Math024992.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992192.1:3971053-3971974[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-09 3.9e-06 27.8 0.0 2 36 16 50 15 57 0.89
Sequence Information
- Coding Sequence
- ATGCCGAAGGTTAAGGAAGGAAAGATATATTCGAAGGGGTATTCAGAATCGGAGCTGGATAAAGCTTTGGAAGCTATAAAAAATGGCATGGGAAAATTGACTGCTgcgaaaaaatttaatattccaCGCGCAACTTTGCAGTTTCGGTTGTCCAAAGAATTCGTCAAAAGTCGACCTGGTCCTGACACAGTTTTATCCAGCCAGGAAGAAAATCAGCTGGTCCAATGGATAATTGAATCTTGTCGAAAAGGTTTCCCGCGGCGTAAAGAGGATGTCATACAAAGtgtgaaattatttttgattgcGAATCCTCGATCGAACAGCTTTATAGAAAACACTCCAGGTGAGGGATGGTATaagttgtttttaaaaaggcACCCTGAGGTTGCTTTAAGAACATCTGAAGCTGTAACTTCCGCTAGTTCAAAAGTCTCAGAAAGCAATATTCGAAGCTGGTTCACACAGatagaaaattatttgaaagaaaataatCTTTTTCATATTCTTAGCGACCCGTCTAGAGTATACAATGGAGACGAAACTAACTTTATTTTGTGtccaaaaaatacaaaagtaatAGCTCCAAAGGgggaaaaaaatgtttatgaggTAGACCATGCCCCATCAAAGTCCTGCATCACGGTCATGTTTACCTTTGGAGCTGATGGTGATACAACACTACCTATGATTATTTTTCCGCTGAAAAGGATGCGACCAGAGATTCGAAAGTCTGTGCCTAAAGAGTGGGGTATTGGATTGTCAGACAATGGGTGGATGAAAGCAGAGATGGCCATAAAAGCCACACTACTCTTGAGCTGTCACAACTTTGCCAAAGCCTAG
- Protein Sequence
- MPKVKEGKIYSKGYSESELDKALEAIKNGMGKLTAAKKFNIPRATLQFRLSKEFVKSRPGPDTVLSSQEENQLVQWIIESCRKGFPRRKEDVIQSVKLFLIANPRSNSFIENTPGEGWYKLFLKRHPEVALRTSEAVTSASSKVSESNIRSWFTQIENYLKENNLFHILSDPSRVYNGDETNFILCPKNTKVIAPKGEKNVYEVDHAPSKSCITVMFTFGADGDTTLPMIIFPLKRMRPEIRKSVPKEWGIGLSDNGWMKAEMAIKATLLLSCHNFAKA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985962;
- 90% Identity
- iTF_00985962;
- 80% Identity
- -