Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_905220545.1
Location
HG992182.1:19633102-19637124[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-06 0.0036 18.7 0.0 2 35 285 321 284 326 0.85
2 2 5.3e-10 1.3e-06 29.8 0.1 2 43 366 412 365 414 0.89

Sequence Information

Coding Sequence
atgcgTTGTTggcttttattattgtttagtttaatATTAAGTGTTCGTGCGTGGGATGACGACGATTTGGAAGTATTCGACGTGGTTGAAGAAGTAAATCAaaatttttatgaatttctCGGCATTTCACAAgaTGCTTCGCAATCGGACATTAAATCAGCCTTCAAAAAGTTGACGTTAAAGTTGCACCCAGATAAAAATGATTCACCTGATGCAGACGTTCAATTCAGGAATTTGGTTTCCATTCATAACATACTTAAGGATCCTGGAAAAAGAGAAAAGTATAATGAGGTCTTAGTAAACGGTCTTCCAAACTGGCGGTCAGCCGTCTATTACTATAGACATGTAAGAAAGATGGGCCTAGCCGAGGGAtctattatactttttataatcATAACATTTGGCCAGTATGCTGTTGGCTGGGCTGCTTATCTAGAAAAGAGGTTTACAGCtgAGCAAATTTTGAATAGTAGAGGCAAAAAATCGAAAAAGTCAGGCTTTGATACAGGCATAGCGGAAATATTAGATATGTTACCTAAGCCCAGTATAAAGGATACATTACCTTTTCAAATACCGAGAGGAATATGGTGGACTATCACGGCCATCCCTCTCGCTATCTCTGAGTTGAAGCGACGAAGGTTGGAggaaatagaaaaaaagaaaagaaaaaagaaaatGGAGGAAGAAGAGCGCCTCCGAGCTGAGCGTGAAGTAGAACAAGTCAGCACTGCGCGAAGGCGACGAGCTTTCGTGCCGCCTGCCAGGGACTGTCTGCTGGATCCGGGGGCAGAGCCAGAGGAAGCCGCCCCCGTACCTGTGCCCGTCAAACCTTCCCCTCCAGTGATATCAGGTGGTTTGTGGACGGACGACGACTTAGCGGAACTGGTTCGTTTGGTTAAAAAGTACCCTCCAGGAGCCGCTGAACGTTGGGAAAGAATCGCTGAATCTATGTCCAGAAGTGTTCCCGAAGTCACGCATATGGCCGCTAAATTGAAGGAAAACTGCTATAAGTTGCCAGGACAAGATACTGTTGAGGAAACTCCTCAAGAACCACCTAAAAAGGTGAAGACTCGTAAAGCGGAAGAGACGAGTGGAGGCAACTGGACGCAAACACAGCAGAAAGCGCTTGAAGCCGCTTTAGCCAAAAGTCCTAAGGGTTCCTCCGGCGATCGTTGGCAAAAGATTGCCAATGCTGTCCCAGGGAAGACAAAGGAGGAATGTATGCAAAGGTGCAAATATTTGTCAGAGCTTTTaaggaaacagaaacagaaagAAGAAGAGGAAATGCAAAACAAAAACGCAGAAGATAACGACAAAGAGACAGAACAAGAatctttaaattaa
Protein Sequence
MRCWLLLLFSLILSVRAWDDDDLEVFDVVEEVNQNFYEFLGISQDASQSDIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSIHNILKDPGKREKYNEVLVNGLPNWRSAVYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYLEKRFTAEQILNSRGKKSKKSGFDTGIAEILDMLPKPSIKDTLPFQIPRGIWWTITAIPLAISELKRRRLEEIEKKKRKKKMEEEERLRAEREVEQVSTARRRRAFVPPARDCLLDPGAEPEEAAPVPVPVKPSPPVISGGLWTDDDLAELVRLVKKYPPGAAERWERIAESMSRSVPEVTHMAAKLKENCYKLPGQDTVEETPQEPPKKVKTRKAEETSGGNWTQTQQKALEAALAKSPKGSSGDRWQKIANAVPGKTKEECMQRCKYLSELLRKQKQKEEEEMQNKNAEDNDKETEQESLN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00843482;
90% Identity
iTF_00985046;
80% Identity
-