Math024332.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mellicta athalia
Gene Symbol
-
Assembly
GCA_905220545.1
Location
HG992191.1:13904130-13912322[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-07 7.8e-05 23.7 0.0 12 43 387 418 376 420 0.84

Sequence Information

Coding Sequence
ATGGTAGACATCGATAAGACCTGTCGTACATGTATGAAAAGAGATGTTGTGCTAGTGGACTTGTTTGGGcctttaaaaattgaaaattattgcTCTTTGAAACTAGCAGATATTTTAATGGAGACTATCCCCTTGCAGGTGAGCAATGAAGATGGTCTACCACAAAATCTTTGCGATGAATGTGTAAAAACATTGCAATTAATGTTTGCATTTAGAAATCAAGCTCTCCATTCCGAAagtgaattaaaaaaacttatcgttttaaataataaaataaaaaatgaagatGTTGACTATCATTTAGAAACTGACTTTGACTTGTTTGGTTGTGAGGATTTGTCGTCTGATGATGTGCAATCACTACCAGATACAGAAAATAAAGTCAAGATATACAATTGCGTTACATGTGATAAAAAGTATACTGACTATGAAAAGTATTTAAGACATAAATCTGGCCATGATGACCCTTCAAAATCACAccaaaaatgtggtaaaaagtCTCATAGAAATTCGCTATTGAAAGTATGTGAAATTAAGCACTGTGAAACCGATGATATTGTCAATGTTCAATCAGATGCCAAGCCAGAAGATATCCAGGTTGAAATTAAATTGGAAAATGATGAACACAAGTGCTCTGAATGTTCATTATTATTTCAATCCCGTAATCAATTATTGTCACATTTAAAAGAACATGATAGCAGTAAGTCAACGGATCAAAATGTTATCACATCAATCCAGCAACACAATGTACTGGACAAAATAgCTTTCACACAGCTGTGTGCTTTGAAGGATCACATCAGAACACATACCGGCGAGACTCCGTACCTCTGCTCTGAGTGTGGGAAGGGTTTTAAAAACAGTTCCAATCTGCGGCAACATCTGGCGCGTCACTCTGGTCTTAAGCCATTTTCATGTAATCTTTGCTCTAAGACATTTTGTACCAAAGGTCAAGTAAATAGTCACATGTTGTCACATACAGGCGTTCAGCCGTACAAGTGTAACGAATGTGGATCGTCGTTTACAAAGTCTACTTCATTGAAGAAACACAAACTAATACACCTCGGCTTGAAACCATTCGCATGTGATAGTTGTGATATGAGaaagagacgaAAAATTGGAAATAACACTGAAAATGATATAAGACGTGGAATCGTATTGATTAGAAGTGGAATGTCCATACGTCAAGCAGCGAAAAATGTAGAAGTTCCGTTCACTACGTTAAAACGTTATTACTGGAAGACGAAAAATGATGTTTCGCTTGAAGAACAGCTTTTACAACCAAACTATTCTGTAAATAAAGTTTTCACGGCAACACAAGAAGAAGAGTTGAAAGATTATATCAACCATTGcgctttattattttatggaatGACCTCGAAAGAATGTCGACAATTAGCGTACCAATGTGCTACAATCAAGAAAATAAAAGTACCTGACTCATGGAAAAAAAATGGGATGGCAGGAAAAGATTGGCTCATTTCTTTTAAGCGCAGGCATAACCTTACAACTCGAAGGCCCGAACCATGCAGTCTCGCCAGAGCtacaagttttaataaaaaaaaagtggagtttttttttgaaaacttGGAGAATTTGATCAAGAGCAATCCTGTTTTTGCAGATGGGACTAGAATTTTCAACCTCGATGAGACATCAACATCCACGGACCTCCACGGACCCGAAGGACGTAAATGCATAGGAAAAGTCACAAGCGGCGAAAGAGGGACATTGGTCACGACTTGTTGCATTATTTCAGCGAGCGGCTACGCCTTACCGCCTGTGATGGTTTTTCCCAGGAAAAATTTCAAGGAACCTATGATCAAAAATACGCCACCTGGTACTCTGGGACTAGCTACGCTGACAGGTTGCATGAATAGTACTATCTTCCCGGCTGTCATGAAACATTTTATAAAGCACGTGAATGCATCCAATGATAACCCATGCATCCTTATAATGGATAACCATGAATCTCATCTATGTTTAGAAGCGTTGAATTTGGCTAAGGACGCGGGCGTTCATGTTCTTATTTTGCATCCTCATACTTCAGCCAAGCTACAGCCTTTGGATGTGGGGGTATATGCCCCCTTTAAGGTATACTACAACGCAGCTATTGACTCTTGGCTTATGAAACACCCGGGCAAGCCTATTACCATATACGACTTGGGTGAAGTCATAGGTATAGCTTTCCAGAAAGCTATGACACCCTCAAATATTACGAAATCGTTTGCTGAATGTGGAATACATCCATTTAGGAGACTAATATTTACAGATGATGACTTTCTCCCGAGTTCTGTAATCGACCAGCCTTGTGCAGAATGCGCCTCGCGAGAAAAAGGTCTTGCTTATACTATTCCGATTGGATTCAGCCAAAAGAGAAATAAACCAGAAACTGATGAAAATTTAACGAATTTACGTGAAATAGTAGCCACTACAAAGAATGCAGCATCATTATTATCGAGTTCATGTTCACACGAGTCCACAGCAACAAAATCTGATAACGATATGAATAAGgtatatttaacaaatttaaatgaagCTACCATAGCTGCAAATATCACACCAGCAAACCTTCAAGTTCAGGCGTATCAAGTAATGTTACGGTTGTTATCCAAAAGTTCTACGGACTTTACGCAAGTTGTTGCTACCAACACTACCAGTTTTGAAATACTTCAACCATTACATCAGAAATCTCAAGCATCTGAAAATGAAGTACCGGCCTATACCTGGTACAGAATGATTCCACGTGCCAGATAA
Protein Sequence
MVDIDKTCRTCMKRDVVLVDLFGPLKIENYCSLKLADILMETIPLQVSNEDGLPQNLCDECVKTLQLMFAFRNQALHSESELKKLIVLNNKIKNEDVDYHLETDFDLFGCEDLSSDDVQSLPDTENKVKIYNCVTCDKKYTDYEKYLRHKSGHDDPSKSHQKCGKKSHRNSLLKVCEIKHCETDDIVNVQSDAKPEDIQVEIKLENDEHKCSECSLLFQSRNQLLSHLKEHDSSKSTDQNVITSIQQHNVLDKIAFTQLCALKDHIRTHTGETPYLCSECGKGFKNSSNLRQHLARHSGLKPFSCNLCSKTFCTKGQVNSHMLSHTGVQPYKCNECGSSFTKSTSLKKHKLIHLGLKPFACDSCDMRKRRKIGNNTENDIRRGIVLIRSGMSIRQAAKNVEVPFTTLKRYYWKTKNDVSLEEQLLQPNYSVNKVFTATQEEELKDYINHCALLFYGMTSKECRQLAYQCATIKKIKVPDSWKKNGMAGKDWLISFKRRHNLTTRRPEPCSLARATSFNKKKVEFFFENLENLIKSNPVFADGTRIFNLDETSTSTDLHGPEGRKCIGKVTSGERGTLVTTCCIISASGYALPPVMVFPRKNFKEPMIKNTPPGTLGLATLTGCMNSTIFPAVMKHFIKHVNASNDNPCILIMDNHESHLCLEALNLAKDAGVHVLILHPHTSAKLQPLDVGVYAPFKVYYNAAIDSWLMKHPGKPITIYDLGEVIGIAFQKAMTPSNITKSFAECGIHPFRRLIFTDDDFLPSSVIDQPCAECASREKGLAYTIPIGFSQKRNKPETDENLTNLREIVATTKNAASLLSSSCSHESTATKSDNDMNKVYLTNLNEATIAANITPANLQVQAYQVMLRLLSKSSTDFTQVVATNTTSFEILQPLHQKSQASENEVPAYTWYRMIPRAR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00986697;
90% Identity
iTF_00986697;
80% Identity
iTF_00986697;