Basic Information

Insect: Mellicta athalia
Gene Symbol: pol
Assembly: GCA_905220545.1
Location: HG992200.1:9684934-9697521[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 6.9 8.5e+02 2.1 0.3 1 23 626 651 626 651 0.90

2 30 0.38 46 6.1 5.4 1 22 660 681 660 683 0.88

3 30 0.21 26 6.9 0.7 1 21 764 784 764 785 0.96

4 30 0.42 52 5.9 0.2 2 23 857 878 856 878 0.93

5 30 0.038 4.7 9.2 0.1 1 23 882 904 882 904 0.95

6 30 1.1 1.3e+02 4.7 0.8 1 15 909 923 909 932 0.78

7 30 0.11 13 7.8 0.2 1 23 938 961 938 961 0.94

8 30 0.0044 0.54 12.2 1.2 1 23 968 991 968 991 0.98

9 30 0.00052 0.064 15.1 0.4 1 23 998 1020 998 1020 0.97

10 30 0.015 1.8 10.5 0.2 1 23 1094 1117 1094 1117 0.96

11 30 0.16 20 7.2 4.7 1 23 1188 1210 1188 1210 0.98

12 30 0.00015 0.018 16.8 0.8 1 23 1214 1236 1214 1236 0.98

13 30 0.0019 0.24 13.3 0.1 1 21 1270 1290 1270 1293 0.90

14 30 0.031 3.8 9.5 1.7 1 21 1300 1320 1300 1321 0.93

15 30 0.1 13 7.8 0.8 1 23 1365 1387 1365 1387 0.97

16 30 0.0099 1.2 11.0 0.3 2 23 1412 1434 1411 1434 0.96

17 30 0.015 1.9 10.5 1.7 1 23 1455 1477 1455 1477 0.98

18 30 0.055 6.8 8.7 4.6 1 21 1481 1501 1481 1503 0.95

19 30 1 1.3e+02 4.7 0.1 3 23 1510 1531 1508 1531 0.83

20 30 0.0069 0.85 11.5 4.4 1 23 1537 1560 1537 1560 0.96

21 30 0.045 5.6 9.0 1.5 1 23 1601 1623 1601 1623 0.95

22 30 5.3 6.6e+02 2.5 0.1 2 23 1647 1669 1646 1669 0.93

23 30 0.0012 0.15 13.9 3.7 3 23 1693 1713 1692 1713 0.98

24 30 0.00068 0.084 14.7 3.2 3 23 1719 1739 1718 1739 0.97

25 30 0.0019 0.23 13.3 2.8 1 23 1746 1769 1746 1769 0.98

26 30 0.00056 0.069 15.0 2.1 1 23 1775 1798 1775 1798 0.96

27 30 0.032 4 9.4 0.6 1 23 1804 1827 1804 1827 0.97

28 30 0.00026 0.032 16.0 0.4 1 23 1833 1855 1833 1855 0.97

29 30 9e-06 0.0011 20.6 1.2 1 23 1861 1883 1861 1883 0.99

30 30 9.5e-05 0.012 17.4 5.3 1 23 1889 1911 1889 1912 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	6.9	8.5e+02	2.1	0.3	1	23	626	651	626	651	0.90
2	30	0.38	46	6.1	5.4	1	22	660	681	660	683	0.88
3	30	0.21	26	6.9	0.7	1	21	764	784	764	785	0.96
4	30	0.42	52	5.9	0.2	2	23	857	878	856	878	0.93
5	30	0.038	4.7	9.2	0.1	1	23	882	904	882	904	0.95
6	30	1.1	1.3e+02	4.7	0.8	1	15	909	923	909	932	0.78
7	30	0.11	13	7.8	0.2	1	23	938	961	938	961	0.94
8	30	0.0044	0.54	12.2	1.2	1	23	968	991	968	991	0.98
9	30	0.00052	0.064	15.1	0.4	1	23	998	1020	998	1020	0.97
10	30	0.015	1.8	10.5	0.2	1	23	1094	1117	1094	1117	0.96
11	30	0.16	20	7.2	4.7	1	23	1188	1210	1188	1210	0.98
12	30	0.00015	0.018	16.8	0.8	1	23	1214	1236	1214	1236	0.98
13	30	0.0019	0.24	13.3	0.1	1	21	1270	1290	1270	1293	0.90
14	30	0.031	3.8	9.5	1.7	1	21	1300	1320	1300	1321	0.93
15	30	0.1	13	7.8	0.8	1	23	1365	1387	1365	1387	0.97
16	30	0.0099	1.2	11.0	0.3	2	23	1412	1434	1411	1434	0.96
17	30	0.015	1.9	10.5	1.7	1	23	1455	1477	1455	1477	0.98
18	30	0.055	6.8	8.7	4.6	1	21	1481	1501	1481	1503	0.95
19	30	1	1.3e+02	4.7	0.1	3	23	1510	1531	1508	1531	0.83
20	30	0.0069	0.85	11.5	4.4	1	23	1537	1560	1537	1560	0.96
21	30	0.045	5.6	9.0	1.5	1	23	1601	1623	1601	1623	0.95
22	30	5.3	6.6e+02	2.5	0.1	2	23	1647	1669	1646	1669	0.93
23	30	0.0012	0.15	13.9	3.7	3	23	1693	1713	1692	1713	0.98
24	30	0.00068	0.084	14.7	3.2	3	23	1719	1739	1718	1739	0.97
25	30	0.0019	0.23	13.3	2.8	1	23	1746	1769	1746	1769	0.98
26	30	0.00056	0.069	15.0	2.1	1	23	1775	1798	1775	1798	0.96
27	30	0.032	4	9.4	0.6	1	23	1804	1827	1804	1827	0.97
28	30	0.00026	0.032	16.0	0.4	1	23	1833	1855	1833	1855	0.97
29	30	9e-06	0.0011	20.6	1.2	1	23	1861	1883	1861	1883	0.99
30	30	9.5e-05	0.012	17.4	5.3	1	23	1889	1911	1889	1912	0.96

Sequence Information

Coding Sequence: atggcTTACAATCATAACATTTCTATTTATTACCAGAACTGCCGCGGTCTTAGAACCAAACTACACACACTGTTCATGAACATACTAGCATATTCGTATGATATCATAATACTAACCGAAACTTGGTTGCATACAGACATTTCGGATAGCGAGTATATTGACAATAGATATCTGACATTTCGAGCGGACCGTGATCGAGAGGCGAGCGGTCGGCTTGATGGCGGTGGCGTACTGATCGCGGTGCGGCGGGCACTCTGCGCGGGCTGCGCACTCGCACCGATCGCTCCCATCCCTTCCATCATAGATCAGGTTTTTATTGAACTACAACTAgctaacaaatattattatataggaGCTGTTTACATTCCGCCGAAGCAAAACCAGCAGGTTTATTACGACTATTTTAATGCtttgcaaaataaaatattggatGAAGAAATTCGTAGGGCATTAGAATCTCTTGATGTCTCTAAGGGTGCTGGAGTTGACAATATACCCTCTATTTTCTTTAGGGAAACTGCAACAGTGATTGACCAGCCTCTTCActatctttataataaatgtatatctGACGGTATTTTTCCAAACATATGGAAGAGCGCTAGAATTGTCCCTGTACATAAGGGGGGAACAAAGAGTGATATAGAGAACTATAGGCCTATATCTATTTTACCGGTTCTCTCAAAGGTCTTTGAGAGACTAGTCCACAATGCTATATATCCGTTCTTGCACAATAATATCCTACAGCAGCAGCACGGTTTCGTAAAAAGACGTTCGACTATAACAAATCTGTTAACCTATACAACGGATTTATTTGATGGACTTGATGCAAACACCCAAATCGATAGTGTCTACACAGATTTCCGCAAGGCGTTTGATCGAGTAGACCATCGTATATTGCTGGAAAAAATTGCATACAATGGTATAAGAGGAAACCTCTGGAGGTGGCTTAAATCTTACATCTCTAATAGAACACAGAGGGTGGTGGTTGGTGGTTGTGAATCATCTACATCAAGTGTAAGCTCCGGTGTCCCACAGGGATCTATCTTGGGGCCGTTACTGTTTGTCATCTTCATAAACGATATTAACAAATGCTTCCTTAATAGTAAATTTCTTCTCTACGctgatgatttaaaaatataccgaaaaataaatatctaccaaGACCACGTTTTGCTTCAGGAAGATTTGGATAGATTCACAACCTACtgctatgaaaataaattgGAGCTTAGCCTCAACAAATGTAAAAGCATAAGCTTCACTAAAAGAAAAACGGTAAGCAGTTTCACGTATTCCCTTTGTGACACAGATATTGATAAAGTACAAAATATAAGAGACCTGGGCGTAACAATAGACAATAAGCTACACTTTGACACtcatatatataacattatTAGTAAAGCCTTTCAAATGTACAACTTTGTCATGCGGTCCTCTACTGAATTTAGACATCCATCCACACTCGTGTATCTTTTTAAGTCCTTAATAAGGCCACAACTTGAATACGCCGTTGCTATCTGGAATCCGTTCTATATTAAATATGAGAGGAGCTTAGAAAGGGTGCAGAAAAAGTTCTTACGTCACATGAATTACAAATGTTATCGTAAGCGTATGCCTTACGAGTCGCTTTTAAGGAAATACAAACTGCTTGACTTGAAATCTAGACGACTGCAACTAGAAGCTATGTTGCTTTACGATCTTTGTAATAATAAGTATGATTGCATGAACATTGTAAACAAAATCAGATATTCTGTGCCTTCGCGCGCTCATTTGCGACCATCCCGCCATTATCAATTTTTTGCAGTAACACGATCTCGTACGAATGCAGAGGAAAGGAACGTCCACATTAAAACACAGCACACAACGCTGCCATATATGTGCGTGTACTGCAAGGATAAACCAAGATTTGCGACTTGGGAGTTGAGGAAACGGCATCTAATGGAGATACATAACTACAAGCCAGGGGCGGAAATGTACGAATGTACGACTTGTCACATGATGTTCAAGACTCGATCGCAAAAGTATCACCACAATGTAAAAGTTCATCGGACGAAAAAGGAAATTGACTTTGGGTTCTCATGTGGAGAACGCGGAAAAACCGAAAATAAGATCGCAATAAAACTAGAGACGTCAGAGAGTTACGTCGAAAAAGATTCGTCCAAAGTGACGGAAAAGAAACGTTATCAAAGAAGTGCCAGAGCCGAAGCGCGGTTCGTCACAAAGAAGAATGCGAGCTCGATTCTAGAATGTTGGACGCTCTGTCCATTTAGATGGAAAAGAAATCGATTTAAATGCGCCTATTGTGAGGATAACTTCACTGAATGTGCAGAATTGAGAAATCACGTCAGACTTTGTTCGACTCAGCATAGCGTTAAGGATATATACAGCAAATTCAAGGAAATGTCTCTAATAAATATAGATGTAACTGAAGCTAGTTGTAGAATTTGCGCGATGCCCTTTCGAGGGATGAATGAAATGCGTTATCATGTCATAGACCATGGTTTTGACTTTGATACCTCATATCCAGATGGCGTGTTGCCATTTTTCTTGGACAAGGAGTCCTGGAAGTGCATCATTTGCCAAGAACCGTTCAATAATTTTCTAAAGCTTTATGAACATATGAATATACATTATCAGCATTATATTTGTGCCACCTGTGGCAAAGGTTACATGACAGCGCCTCGCTTGCGTAAACATTCCGAAGTTCACATAACTGGTACTTTTCCTTGCAATAAATGTAGACGAGTTTTTACAATGCGTGCTGCTAGGGACTATCATAAAGCTCACGCTCACGCTAAGGGTCCGCGGTATGAATGTCCTCAATGCAACATGAGATTCGGAGGCTATTATGAAAGAATGAATCATTTGAATGAAGCACACAGAGAAAAGGAAGTGTCTTATAAGTGCGCCCATTGTGAGTTGTCGTTCAAAACGAGCGGAAAAAGGGCTATACATGTGAGATCAGTCCATTTCCCGCAGCAACGTAATTTCGCTTGTCCATTATGTAAATGGTTGTTTAAGACTGGCTATGAGTTAAAAAGACATATGgtcaaacatacaggtCCCGCTAACGCGGATACACAGGGGATAAAAGTTAGGCGGGTTAGGAAGTTAAAGGAGAATGTATGCGCCAGGCAGATACGTCGACGACGGCGTGCTAATAATGAATTACCAGAGGAATCAGAGAAAAGAATAGCTAAAACTATGATGCGTAGAAATGCGATGACGCTCCTAGAATGCTCAACGGCTTGGGCGTTTCGATGGTTTCAAAGCGCGTTCTATTGCTCCTATTGCGATGCTAAATTCGTAGATCCATTAGTTCTACGCGATCACGTTAACTCTTACCACCTTGCTGATTTACCAACAAAACGGATATTTTCAAAATTGACTgaaaataatatgattaaaGTAGACGTCTCGAATTTGCATTGTAGGGTGTGTAACTGTAAATTAGAAAACGTAGACTTTTTAAAGAAACACCTAATAAATAGtcatgaaaaaaatttaaatcaggaTTACAACGATGGTATACTGCCATTTAAACTAGAATCAGATGGTTTCGAATGCCAAATATGTAGTGCACATTTTACGAGTTTCTGTAAAATTAATGAACACATGAACACGCACTTTAAGAATTACATTTGCGACTCTTGCGGCAAAGCATTTGTATCGAAATCGCGTTTTAGAACGCATGTTCAGTCACACGAGATTGGCAGCTTTCCTTGTGGAATATGTGATGAAATTTTAGAAACTAGGGTCGCTAGGATGTGTCATAGATCGAGAGTACACAAAAAGGGCATTAGATACACCTGTCCATATTGCCCTGAAGTTTTTACGTCGTATTACGCGAGAGCAAAGCACTTGGTAGACGGTCACGATCAGCAGAAGAGAGAATATGAATGCTTCACTTGTGGCAAATCCTTTGAAACAAGCTGCAAACGCGCTGCTCATACTCgcgATGGCGACACAAGGGAAATAACAGTTAAAATTGAATGGAAAAAAACTCGGAGGGCTACAGAGGATAAGGCGAACGCTGCCTTGATCCTCGAATGTTCGAATGCTGTGGCATTTAGGTGGATGCGCGGGAAATTTATGTGCGCGTACTGCCCTAAAATATGTGAAAATGTTAGCGAAATACGTTTACACAGTCAAACGCACGATAAACTAAACATTTTTCAAAAACAAGAAGTCCGAAACTCATTTCCACTAAGAGTTGATATAACAAACCTTAAATGCAGTATATGCGATAATAGGTTGAAAAACTTAACAGATTTGAAAGATCATTTACAAATCGAACATAGTAAGAATTTTAACGCCTTTGGCGATGGTGTTATTCCTTTCATTTTGACCACTTCTGAATATCGTTGTGTTCATTGCGATACCTTGTTCGAAGGCTATATGAATCTATTTAGCCATATGAATGAACATTACCAAAGTTTTGTTTGCTATACTTGTGGCAAAGGATATTCAGCAAAGCACAAGTTGAGAGCGCATCAGAAATGTCATGAAACTGGAAGAATTGCATGTCCAAAGTGTGATCTTGTATTTGTAAATCATGTTATCAAAAACAGACACGTTGCTACTGCGCACGGTCCGAAGAAGCGATATCGTTGCCCAATATGTGATTTAACTTTCAAGTCTTGCCATTCGCGGTTAAAGCATCTAGACAAAATACACGgACCGATCAAGACGATTAAGTGGAAACGAGGTCGCAGGGTCTATAACGATCATAGAGATAACGCGGCGGTTATATTAGAATTCTCTAACGCCTGTCCTTTTCGGTGGAAACGCGGTGCTTTTGCTTGTTCGCACTGTGCGAGAACGTTTGGTCAATTTCAGGATCTTTTTAACCACGCACAAGAGCACAGTAACCGTCTCGAAGCGATGAGATATGCTCGACCATATGATAATATGAAAGTTGAAGTTAGCAATTTAAAATGTCTTGTTTGTCAAGAAAGTATGAAAGGGATAGAGCAACTCAAGGATCATTTACTAAACGATCATCAAAAGCCGATCCAGAAAGGCTTGGGATTGGGTGTAACGCCGTTTCTTCTACAGGGCAAAGATATGCTCTGTACGCATTGTGATGaacgtttttcatttttttctacGTTAAACAGTCACATGAATCAACATTATCCAAATAACATTTGTTTTCACTGCGGGAAATCGTTTTCGGCTGCTCATCGTTTAAAAGCTCATCAACTTACTCATGAAACGAATGAAAAGGAGCATAAATGTTCAAAATGCGATGAAGTCTTCGAATCAAGAACGGCACGACGTAACCACATCAACACAAAACACGCACCAGAAAACCGTTACAAATGTCCATATTGCAATTCCTCCTTTAAAAGATATTCGGAAAGATTAAAACATTTGAAAGAAATACACAACCAGTGCGTCGAATATCCTTGTCACTTGTGTCCCTCAATTTTCGCTATGTCTGATCAAAGAactaaacatataaaaaatgttcatataaaacataaacaatTCCAATGCGACTATTGTCCCAGTAAATTCGTGACTGCTGGCCAGTTGAAGAGTCATTTGGTGAAGCACACTGGAATTCGAGAGTATCAGTGTACCGTATGTAAAAAGAGCTATGCAAGAGTTAGAACATTAAAGGAACATATGCGTATACACAATAACGATAGGCGTTTTGTATGCGAGTATTGTAATAATGCCTTCATTCAGAAGTGCAGTCTTAAAAGCCACATGCGAACTCATCACCCTACTGTAGAACCTACCAAGGCTAATACTTAA
Protein Sequence: MAYNHNISIYYQNCRGLRTKLHTLFMNILAYSYDIIILTETWLHTDISDSEYIDNRYLTFRADRDREASGRLDGGGVLIAVRRALCAGCALAPIAPIPSIIDQVFIELQLANKYYYIGAVYIPPKQNQQVYYDYFNALQNKILDEEIRRALESLDVSKGAGVDNIPSIFFRETATVIDQPLHYLYNKCISDGIFPNIWKSARIVPVHKGGTKSDIENYRPISILPVLSKVFERLVHNAIYPFLHNNILQQQHGFVKRRSTITNLLTYTTDLFDGLDANTQIDSVYTDFRKAFDRVDHRILLEKIAYNGIRGNLWRWLKSYISNRTQRVVVGGCESSTSSVSSGVPQGSILGPLLFVIFINDINKCFLNSKFLLYADDLKIYRKINIYQDHVLLQEDLDRFTTYCYENKLELSLNKCKSISFTKRKTVSSFTYSLCDTDIDKVQNIRDLGVTIDNKLHFDTHIYNIISKAFQMYNFVMRSSTEFRHPSTLVYLFKSLIRPQLEYAVAIWNPFYIKYERSLERVQKKFLRHMNYKCYRKRMPYESLLRKYKLLDLKSRRLQLEAMLLYDLCNNKYDCMNIVNKIRYSVPSRAHLRPSRHYQFFAVTRSRTNAEERNVHIKTQHTTLPYMCVYCKDKPRFATWELRKRHLMEIHNYKPGAEMYECTTCHMMFKTRSQKYHHNVKVHRTKKEIDFGFSCGERGKTENKIAIKLETSESYVEKDSSKVTEKKRYQRSARAEARFVTKKNASSILECWTLCPFRWKRNRFKCAYCEDNFTECAELRNHVRLCSTQHSVKDIYSKFKEMSLINIDVTEASCRICAMPFRGMNEMRYHVIDHGFDFDTSYPDGVLPFFLDKESWKCIICQEPFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCNKCRRVFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSVHFPQQRNFACPLCKWLFKTGYELKRHMVKHTGPANADTQGIKVRRVRKLKENVCARQIRRRRRANNELPEESEKRIAKTMMRRNAMTLLECSTAWAFRWFQSAFYCSYCDAKFVDPLVLRDHVNSYHLADLPTKRIFSKLTENNMIKVDVSNLHCRVCNCKLENVDFLKKHLINSHEKNLNQDYNDGILPFKLESDGFECQICSAHFTSFCKINEHMNTHFKNYICDSCGKAFVSKSRFRTHVQSHEIGSFPCGICDEILETRVARMCHRSRVHKKGIRYTCPYCPEVFTSYYARAKHLVDGHDQQKREYECFTCGKSFETSCKRAAHTRDGDTREITVKIEWKKTRRATEDKANAALILECSNAVAFRWMRGKFMCAYCPKICENVSEIRLHSQTHDKLNIFQKQEVRNSFPLRVDITNLKCSICDNRLKNLTDLKDHLQIEHSKNFNAFGDGVIPFILTTSEYRCVHCDTLFEGYMNLFSHMNEHYQSFVCYTCGKGYSAKHKLRAHQKCHETGRIACPKCDLVFVNHVIKNRHVATAHGPKKRYRCPICDLTFKSCHSRLKHLDKIHGPIKTIKWKRGRRVYNDHRDNAAVILEFSNACPFRWKRGAFACSHCARTFGQFQDLFNHAQEHSNRLEAMRYARPYDNMKVEVSNLKCLVCQESMKGIEQLKDHLLNDHQKPIQKGLGLGVTPFLLQGKDMLCTHCDERFSFFSTLNSHMNQHYPNNICFHCGKSFSAAHRLKAHQLTHETNEKEHKCSKCDEVFESRTARRNHINTKHAPENRYKCPYCNSSFKRYSERLKHLKEIHNQCVEYPCHLCPSIFAMSDQRTKHIKNVHIKHKQFQCDYCPSKFVTAGQLKSHLVKHTGIREYQCTVCKKSYARVRTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHMRTHHPTVEPTKANT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -