Math012591.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992183.1:3291348-3293852[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.13 1.2e+02 4.1 0.0 16 30 162 176 158 180 0.88 2 9 0.56 5.6e+02 2.0 0.0 16 28 197 209 194 213 0.88 3 9 0.12 1.2e+02 4.2 0.0 16 30 232 246 229 253 0.88 4 9 0.13 1.2e+02 4.1 0.0 16 30 267 281 263 285 0.88 5 9 0.12 1.2e+02 4.2 0.0 16 30 302 316 299 323 0.88 6 9 0.13 1.2e+02 4.1 0.0 16 30 337 351 333 355 0.88 7 9 0.13 1.3e+02 4.1 0.0 16 30 372 386 369 390 0.88 8 9 0.13 1.3e+02 4.1 0.0 16 30 407 421 404 425 0.88 9 9 0.13 1.3e+02 4.1 0.0 16 30 442 456 439 461 0.88
Sequence Information
- Coding Sequence
- ATGTACGTTAGTTTTCGCAAACGGGAGGCAATAACTTGTATCTGGTTCTTCCAAGTAAGATTTTCGTCCACCTGTACGCCAAGATATTTTACAACACTAGAGCGAGTTATATTGCTACAGCTGCAAATACTGTGTCCGAGACAGCATTTATTTGCGGTTATAGAGAAGGAATTGGGAGGTAAAGAGGGCTTGCAGCCAAATGTTACAAACACAGTCTTATCTAAATTTAGAGTCAGGATGTTGTTAGACAACCAACTCATTATGACAGTGAGAGCCATTTCGCCATGCCCACGCGTCTCAGTCCAATTTTTACCATGGACGAGAAGAACAGTGTCATCTGCATATGATACAATTTTACAGTTTGGTATTTTAAGATTGCAGAGGTCATTTACGTATATCAAGAAGAGAGTGGGACCCAATATACTACCCTGTGGTACTCCATATGTGCAGGTTGCGCGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGCCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGCGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGCGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAGTGCAGTGTGTAGTGTGTCGTGCGGTGTACGTACGGTCCCGGTCGCTACCACAGGCGGTGCAGGTGCAGGTTGCGGGAGAGCACGGAGCGCACGTCGTGTTGCGGGAGAGCACGGAGCGCACGTCGTGTCGGTAG
- Protein Sequence
- MYVSFRKREAITCIWFFQVRFSSTCTPRYFTTLERVILLQLQILCPRQHLFAVIEKELGGKEGLQPNVTNTVLSKFRVRMLLDNQLIMTVRAISPCPRVSVQFLPWTRRTVSSAYDTILQFGILRLQRSFTYIKKRVGPNILPCGTPYVQVAREHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRPRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAREHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAREHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVSVVQCVVCRAVYVRSRSLPQAVQVQVAGEHGAHVVLRESTERTSCR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -