Math035876.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- ZBTB47
- Assembly
- GCA_905220545.1
- Location
- HG992200.1:10691983-10711743[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0026 0.32 12.9 2.2 1 23 240 263 240 263 0.95 2 25 0.13 16 7.5 0.0 3 23 290 311 288 311 0.93 3 25 0.0097 1.2 11.1 1.1 1 23 333 355 333 355 0.98 4 25 0.17 21 7.2 1.8 1 23 359 381 359 381 0.81 5 25 0.061 7.5 8.6 0.2 1 23 385 408 385 408 0.95 6 25 1.2 1.5e+02 4.5 3.3 2 23 415 437 414 437 0.95 7 25 0.06 7.4 8.6 1.4 3 23 446 467 445 467 0.94 8 25 0.0015 0.18 13.7 4.6 1 23 473 495 473 495 0.98 9 25 1.2e-05 0.0015 20.2 1.0 1 22 501 522 501 522 0.96 10 25 0.0071 0.88 11.5 1.5 1 23 558 580 558 580 0.96 11 25 0.097 12 7.9 0.0 3 23 610 631 608 631 0.93 12 25 0.068 8.4 8.4 0.6 2 23 652 674 651 674 0.96 13 25 0.00023 0.029 16.2 1.2 2 23 680 702 679 702 0.95 14 25 0.0061 0.75 11.7 1.1 1 23 707 730 707 730 0.95 15 25 1.7 2.1e+02 4.0 0.6 2 23 733 755 733 755 0.93 16 25 0.015 1.9 10.4 2.7 2 22 762 782 761 782 0.95 17 25 0.07 8.6 8.4 1.1 1 23 832 855 832 855 0.90 18 25 6.3 7.8e+02 2.2 0.1 3 23 884 905 882 905 0.91 19 25 1.1 1.4e+02 4.6 0.3 3 23 929 951 927 951 0.92 20 25 0.072 8.9 8.3 4.9 2 20 957 975 956 979 0.89 21 25 0.0054 0.66 11.9 0.6 1 23 984 1007 984 1007 0.97 22 25 0.0015 0.18 13.6 0.4 2 23 1013 1035 1013 1035 0.94 23 25 0.00011 0.014 17.1 4.6 1 23 1039 1062 1039 1062 0.97 24 25 0.00023 0.028 16.2 0.8 2 23 1069 1090 1068 1090 0.96 25 25 0.0022 0.27 13.1 1.7 1 23 1096 1118 1096 1118 0.98
Sequence Information
- Coding Sequence
- ATGGATTTCGACGGAATTGTGGTGAAAGAGAGCCCGGGTCTCTGCCGGTGCTGTCTTTCTGAAGGCTGCTATAAGGACTTAGGCTCAGAGTATACATGGATGGATGATACCGAAGTATACGCCGATATGCTGTTAGAATGCTTTGATATTAgcATATCACAGCACGTTGAGGGTCCGAATGGTCCGAACCGCCTCATCTGCGAGGTCTGCATCACTCGTCTCCGAGATGCTTGCAACTTCAAGAAGCAGGTACTCGATACTGAGAAAAAGTTTGTGGATATGGTCGGCAGAGGCGAGTTCAAGTCTAATAAAGTAATCGTCTACCAGAATGAGATGAAGGCGGAGATGGTACTGGAGCCGGAGCCGGTCGAGGAGACCGAAATTGAATACTTGGATGAGGATTTGGATTAtgatgATGGCAACAAAGATGACACAAACGAACCGTCCGTCTCAGAGGACATAACGGTGGACACATTACCGATGAAAGGCAAACGTGGTCGAGCAAAAAAGGCAGCGGATAAACCGGAGAAGAAAAAGAAATTAGAGGAGAAGGCTAAACCGAAAATTGTTAAAGgTGAGAAACGCCCTGAGAAGGCGACAGAGGCGCAGAGTAAGTCCTCAATGACAGCCACAAAGAGAAATCGCCTTATAAAAAGGAAtgccataattatattagaaaCGTCGACCGTTATACCTTTTAAATGGCATCGCCACAACTACCTCTGTTTTTACTGCCACCGCCCTTTCAAAAGCTTAGACCCTTTGAAAGAACATACCAGAAACGATCACGAGAAGTCCAGTGTAAAATCTGCCGTCTCGTACCTTAAAAGAGACGAAAAGGTTAAAATTGACGTTTCTGTgattaattgtaaaatatgcGATGAAAAACTCGACAGTGTCGATTCCCTAATAGACCATGTAAAAGCGAATCATGATAGGATTTTCGTTGACAATTGTGGCTATGGCATTATACCATATAAGTTGAATAATGATAAATACGAATGCGCGCTATGTAAAAAggattttcaatattttatcaaactgAATCAGCACATGAACGAACATTTCGGTAATTACGTGTGTGAATTGTGTGGCAAGTCGTTTCTGAGTCAAGATCGTTTGCGTTGTCATTCTCTAAGTCACGGTTCCAACTTCCGTTGCGGAACTTGTCCGGAAGTCTTTGAGTCGTTAACTCTGAAGAACAATCACGAGCAATCAGttcataataaaaagaaaactattAAATGCTTTTTCTGTTCGGAAACCTTCCAAAACTACGTTTTAAGAAAGCGCCATCACAACTCTGCtcataatgtcgaaatatctgTAGCCAATTGTCCGGTTTGTCACAAATCTTTCCACATCGTGAGCAAAATGTGGGCGCATTTAAAGGAAGTGCACATCAGGGAGAAAAAGTTTTCCTGCTCACTTTGCGATCAGAAGTTCTTCTCAAGGACTCATGTTCAGAAGCATATGATAAAGCATTTGGGGGAGAAGATTCACCAGTGCGAGATATGCAAGAAGTCATATGccaggaaacaaactttaagaGATCATATGCGTGTAAAACCACGCAAAATCAACGCCGAACCAACATCGATGCGTAGacggaaaaatttaaaattgctaTTCAACAATACCACCATTATACCTTTTAAGTGGAGGGGAAAGTACTTGTGCTTTTACTGCAGTAAAGATATTGCGCAGTATTCCGATTTACGTAAACATACAAAGTCACACGGAGATTGCTCTACAGAGGATCGTTCGTTAAAAATCCTTAAAGGCGGACAGAgtatggaaataaaaattgatatatCTGAAATAGCTTGTGAGATCTGTTACGAAGAATTTCCTGTTCTTGACGATTTGCTTAATCATCTTTTCGTTAAACACGAATTAGAATACGATAAGGATGTCGATATGGCTATAGAGGAGTACAGACTAGTTGATTTAAGTTGCACACAATGTGAAGACAAGTTTACGTACTTCGGCTATCTCGTTTCCCACATAAATACTAATCACCCAAAGAACTGCTTGATATGCGACAAATGTAACCAGAAATTTAATAAGAAAAGAGACCTGGCCTGGCATATGAAGAATTATCACAGGGAAGGTGGTTACGCGTGTGATATTTGTGCGCAAAGTTACAAATCACTAAATACATTAAGAAATCACAAAAAGAATCGACATTGGGCaaaatgtaatatatgtaatttgagGCTACCGTCAATCGTCTTGAAAAAGAAACATATGGAATTAAAACACCCGGATAGAAAATCGTTACAATGCGATATATGTAACAAAGACTGCCATACGCAACAAGGTCTAAAATCGCACTTACGTAAATGTAAAGGCGATACCTTAGAGATCAAGAAAGAAGGTGATAATAGGGACCAAACTACAGTAAAACCGAGCGTCAAAAGGGTTAGAGAAAATATTGTAACAGTAATCAATATGTCTACAGCGATACcatttaatttctttaaaaataaattcaattgtTTCTATTGTTCCAAAGACTTCCACGATTCCGATTTGATGAGAGAACACGCAGTTGTAGAGCATCCAGTGTGCGATATTAAAGACAAGTGTATTATGAGATGTAAAGAGACGGTTACTTGCGTTAAAATAGACATTTCTTCTCTCGCCTGTAAGGTTTGTTTCGAATCTATGCCAGATTTAAATACTCTAATAGACCATCTTATACTAAAACATGAGGCCAATTACGATAAATCTATAACCTCATGTTTTCAACCTTACAAGTTGATAAAAGATCATATGGCCTGTCCTAATTGTTCAAGCGAAGTGTTTAGATTTTTCGGCACGTTGTTACAACATATGAACGACAAACATACGAATAATAAGATAAAATGCGAGCACTGTGGTAAGACTTTCCGATGTGACCAGAATTTAAGAGTTCATATATGGAGACACCATAGAGATGGTAGTTTCAAGTGTAACATATGTGGAGCGGATTGTAACATACCTTCGAGATTGTACAAGCACATGGCGAAAGCTCATGGCGTCAAAGCGGCAAAATGTCCAAAGTGTTCAGAAACTTTTGCCACGCAGTATCTGAGACAGAAACATCTGATTGAAGCTCACGATTCGGGTCACAAGTGTTCCTATTGCGGGAGACTGTTTACCAGAAATTCTTTCCTGTTTGATCATATCAAGCGAACGCATTTGAAGGAGAAAAACGTTGAGTGTTCGGTATGCAATATGAAGTTCTTCAATAATATACAATTACGTCGTCACATGGTCAAACACAGCGGTGAGAAGAACTTTAGCTGTGATATGTGCGGGGAAAGGTTTTATTGGAAGAATACATTACGTACACACATGACCAAGCATAATAAATAA
- Protein Sequence
- MDFDGIVVKESPGLCRCCLSEGCYKDLGSEYTWMDDTEVYADMLLECFDISISQHVEGPNGPNRLICEVCITRLRDACNFKKQVLDTEKKFVDMVGRGEFKSNKVIVYQNEMKAEMVLEPEPVEETEIEYLDEDLDYDDGNKDDTNEPSVSEDITVDTLPMKGKRGRAKKAADKPEKKKKLEEKAKPKIVKGEKRPEKATEAQSKSSMTATKRNRLIKRNAIIILETSTVIPFKWHRHNYLCFYCHRPFKSLDPLKEHTRNDHEKSSVKSAVSYLKRDEKVKIDVSVINCKICDEKLDSVDSLIDHVKANHDRIFVDNCGYGIIPYKLNNDKYECALCKKDFQYFIKLNQHMNEHFGNYVCELCGKSFLSQDRLRCHSLSHGSNFRCGTCPEVFESLTLKNNHEQSVHNKKKTIKCFFCSETFQNYVLRKRHHNSAHNVEISVANCPVCHKSFHIVSKMWAHLKEVHIREKKFSCSLCDQKFFSRTHVQKHMIKHLGEKIHQCEICKKSYARKQTLRDHMRVKPRKINAEPTSMRRRKNLKLLFNNTTIIPFKWRGKYLCFYCSKDIAQYSDLRKHTKSHGDCSTEDRSLKILKGGQSMEIKIDISEIACEICYEEFPVLDDLLNHLFVKHELEYDKDVDMAIEEYRLVDLSCTQCEDKFTYFGYLVSHINTNHPKNCLICDKCNQKFNKKRDLAWHMKNYHREGGYACDICAQSYKSLNTLRNHKKNRHWAKCNICNLRLPSIVLKKKHMELKHPDRKSLQCDICNKDCHTQQGLKSHLRKCKGDTLEIKKEGDNRDQTTVKPSVKRVRENIVTVINMSTAIPFNFFKNKFNCFYCSKDFHDSDLMREHAVVEHPVCDIKDKCIMRCKETVTCVKIDISSLACKVCFESMPDLNTLIDHLILKHEANYDKSITSCFQPYKLIKDHMACPNCSSEVFRFFGTLLQHMNDKHTNNKIKCEHCGKTFRCDQNLRVHIWRHHRDGSFKCNICGADCNIPSRLYKHMAKAHGVKAAKCPKCSETFATQYLRQKHLIEAHDSGHKCSYCGRLFTRNSFLFDHIKRTHLKEKNVECSVCNMKFFNNIQLRRHMVKHSGEKNFSCDMCGERFYWKNTLRTHMTKHNK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985367;
- 90% Identity
- iTF_00985367;
- 80% Identity
- -