Math020229.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992189.1:312550-313719[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-07 0.00013 22.9 0.1 2 44 17 59 16 60 0.94
Sequence Information
- Coding Sequence
- ATGGTACGAAATTATATAAGAAAAACCGATCGAGCGGCTTCCTATAGTAGAGAACAATTATTAGAAGCAGTGGAAAAAGTTAAGAACGGCGAGTTGTTAGCTTATAGAGCTTCTTTGGCATACAAAATTCCCCGACCAACCATAGTAGCCCGAGTCTACGGTAGATATGGATTAAAATCTGACTCTTTAGGAAGAAGTACGTTTCTTAGTGCAGAGACAGAGAAAAAATTAGCCAAAAACTTACATATTATGGAAAAATATGGATTACGTCTCACCAGAGAAGAAACATTTGAGCTTGTTGGACAATATATTGCCAAAAATAATATccctaataattttaaaaacggCACGCCAGGAGAAGACtggtttttatcatttaaaaagcGGCATGCTTTGTCGGTTAAGAAACCTCAAGCCGTGGAAAATTCGCGTAAAAAAGCATGTAACCCGTGGGTTATTTACTCATACTttgatttattgaaaaataccTTGGACGAGCTGGAGCTACACGATAAGCCTGAACAAATTTGGAACTTGGATGAAACTAGTTTCAGCAAGGATCCCAGCAAAACCAAAGTCGTAGGCCTTCGTGGTTATGCTTCGACAAGAACAATCACCTCACCCGGCAAAGATAACACAACAGTTTTGTTGGGATGCAGTGCAGCTGGTGGTAAAACTCCTCCGCTTATAGTTTATAAGGGCAAAAATCTCTGGGACGAATGGATTTCGGCAGAGGGTTTTCCTGGAACTGTTTATGCGGCTACTACGAACGGATGGATGGAGAGTGAGGtgtttgaaacattctttcaaAAGGTGTTTCTACCCACCGTAGGTGATAGACGGCCAGTATTATTGATATACGATGGCCACTCTACGCATGTGGTGATCAATATTATTGAAAAAGCACGAGAAGCCGACATTACCATTATGAAAATTCCACCACACACGAGCGATAACTTGCAGCCGTTGGATTTGGCCGTCAACAAGTCTTTTAAAGACAAATGGGACCAGAGTTTAGTAAAGTGGCAAAGGCTACATGTTGGTCAAGCGTTGCCTAAAAAAGGATTTTCCAAGTTGATTGGTCAAGTCTGGTCCCAAATTGATCCCCAAGTTTGTGTAGCTGGGTTCCGTAAAGCCGGAATTTTTCCCTTTAATAGCAACGCAGTGTAG
- Protein Sequence
- MVRNYIRKTDRAASYSREQLLEAVEKVKNGELLAYRASLAYKIPRPTIVARVYGRYGLKSDSLGRSTFLSAETEKKLAKNLHIMEKYGLRLTREETFELVGQYIAKNNIPNNFKNGTPGEDWFLSFKKRHALSVKKPQAVENSRKKACNPWVIYSYFDLLKNTLDELELHDKPEQIWNLDETSFSKDPSKTKVVGLRGYASTRTITSPGKDNTTVLLGCSAAGGKTPPLIVYKGKNLWDEWISAEGFPGTVYAATTNGWMESEVFETFFQKVFLPTVGDRRPVLLIYDGHSTHVVINIIEKAREADITIMKIPPHTSDNLQPLDLAVNKSFKDKWDQSLVKWQRLHVGQALPKKGFSKLIGQVWSQIDPQVCVAGFRKAGIFPFNSNAV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826852;
- 90% Identity
- iTF_01302264; iTF_01248027; iTF_00751994;
- 80% Identity
- -