Basic Information

Insect: Mellicta athalia
Gene Symbol: -
Assembly: GCA_905220545.1
Location: HG992184.1:3133888-3157602[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.6e-05 0.012 17.4 1.5 1 23 399 421 399 421 0.96

2 20 0.0066 0.81 11.6 0.7 1 20 427 446 427 449 0.94

3 20 2.5e-05 0.003 19.2 5.4 1 23 468 490 468 490 0.98

4 20 4.1e-05 0.0051 18.5 4.6 1 23 496 518 496 518 0.99

5 20 4e-05 0.0049 18.6 5.3 1 23 524 546 524 546 0.97

6 20 1.3e-05 0.0016 20.1 7.3 1 23 552 574 552 574 0.97

7 20 8.3e-07 0.0001 23.9 2.9 1 23 580 602 580 602 0.97

8 20 0.00011 0.014 17.2 6.7 1 23 608 630 608 630 0.97

9 20 0.00037 0.046 15.5 5.5 1 23 636 658 636 658 0.97

10 20 5.5e-07 6.7e-05 24.4 1.9 1 23 664 686 664 686 0.98

11 20 1e-05 0.0013 20.4 7.9 1 23 692 714 692 714 0.98

12 20 6.4e-06 0.00079 21.1 6.5 1 23 720 742 720 742 0.98

13 20 3e-05 0.0037 19.0 6.6 1 23 748 770 748 770 0.98

14 20 0.00021 0.025 16.3 7.0 1 23 776 798 776 798 0.97

15 20 2.5e-05 0.003 19.2 7.1 1 23 804 826 804 826 0.97

16 20 3.4e-06 0.00042 21.9 6.0 1 23 832 854 832 854 0.98

17 20 2.6e-05 0.0032 19.2 7.9 1 23 860 882 860 882 0.98

18 20 1.1e-06 0.00013 23.5 4.6 1 23 888 910 888 910 0.98

19 20 0.00043 0.053 15.3 0.4 1 23 917 939 917 939 0.96

20 20 0.029 3.6 9.6 5.3 1 23 949 971 949 971 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.6e-05	0.012	17.4	1.5	1	23	399	421	399	421	0.96
2	20	0.0066	0.81	11.6	0.7	1	20	427	446	427	449	0.94
3	20	2.5e-05	0.003	19.2	5.4	1	23	468	490	468	490	0.98
4	20	4.1e-05	0.0051	18.5	4.6	1	23	496	518	496	518	0.99
5	20	4e-05	0.0049	18.6	5.3	1	23	524	546	524	546	0.97
6	20	1.3e-05	0.0016	20.1	7.3	1	23	552	574	552	574	0.97
7	20	8.3e-07	0.0001	23.9	2.9	1	23	580	602	580	602	0.97
8	20	0.00011	0.014	17.2	6.7	1	23	608	630	608	630	0.97
9	20	0.00037	0.046	15.5	5.5	1	23	636	658	636	658	0.97
10	20	5.5e-07	6.7e-05	24.4	1.9	1	23	664	686	664	686	0.98
11	20	1e-05	0.0013	20.4	7.9	1	23	692	714	692	714	0.98
12	20	6.4e-06	0.00079	21.1	6.5	1	23	720	742	720	742	0.98
13	20	3e-05	0.0037	19.0	6.6	1	23	748	770	748	770	0.98
14	20	0.00021	0.025	16.3	7.0	1	23	776	798	776	798	0.97
15	20	2.5e-05	0.003	19.2	7.1	1	23	804	826	804	826	0.97
16	20	3.4e-06	0.00042	21.9	6.0	1	23	832	854	832	854	0.98
17	20	2.6e-05	0.0032	19.2	7.9	1	23	860	882	860	882	0.98
18	20	1.1e-06	0.00013	23.5	4.6	1	23	888	910	888	910	0.98
19	20	0.00043	0.053	15.3	0.4	1	23	917	939	917	939	0.96
20	20	0.029	3.6	9.6	5.3	1	23	949	971	949	971	0.99

Sequence Information

Coding Sequence: ATGAATCCCGATCATCACAATATAAATACGGGTGGTGGCCAACCCCCAGGCAATTCGGagGCTCAGAATCAAAGAGTGCAATCGTCACAGCAGCAACAGCAGGGTCAAACCAATAATTTGACTCCGACAACATCTGCTACAGACTTGAGAGTTAACTCGGCGGCGGTAAACGTTGCTTTGTCAAGCGTGGCTAAATACTGGGTGTTTACAAATTTGTTTCCTGGTCCTATACCTCAAGTTTCTGTGTATGGATTGCCAACAGGTGCAAGAATTGAAAATGGAAAGCCTGTTCAGGATCTTGGTCAGGCACATGCAAGCCTACTCAACGGAGATCCTAATATAATATTAGGACATGCAGGACAACAACAAGTCACTGTTTCGGCAGGAGGACAACAAATACCTGTGTCTCAAATAATTGCTAATCAAGCAACACAAGGGCatgAGTCGCTGGTGGCGCACGCGGACGGCGGAGCGTCGACGCAGGTAGCCAACAATCGGGTCGAGTTTGTACAACATAACATTGATATGGGTCATCACTCCCAACAACATATCATGCAACAACAGTTGATGGCTGCTGCTCGTCCGGAACATTCAAATCAGCAGATCCAGCTGACGGTGAGCGAGGACGGCATCGTGACGGTGGTGGAGCCGGGCGGCAAGCTGGTGGACAAGGAGGAGCTGCACGACCCGCTCAAGCTGCCCGCAGACAACACGCTCACCGTGCACCAGCTGCAGCAGATCGTGGGACACCACCAGGTGATAGACAGCGTGGTCCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCCTGGTGACGCAGAACGCGGACGGCACCACCTCCATCGAGACCAGCGCCGCCGAGCCGCTCGTCAAGGACGAGAAGGGCGCCAAGCTCGAGGCGGCGCACTTCGCGCTGCCCGCCGACATCAAGGACATCAAGGGCATCGACTTGAAGAGTGCTATGGGCATGGAGGGCGCGGTAGTCAAGATATCGACCGGCACAGAACATGATCTTCACGCCATGTATAAAGTCAACGTAGAAGACCTTTCGCAACTGCTTGCCTATCATGAAGTCTTTGGAAAACTCAATTCTGAGGGCCAACCACAAGCAAAGGTGGGGGGCGAGGCGGAGGCGGAGGCGGGCGCGGGGCCCAGCGGCGCGCTGGCGGACGCGGAGGCCTCGCCCGGCCACCACGCCTGCGACATCTGCGGGAAGATCTTCCAGTTCCGGTACCAGCTCATCGTTCACAGGCGCTATCACGGTGAAAGTAAACCATTTACGTGTCAAGTGTGCGGTTCTGCATTCGCTAATCCAGTGGAACTATCAAAACACGGAAAATGTCACCTTGCCGGCGACCCTGCCGACCGCCAAGCGAAACGGTTAGCACACGACAAACCGTACGCCTGCTCTACTTGCCATAAAACATTTTCTCGAAAGGAACATCTCGACAATCACGTCAGGAGCCATACTGGAGAAACGCCATACAGATGCCAGTACTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCACATGAGATCACACACAAATGACACTCCGTTCAGGTGTGACCTGTGCGGCAAGTCCTTCACCAGGAAGGAACACTTCACCAATCACATACTGTGGCACACTGGTGAGACACCGCACCGCTGCGACTTCTGTTCGAAGACGTTCACCCGCAAGGAGCACTTACTGAACCACGTCCGGCAGCACACCGGCGAGTCCCCTCACCGGTGTAGCTTCTGTGCGAAGTCCTTCACGCGTCGCGAACACCTCGTCAACCACGTGCGCCAGCACACGGGCGAGACACCCTTCCAGTGCGGATATTGTCCCAAGGCGTTCACGAGGAAAGATCATCTCGtGAACCATGTCCGTCAGCACACGGGAGAGTCGCCCCACAAGTGCACGTACTGTACGAAGTCGTTCACTCGTAAGGAACATTTGACCAATCACGTGCGACAGCACACCGGGGAGTCCCCGCACCGCTGCAACTACTGCGCCAAGTCATTCACTAGGAAAGAGCATCTTACTAATCATATAAGACAGCATACGGGGGAGACTCCTCACAAGTGCACGTATTGTTCTCGCGCCTTCACGCGAAAGGAACATCTCACCCAACACGTCAGACAACACACCGGAGACATGCCACATACTTGTTTACACTGTTCCAAGAGTTTCACGAGGAAAGAACATCTTGTCATTCATGTGCGaCAACACACTGGAGAGACGCCCTTTAAATGCACCTACTGTTCCAAATCATTTTCGCGCAAAGAGCATCTAACAAATCATGTGCACCTTCATACGGGCGAAACGCCGCATAAGTGTCCTTTCTGCACTAAGACCTTTTCAAGGAAAGAACATTTGACCAATCACGTTAGaataCACACCGGTGAGTCGCCACATAAATGTGAATTTTGCAACAAAACATTCACTCGCAAAGAGCATCTTACGAATCATCTCAAGCAACACACCGGCGACACACCGCACACTTGCAAAGTGTGCTCTAAGCCATTCACCAGGAAGGAACACCTTATGGCCCATATGAGGTCACATAGTTGTGGAGAGCGGCCTTTTAGCTGCGACGAATGCGGCAAGTCGTTCCCATTAAAAGGAAATTTACTTTTCCATGAGCGATCACATAATAAGGGCGCAAATGCTAATAAGTCTTTCAGGTGTGAGGTCTGCTCAAAGGAATTTATGTGTAAAGGTCATCTAGTATCGCACAGACGAACCCATACTGATGCCACTGAAAATGCAGCTAGTACAGAAACGCCGACCGAAGGTGAAGATTGCGGGGACTGCAACAAGTGTGAAAAAGATACGACCGAGAGGCCCGAGAGAAAACACGACATAAgTGCATCTTCAGAGAGTAGAACTTCTGAAACAAATACAGCACAAACTCAAACACCTAGTTCAGCAGTCATGCAAATATCTACCCAGCAAGTTCGAACTGGGACAGCAACTAGCTCGGCAAGTGTGCCCGCTGGCACTTTCTCACACACGCCAAGCACCCAACACCACACCGGTACCACCATAGCCCATCACCCGGTCACCGTGAACTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGNSEAQNQRVQSSQQQQQGQTNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASLLNGDPNIILGHAGQQQVTVSAGGQQIPVSQIIANQATQGHESLVAHADGGASTQVANNRVEFVQHNIDMGHHSQQHIMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPGGKLVDKEELHDPLKLPADNTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNADGTTSIETSAAEPLVKDEKGAKLEAAHFALPADIKDIKGIDLKSAMGMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQAKVGGEAEAEAGAGPSGALADAEASPGHHACDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPADRQAKRLAHDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCNYCAKSFTRKEHLTNHIRQHTGETPHKCTYCSRAFTRKEHLTQHVRQHTGDMPHTCLHCSKSFTRKEHLVIHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHKCEFCNKTFTRKEHLTNHLKQHTGDTPHTCKVCSKPFTRKEHLMAHMRSHSCGERPFSCDECGKSFPLKGNLLFHERSHNKGANANKSFRCEVCSKEFMCKGHLVSHRRTHTDATENAASTETPTEGEDCGDCNKCEKDTTERPERKHDISASSESRTSETNTAQTQTPSSAVMQISTQQVRTGTATSSASVPAGTFSHTPSTQHHTGTTIAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_00985351;
80% Identity: -