Math032406.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- clz9
- Assembly
- GCA_905220545.1
- Location
- HG992198.1:1072038-1084475[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.01 4.3 8.5 0.0 2 20 120 138 119 138 0.94 2 2 6.1e-08 2.5e-05 25.2 0.0 2 41 371 409 370 412 0.91
Sequence Information
- Coding Sequence
- ATGACGACGAACTATCTTGACAGCGTGCCTAAATTGAAAGGACGAGAGAATTACGGTGAGTGGGCTTTCGCGGCTGAGAATTTCCTAGTTCTTGAGGGAATGTCTGATTGCATTAAGTCGGAGACTATACCATCAGAAATAGGAGCAGCAGACATGGAAGAAAGCGGAAACGGCGGCGACAACAGCGCCTTCACTTCCAGTGGCGCGTTTGCGAGTTATAAGAAGAATCGAAATGTTGGTAACACTGCGAACAAAGACAACGCCCAGATGTCAAAATCTAAACCAAAAGTTATTACGTGCtataaattTACAAAGGTACGGAATTATAAACGAAAAACGGATCGTGGAGCATGGGAAGAAGATGACATGAGAAGAGCTGTTAGAGCTGTGCTGTCTGAGACCATGGGACAACGACTATGGGAAAAAAAATTAGGACGCTATAAAACAGTTTTTACTAAAGAACAAGAAGAAGAATTATCTCAGTACGTTAAATCAATGGAAGCGCGCCTTTTTGGAATAACTGGCAAAGAGCTTCGGATTTTAGCTTTCCAGTTAGCTGAGAGAAACCATATTAAGAACCCATTTAATACAGAGACTGGAATGGCAGGAGAAGACTGGCTCAGTGAATTCCTAAAAAGGCATCCTGAACTTTCATTTAGACGCCCAGAGCCAACTTCTGCTGCAAGGGCTATGGCTTTTAACAAAGTGGCAGTTAGTGAGTTTTTCACACTATTGGAAAGAGTTGTAGAAGAGCATGGCCATACCGCTGACAGGATTTACAACGTCGACGAGACCGCTGTTAGTACTGTGACAAAAAGTCAATCAAAGATATTATCACTTAAGGGACAAAAGCAAGTTGGCTGCTTGTCATCTGCAGAAAGGGGGCAATTAGTTACTGCAGAAATCTGTTTTAACGCCGCCGGAACATACATCCCACCAATGCTGATCTACGCCAGAAAACGAATGAAGAATGAGTTGCTGGATGATGCACCACCGGGATTTTGGGGGACATGTAGTGATAATGGATGGATAACTTCACAATTATTCTATGAGTGGTTCAAAAAGATACCAAGAACAAAAAATAAGGAACGGAAAATAGGAAAACACACAAAAGAGGATATGATGTCAGCTTTACAAATGGTACAAAATGGTAGCTCCATTAGGACGGCGGCAAAAACCTGTAAAATCCCGTACCCTACCTTGCGCCGTTACGTGAAAAACAAAAGTGAACATGGTGATAATATATCACTTGTACCTAGGTACGATATTAATAGAGTGTTTACTGAAGAACAtgaacaaatattattaaaatactacaagGACTGTGCACTAATGTTCTACGGTTTAACCGTTAAAGAATGTAGGAAGGTGTCTTATGAAATGGCAATGCGTAATGGCATCAAAATACCAAGCTCATGGAAAAGAGATCAATTGGCAGGCTTAGAATGGTTTCGTTTCTTCAAAAAAAGACATCCTGATATTTCGGTGAAAAAACCAGAAGCTGTTAGTCTCGCACGAGCTACCTCATTTAACCGTGAAACTGTggcaatattttttaataatttggaAGAGTTGCTGAAACGAGAGCCTAGATTCACGGATGGAACTCGCATATTCAATCTTGATGAAACCGGCACAACCACTGTCCAGAAACCTCAGAAAGTTGTGGCTCCAGCAGGAGCTAAAGTAGGTAAAGTCACAAGTGGAGAAAAGGGCACTCTTGTCACTACATGCTGTATGGTTAGTGCTACAGGCCACGCCCTGCCCCCGGATATAATATTTCCTCGgaaaaactttaaaaacttgATGATGCACGGTGCACCTCCAGGTAGTTTAGGGCTCGCGAACCCATCGGGTTGGATGACTAGTGAATTATTCGTGAAAGTGATGAAACATTTCATTAAGTGTTCAAGCACGACACCAGAAAATCCATGTCTGCTAATAATGGATAATCATGAGTCACATTTGTCCATCGAGGCTTTAGATTTGGCGAAACAATCTGGTGTTGTGATTCTTACGTTTCATCCTCACACTACTCACAAACTGCAACCCTTAGATGTGGGTTTGATAGGCTCTTTAAAGACCTATTATTATTCTGCACTTGAGTCATGGATGCTACAGAACCCAGGTAAACCAGTTACAATATACGAGATAGCAAGATTTATTGGTCATGCTTATCCCAGATCTATGACACCACTAAACATATCGGCAGCTTTTGCAAAATGTGGAATTTTTCCCTTTAATAAGGATATATTCTCGGATGAAGACTTCATGCCAAGTAGCGTGACAGACCGCCCCGTTCCAGTGGTGTCACAAACATCGCCTGATGCTGAACTCAATATGAATAGAAGCAAAAATCAACAGGACTCGACTTATCTAGAGACACGTTGTTCAAGTTATGATCCTGTTGTAGCCCCTGATCGAGAAAGTCCATCAATACTATCACAAGAACATATTTATTACCAAAACGTGACACCACCAAAGAAACCAGATGAAGCATGCAATAGTGAAAATCATCCACCAAAGTCTGAGCATATCATCACTCCAGTAATGTTCCGTCCACCGCTAAAGGTCGGCCCACGTACCGACAAACGGAAAGGTAGAAAACTAGGCAAAAGCATGATAGCAACAGACACACCAGAAAAGGAAAGAATAGCTGAGGAACGTACTGCTGCAATAAAAAGAAAAGGTCAGCATAAAAGGAAAGTTCTACAAGATTGTGGAAATGAAATGCttccatcgacaagtaaaattagaaaaataccAAATAAGAGGAACAATAAAAGAAGAGTTGTACTAGACGAAGACAGTGAAACGAGTGAAGCAGAAGATATAATTCTTGAAAGTGAAACAGACCTAGAATCGGATGAGGAAGATGAGCAAATTATAGATGAAGATTTTCCTGATTTACAGCGTAAGCCAATGATTGACGAATATGTCATTGTATTGCTGCAATCTAAAAACCGGGTTGTTCATTATATTGCGAAGATTGTGGAAGATTGTGGTGATGATGAATATGGCGTTTCGTACCTGAAGTTAAAAGATCGTCTTAATAAAACGTTTGTGTTTCCATTAGAACCTGATTTGGCAACTGTGACACTGAGTGACATTAAAATGATTCTTCCTCCTCCTTGTGTGTCTGATGGAAATTCAACAGGTCTGTCAGAATCTACAACAGTTGCTTGCCTGGAAGAAGTTTTGGGCGTGGACGTGGCTGACAATGACAACACCGAACTTAATGAATCTGCGTCTATTTTACAAGAAATACCGCAGAATACATCTATAGATATCAACCCACGTCGAGCGCCTTCGTCTTCACCCTCGTTGCCAGCCATCACAAGACAAACACGCAAAAGAAAAGATACTGGCTTAGAAGCATTCCTCGATATATAG
- Protein Sequence
- MTTNYLDSVPKLKGRENYGEWAFAAENFLVLEGMSDCIKSETIPSEIGAADMEESGNGGDNSAFTSSGAFASYKKNRNVGNTANKDNAQMSKSKPKVITCYKFTKVRNYKRKTDRGAWEEDDMRRAVRAVLSETMGQRLWEKKLGRYKTVFTKEQEEELSQYVKSMEARLFGITGKELRILAFQLAERNHIKNPFNTETGMAGEDWLSEFLKRHPELSFRRPEPTSAARAMAFNKVAVSEFFTLLERVVEEHGHTADRIYNVDETAVSTVTKSQSKILSLKGQKQVGCLSSAERGQLVTAEICFNAAGTYIPPMLIYARKRMKNELLDDAPPGFWGTCSDNGWITSQLFYEWFKKIPRTKNKERKIGKHTKEDMMSALQMVQNGSSIRTAAKTCKIPYPTLRRYVKNKSEHGDNISLVPRYDINRVFTEEHEQILLKYYKDCALMFYGLTVKECRKVSYEMAMRNGIKIPSSWKRDQLAGLEWFRFFKKRHPDISVKKPEAVSLARATSFNRETVAIFFNNLEELLKREPRFTDGTRIFNLDETGTTTVQKPQKVVAPAGAKVGKVTSGEKGTLVTTCCMVSATGHALPPDIIFPRKNFKNLMMHGAPPGSLGLANPSGWMTSELFVKVMKHFIKCSSTTPENPCLLIMDNHESHLSIEALDLAKQSGVVILTFHPHTTHKLQPLDVGLIGSLKTYYYSALESWMLQNPGKPVTIYEIARFIGHAYPRSMTPLNISAAFAKCGIFPFNKDIFSDEDFMPSSVTDRPVPVVSQTSPDAELNMNRSKNQQDSTYLETRCSSYDPVVAPDRESPSILSQEHIYYQNVTPPKKPDEACNSENHPPKSEHIITPVMFRPPLKVGPRTDKRKGRKLGKSMIATDTPEKERIAEERTAAIKRKGQHKRKVLQDCGNEMLPSTSKIRKIPNKRNNKRRVVLDEDSETSEAEDIILESETDLESDEEDEQIIDEDFPDLQRKPMIDEYVIVLLQSKNRVVHYIAKIVEDCGDDEYGVSYLKLKDRLNKTFVFPLEPDLATVTLSDIKMILPPPCVSDGNSTGLSESTTVACLEEVLGVDVADNDNTELNESASILQEIPQNTSIDINPRRAPSSSPSLPAITRQTRKRKDTGLEAFLDI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -