Basic Information

Gene Symbol
-
Assembly
GCA_905220545.1
Location
HG992203.1:7864356-7868892[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.04 96 4.6 0.0 22 45 343 367 338 368 0.86
2 6 0.0012 2.8 9.5 1.7 3 43 413 462 411 464 0.70
3 6 0.13 3.1e+02 2.9 0.0 23 45 591 612 579 613 0.87
4 6 6.7e-05 0.16 13.5 0.4 3 44 664 714 662 716 0.80
5 6 0.0011 2.6 9.6 0.0 14 45 836 874 830 875 0.86
6 6 9 2.1e+04 -3.0 0.0 26 44 1057 1078 1055 1079 0.75

Sequence Information

Coding Sequence
ATGGAAAAAATTGTGGTTAAAACAGAAGTGCAACCTAACGGTGACATTCTGCTATTTTATGTTGATGAAAACGAAGAACCAGATCTACGCGCACTGGATGGCGTAGATCAAAGTAATGTGCAATTATTGCCTGACACTAAATATATCATTGAAGAAGACCTCGGGGACGGAGAGTCGGCTGAAGAGCAAGATATTGCTCAAGCAACTGAACAAGCTTCTAATGAAGTCTGGCTCGACGATGAAATCAAACGCCTTGTTGTATTTTACATCGACAATAAAGATACGTTTCTCAGTGGAACGACAAAGAAAACACATCTATGGGCTGTTGCCTGTAAAACAATGCTGGCCGGTAAACATCCTATTTCATGTGAAGTAAAGTTAAggcaattaaaaagtaaatacgcCGAAGCTTGCATGTATGGAGGAGCAGTTGAGTTTCCTTACTATGATCTGTGTCATCGAGCATTTCATGACGATAGTTACGTTAAAATGTGTCTTAATGACTTAAATCAAATGAACCAAGTTACTATGAATTTGCCTGTTAATAATGTTGTTAATCAAGATGGAATATTAGTTGTTAAGAAGGTTAATACAGTTCAAAATCGAGATGAACAAGTCGAGGCTATGTTAAATTCATACATCAAGCATAAGGATTACTTCCAAAAACAGTATAATAGTCAAAAAGGTATATGGGAAGCTATTGCTATGGATTTAGGTGAGGAAGACGTAGATTACTGGCATAAACGTTTCTTAAATTTCAAACAACACTACATAAGAATGGTGTGTAAACGTAAAGAAAGTGGTGCTGAAAGCATCAATTGGCCATATATGAAATACTTTGACCAAATATACGGTGACGATGAAGAATTCATAAGAAAGTATTTGGAAAATGATTCAAATACTGCTAATGGTCCTACTACTACACAAGAAAATAATGACAATTCTTGGTTAGACGTAGAAACAACGTTTTTGgttaaatattactttgattGCTTCAATGAATTCCTGGACCGAACCATACCAAATAAGTTCTTATGGCAAGAAGTTGGTAGATTATTAGATAAGTCACCAGAGAGTTGTGAGAAAAAGTTCAATGAACTTAAAAATGAACATTTTAATCAACTTATACAAAGTGGATATGATTTAGCAAATAGAATACCATTAGcaattttatttgataatataATTGCTAGGGAAGTAGAAATTGAGGTGAAAAATTCCGGTAATTACACCGATGAGTGGAAAATGGAGGAAATTGATGAATTAGTTCAATATCTTTATGAAAATATAGATATGCTAAAAGATACTGTATGTTATTATGTTTGTTGGGCGGTTCTTGCTCGGAAATTGAATAGAAGTATTACATCTTGTAGAAAACAATGGAATGGTCTGACTACACTTTACAAGAGTATCCTAGAGGATAAAAAGGAAAATCCAGACATGCAGATAGACTggaggtacattgatttatttGATAGAATATTTGATTACGGTATGGATAGCAACCTACTGGATGGTTATGAAAAGTTAAAAGAACTGAATAAGGCTAGCAATGAACCAAGCAAAGTTGGagTCAAAAAGATCACCATTAAAGATAAGGATGATAAATTCATGGATAATGGCACAGAGGACGAAGAATCTTATGACGAAAGAGGATTCACAAAGCGTTCTAAGAAACGGACAGGTGATAGCAAAGCCTTCAAAATACTAGAATTCTACTTAAAAAATAAGGATAAATTTGCATCGTCCCAGCAAAAGAAATTAGCCCTATGGGAAGTTTTGGCAAGACAAATAGGAGTTACAGCAACCGAATGCGCGCATAGATTTCGTAATTTCAAACAAGTTTACACGGGATACGTTCAAAGGGAAATAAATAAGCCAGAAATGCCCATTTTGTGGCCATATTACAATCTTTGCAAGAAAGTGTTTGGCTACAGAGCCATAAAATCTAAGTTGAAGAATGGAAAAATGGATTCAGACGATCCTGAAGACTGGTCTGCTAAGGAAATCAAacaattgattaattatttttctagaaATTTCCACAATTTCCAAGAGAATATTGAAGAAAGAAGCAAATGGACCGAAATCTCTCACGAAATCGGTAGGACGGAATCAAGCTGTTGTGATAAGTTCCTCGAATTAAGAAAGTCCTATAGAAAGTTGAAGACAATGAAAGCTCGTAATCCAGACGTTAAAGTATCGTGGAAATATTTTAACATGTTagatgatatttataaaaatgctgAACAAAATTCAGAAGTTCTAGAAACTATGGAAGTCGATGACGATGTTTACAACGGTGGTATCAAGTTGGAAGCACAAGAAGATGACGATTTCCAATGCATTATCGTTATACCAGAAGGCGAAGATATTAACAATGCACAAATCATCATTCAGGAAAAAGATCAAGACCAAATTCTAAGTAAAGAGGAAACATTAAGGAAGCAAATTATAACTAAATGGAATAAACGCAGCAAAAAACGACTTTTGATTCTTTACTTGAATTATCTAAGAATGCATAAAGGACAAGATATAAATGCAAGGGAAATGTGGACAGAAATAGCATCAAAATTGGATGAAAAAACGCCTATATCTtgcaagaaaatgtacttaaaacTGAAAAATCGACATAAGCAACTAAGTGGTACAGATTTAAAAACTCCATACTCTGCTCTTATAGAGAAAATTCTCACTTTTAAACCCAAATTCGTAAAATTTAATAACAGTCAGGATTTGGAACAGATGAATGCATTTGAAGACATACCAATGTCTGATGAAAAAGTTTATAATGCGTTGAATTATTACTTACAAAACATTGAAGATTTTGTGAGTCCTAAAtttgaacaaaaatatttatggaCTGAACTTGCTAAATTTATCTCCGAGCctgtaaacaaaatttatagcaaaataaattacttaaagcAGAGCTTTAACAGTGAAATTGATACACCGTTCAGAGATATTTTACAAGAAATATTGACAAAAGAACATGCACTTAGAGAAGAAAATAATAAGGACCTAAATCCAATATCAGAAGAGGAAAGTGAACAAACTTGGTCGGATATTGAAACTGAAAGACTTCTAACTTGGTATTTGGCGCATTTAGACAAATTTAAGAACCCAAAATTTGTAAGAAGCTACTTGTGGATGGAAGCTTCAGATATATTAAAGAAGAGTCCCTTAGTTTGTTCCAAGAAAATGTCGGAAATACGGTCACAATACAGAACTATGGTGAAAGAAAATCCTGAAGAACTTGACAGTTGGAAATTTTATAACTTATGTCAAAGAATTTATGGGACTGGAAAGAAAAGTACTTTAAGTAGTAATAAAGGGCTTgaagaaatttaa
Protein Sequence
MEKIVVKTEVQPNGDILLFYVDENEEPDLRALDGVDQSNVQLLPDTKYIIEEDLGDGESAEEQDIAQATEQASNEVWLDDEIKRLVVFYIDNKDTFLSGTTKKTHLWAVACKTMLAGKHPISCEVKLRQLKSKYAEACMYGGAVEFPYYDLCHRAFHDDSYVKMCLNDLNQMNQVTMNLPVNNVVNQDGILVVKKVNTVQNRDEQVEAMLNSYIKHKDYFQKQYNSQKGIWEAIAMDLGEEDVDYWHKRFLNFKQHYIRMVCKRKESGAESINWPYMKYFDQIYGDDEEFIRKYLENDSNTANGPTTTQENNDNSWLDVETTFLVKYYFDCFNEFLDRTIPNKFLWQEVGRLLDKSPESCEKKFNELKNEHFNQLIQSGYDLANRIPLAILFDNIIAREVEIEVKNSGNYTDEWKMEEIDELVQYLYENIDMLKDTVCYYVCWAVLARKLNRSITSCRKQWNGLTTLYKSILEDKKENPDMQIDWRYIDLFDRIFDYGMDSNLLDGYEKLKELNKASNEPSKVGVKKITIKDKDDKFMDNGTEDEESYDERGFTKRSKKRTGDSKAFKILEFYLKNKDKFASSQQKKLALWEVLARQIGVTATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYNLCKKVFGYRAIKSKLKNGKMDSDDPEDWSAKEIKQLINYFSRNFHNFQENIEERSKWTEISHEIGRTESSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNMLDDIYKNAEQNSEVLETMEVDDDVYNGGIKLEAQEDDDFQCIIVIPEGEDINNAQIIIQEKDQDQILSKEETLRKQIITKWNKRSKKRLLILYLNYLRMHKGQDINAREMWTEIASKLDEKTPISCKKMYLKLKNRHKQLSGTDLKTPYSALIEKILTFKPKFVKFNNSQDLEQMNAFEDIPMSDEKVYNALNYYLQNIEDFVSPKFEQKYLWTELAKFISEPVNKIYSKINYLKQSFNSEIDTPFRDILQEILTKEHALREENNKDLNPISEEESEQTWSDIETERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMSEIRSQYRTMVKENPEELDSWKFYNLCQRIYGTGKKSTLSSNKGLEEI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985050;
90% Identity
iTF_00985050;
80% Identity
-