009 1031 0.95 14 23 0.015 1.9 10.4 1.7 3 23 1094 1115 1093 1115 0.95 15 23 0.015 1.9 10.4 1.7 3 23 1178 1199 1177 1199 0.95 16 23 0.015 1.9 10.4 1.7 3 23 1262 1283 1261 1283 0.95 17 23 0.015 1.9 10.4 1.7 3 23 1346 1367 1345 1367 0.95 18 23 0.015 1.9 10.4 1.7 3 23 1430 1451 1429 1451 0.95 19 23 0.015 1.9 10.4 1.7 3 23 1514 1535 1513 1535 0.95 20 23 0.015 1.9 10.4 1.7 3 23 1598 1619 1597 1619 0.95 21 23 0.015 1.9 10.4 1.7 3 23 1682 1703 1681 1703 0.95 22 23 0.015 1.9 10.4 1.7 3 23 1766 1787 1765 1787 0.95 23 23 0.015 1.9 10.4 1.7 3 23 1850 1871 1849 1871 0.95
Sequence Information
- Coding Sequence
- ATGAAACACCGAGGCCAGGTCACACAAACTCGCAGGAAGATCACACGTCGGCCGTGCCCGGCTCCGGGATGTAATAAGAGCTTCACATCCATAACTAACCTCAACATTCATATAAGGATTCACAATGGTGAGAGACCGTACGGGTGTACGGAGTGTGGAAAGACGTTTAGAAGTTCGACAACACTCAACAATCACAAGAGGATTCATACggTGTTCCGTGTGTACAGGAGTGAAGCCGTACATGTGCCCCACGTGCGGCAAGCGCTTCACGACCAACAAGCTGTCGGCGCACATGCGCACGCACGCGCCGAGACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGAGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGAGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGAGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGAGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGGTGAGTGTATAGCTGTGTATATGGAACCGAGAGCGAGCAGCCCGCGCACACGTCCGGCCgccgcggcgcgcgcctgccgACTGTGCCCCGCGCGCTACACGCACACGCAGTCGCTCAACAAGCACATGCGCGCGAGGCACGGCCTGAAGACTTCGTCAACAAATGCGGACCAGCAGGTGGGATTGACGTAG
- Protein Sequence
- MKHRGQVTQTRRKITRRPCPAPGCNKSFTSITNLNIHIRIHNGERPYGCTECGKTFRSSTTLNNHKRIHTVFRVYRSEAVHVPHVRQALHDQQAVGAHAHARAETESEQPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAEYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAEYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAEYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAEYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLPAHTSGRRGARLPTVPRALHAHAVAQQAHAREARPGECIAVYMEPRASSPRTRPAAAARACRLCPARYTHTQSLNKHMRARHGLKTSSTNADQQVGLT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -