Math031128.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- clz9
- Assembly
- GCA_905220545.1
- Location
- HG992196.1:18112537-18115350[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-11 1e-08 36.1 0.2 2 41 15 54 14 57 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGTCACTACAAGCGAAAAACTAATGACTCATATTCTCAAGAGTCACTACAAAAAGCTGTTGAAATGGTCAAAGCAAAAGAAATGACCACATACAAGGCTGCTGCAATATTTGGTGTACCTCGATCAACTATTCTAGCCCGAGTAAAGGGAAAACGTGGTGCGAAATATGAACATCGTGGTAGACCAACTACATTCACGGCgtctattgaaaaaaatatagccgCAGTTCTACATACTATGGAGCAGTGTGGTTTTGGTTTGACTAAAAGAGAAGTTATTGGACTAGTAGGCCAATATGTGACTCGGAACAACATCACCACTACTTTCAAAAATAGTTTACCTGGAGACGATTGGTTTGTTAGGTTTACTAGAAGAAATAAGCTTTCTCTTAAAAAGCCACGAGCAGTCGAAATTGCTCGCAAAAAAGCTGCAAATCCCTTTGAAGTACAAGAATTTTTCGATTTGTTGGAAAAAACTATATCTGAAATTGATGTACGACCAAGTCGTGTATACAATCTCGACGAAACGAGTTTCAATCTCGATCCTTCAAAAAGTAAAATTGTAGGAGTTCAGGGGTATTCGTGCACAAGAACAACAAGTACACCTGGGCGTGAAAATATTACCGTGCTATTAGGAGCTAATGCATGTGGTGAGAAAATTCCacctttaattatatttaaaggtACCTATCTCTGGAATACTTGGCTGTATGAAAACGATAATAATACCACGTATGCAGCCACGCGTAAAGGTTGGATGGAAACACCTGTTTTTGAAAGCTATTTTGATAACGTCATCATCCCGACACTGTGTACGAAAAAAGAGCCCTTGCTTATAATTTATGATGGACACTCAACACACTTGGacataaatattattgaaaaagcTGCAGCTAACAATATAACGATAATCAAGCTACCACCTCATACGTCACACATTTTACAACCACTCGATATCAGTACGATGAAATCTATGAAAGACCGATGGGACAAATATTTGGTGCAATGGCAAAGAAagaatattggcaaaaaactgCCTAAAAGCGAATTCTCACGTATTATGACGGAAGTGTGGAATGAACTAGAGCCTGACATTATAATTAACGGATTTCGCAAAGCAGGAATATGGCCAATGGATCGCCACCAAGTTTCGCAAGACAAATATGATCAATTAGCTTTGAAAAGATGGGAAAATCAGAAGAAATCCAATGAAAATACTAATGAACATGTAAGCCTAAGTAAAAATAATGAAggagaaaaaacaaaagaagATTTAATATACCAGAAAGAAAATATAATCATGGAAAATGAAAGTGAAGAAAGTAAAGAGAACTTACATGATAAGGAAACAGAGgaaaaaaatgcaaataattgtgCGATTGTGAAGAATCCTGGAatgtttaaattacatttgCCACAAAAAATTTCAAACGAAAACCACTATAcagaaaaaattgtaattttaaaagatgaaataataaaaacaccAAATTCACAAAATTCAATCACAGCCGAGCCAACTCGTCCTATGGCTAACCACTATAAAACCAATGAAACCAAAGAACATATTATTAATACTACTGTTACTTTTGAAGAACTGGTATTGCAGACTATTTCTCGAGGAGACCAAAATACacctaaaaaaaagaaaagaatcgGGAGAGGTGCAGAAGTAATTACTCATAAAGAAGCTATTGCTagaataaaaaaggaaaaagagACGAAACTTGCAAAATCCGTTAATAAGAAAAAGACCACCACTGCCACAACAAATATAAGAAAAAGGAGtacaaaaaacaaagaaaataaaaaatctaagaaAAGGACAAAGAAAATAGATAAGGATGAAACAAGTAACAGTGATATAGAAATGAGTATGCACAGCGATTCGGATCTTTTGGATTTGCAATCTGATATTGAAAATGAAGCAATTATAATGGAATGTATAGAAGATAGAGAACTTGAAGAAAGCCAGATAGTGACAAATATGATAGGTCAAATAGATCTTGAGAAATTTGAAAGTAGCCCAAAGATTGGTGGCCAAAGAAATAAGAAAATGATGGTTAATAATATTGATGACGAACAATGTGTGAGAGGTCAGGGCATGAAAGAAAACAATGcggaaattttaataaatatacagcCCAAGGAAGTTTTAGGAGATCAAGACATACAAGATAGGTATGATGAAGCTAACGGTGGTATAGATGAGATTAAAGAAAGCTGCTTTATTGAGGTaaagaatgaaaaaaaatcaggAAGAAAGTATATCAAACaggttaaaaataatgaaaaaccaAGAACTATTAAGGTATCCATGTTATCAGAAGTAAGAGACACAGCAGATAACCATCCATTTTTGTTCCTCAACAAATACGATCCCACTAGATCAACAGAAAAATACACTCATTCAGTGCTTAGGGATCAGAATTTTAATACACCCaatcaaaaaatacaaaactcTATTTTGGATGATTATTTTGCAGCAGGTTGTAGTAAAGAGCCAGAAAAAAACACCTGTGTTTCATATAGTATAAATGACTGTATTATAGTAAGATACATATTTAAGAAGAAAGTCAAATATTTTGTGGGAAAAATAATCTCTAAACAAGGAAACAAATATGAAGTATCCTTTTATGTCCAACACAGAAAGAATGACAGCACAATATTTAggaaaccaaaaaaaattgatattgaTACCATAGATGAAGAGATGATTGTGAAACCAGTTCAATTAATAGCTTTGAATCAGCAAGAATTAGATTTTGCTTTCTTTGACGATGATGATTTGGTGTATTTTGATTGTTAG
- Protein Sequence
- MVRHYKRKTNDSYSQESLQKAVEMVKAKEMTTYKAAAIFGVPRSTILARVKGKRGAKYEHRGRPTTFTASIEKNIAAVLHTMEQCGFGLTKREVIGLVGQYVTRNNITTTFKNSLPGDDWFVRFTRRNKLSLKKPRAVEIARKKAANPFEVQEFFDLLEKTISEIDVRPSRVYNLDETSFNLDPSKSKIVGVQGYSCTRTTSTPGRENITVLLGANACGEKIPPLIIFKGTYLWNTWLYENDNNTTYAATRKGWMETPVFESYFDNVIIPTLCTKKEPLLIIYDGHSTHLDINIIEKAAANNITIIKLPPHTSHILQPLDISTMKSMKDRWDKYLVQWQRKNIGKKLPKSEFSRIMTEVWNELEPDIIINGFRKAGIWPMDRHQVSQDKYDQLALKRWENQKKSNENTNEHVSLSKNNEGEKTKEDLIYQKENIIMENESEESKENLHDKETEEKNANNCAIVKNPGMFKLHLPQKISNENHYTEKIVILKDEIIKTPNSQNSITAEPTRPMANHYKTNETKEHIINTTVTFEELVLQTISRGDQNTPKKKKRIGRGAEVITHKEAIARIKKEKETKLAKSVNKKKTTTATTNIRKRSTKNKENKKSKKRTKKIDKDETSNSDIEMSMHSDSDLLDLQSDIENEAIIMECIEDRELEESQIVTNMIGQIDLEKFESSPKIGGQRNKKMMVNNIDDEQCVRGQGMKENNAEILINIQPKEVLGDQDIQDRYDEANGGIDEIKESCFIEVKNEKKSGRKYIKQVKNNEKPRTIKVSMLSEVRDTADNHPFLFLNKYDPTRSTEKYTHSVLRDQNFNTPNQKIQNSILDDYFAAGCSKEPEKNTCVSYSINDCIIVRYIFKKKVKYFVGKIISKQGNKYEVSFYVQHRKNDSTIFRKPKKIDIDTIDEEMIVKPVQLIALNQQELDFAFFDDDDLVYFDC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984962;
- 90% Identity
- iTF_00985926; iTF_00984962; iTF_00984965; iTF_00984966; iTF_00984967; iTF_00984968;
- 80% Identity
- -