Math002405.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- JARID2
- Assembly
- GCA_905220545.1
- Location
- HG992176.1:12717391-12731225[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-16 1.3e-12 49.2 0.1 6 89 109 195 106 195 0.88
Sequence Information
- Coding Sequence
- ATGAATTTTCATACTTACATCGAGTCAGTACAAGGTCAGTTTACATTCTTTGAAAGACACACAGACGGACAAAATGATTCGGGGAAACAAAGGAAATTGCGGATGCTTTCTACTAGGGGCTACCGGGCGGGTATAAAAATATGCCAGGACCCTGTCGCATATTTCCAAAAAATAACACCAGAAGCAGCTAAATATGGTCTATGCAAAGTGATAGCACCTCCAGGCTTCAAACCTCCCTGTACACTTACTGACTCTATCCGATTCGCTGTGACGAACCAGTATTTGTCGCGATTCTACAGTCGATGGGGACCAGTGACGCGAGAATTATGCGCCTTGCGATCATTTTTAGCGTCGCAAAACATAACCTTCTCTCATTCGCCTTTACTCGAAGGCTTGGAAGTAAATCTGCCGAAGATGTTGCATTTCGTTCAACGTCAAGGGGGGCTTAAAGCGAATGTCAAAAGTAGAACGTACGTAGACACGAGAAAATGGAACAAATTAGCCGAGGAACTCAATTATACAAAGTTAAATAATCCGGCTAAAAAATTGGAccaaatatatgtaaaatatctGTTACCCTATGATGCCCTTACTCAAAgagAGCGTCAAGAACTAACAGAGAAAATGGACAGGAACTGGTCGAAAAGAAACGATAAGCTGATACTACGAGCACAGAACCCGCTTCACCGTCAGAAGAGGTTGTTAGGCGAATCCGACTCTTCAGATGACGATGACGAAGATAATCAGCACATGACTGCAGCGCTCAACGAGGCTGAGGAATGCGTTGTGCGGGGACGCGTCATGAACCTCGCCAACTTTAAGAAGatagCCACCACCGCTCAGAAAATATTTTTCCCATCAACACCTTCGACGTCCGAAATTGAATCTCAATACTGGAAACTTGTTCTCCTGGGCAATGAACATGTGTGCGTTAACACTGCCTCAATAGACACGGGTGTTGAGGGCTACGGCTTCAGTAAGAACACGAATGAACAATACGGCACACACCCATGGAATTTGAAGATGCTAAGCCAGAACAGCGGCAATGTGCTGCGTTCTCTCGGGCCCGTGCTGGGTGTGACGGTACCAACGCTGCACGTGGGTATGATATACTCGACTAGCTGTTGGCACCGCGACCCACACGGCCTGCCCTGGATTGAATATATGCATACAGGCCCAGAGAAGATTTGGTACGGCATACCAGATTCTGAAAGTAACAAATTCCGCCGTGCAGTTGAGAGCCTATGCCCAACGGCTTGTCAAAACAAATCTATATGGCTCCCATCGGACATAGCTATGATACCGCCCAATTTGCTTCTAGAGAGAAATGTCTCTATGTCACGAATGGTTCAGAAGCCTGGAGAATATATAATTGTATTCCCTAAAGCTTACTCTTGTTCGATATGTACGGGATACACTGTCTCAGAGAGTGTTTACTTCGCAACCAACTCTTGGATTAAAAGTGTTAACTATGTCTTTCAAGAACTACGTCAGAGCTGCGAGCCAACAATGTTTTCCCTGGAGCAGCTGTTGATTTCTGTGGCTCGCGACCCGAACGCGTCACTCACCATGCTACAGTTGGTACACGAGAGCTTCTCCGCTATACTCTCAGAGGAAATAGAAAATCGGCGCCAGCTCGAGGGGCGTGGACTCAAGGTATCTATCCTGTAG
- Protein Sequence
- MNFHTYIESVQGQFTFFERHTDGQNDSGKQRKLRMLSTRGYRAGIKICQDPVAYFQKITPEAAKYGLCKVIAPPGFKPPCTLTDSIRFAVTNQYLSRFYSRWGPVTRELCALRSFLASQNITFSHSPLLEGLEVNLPKMLHFVQRQGGLKANVKSRTYVDTRKWNKLAEELNYTKLNNPAKKLDQIYVKYLLPYDALTQRERQELTEKMDRNWSKRNDKLILRAQNPLHRQKRLLGESDSSDDDDEDNQHMTAALNEAEECVVRGRVMNLANFKKIATTAQKIFFPSTPSTSEIESQYWKLVLLGNEHVCVNTASIDTGVEGYGFSKNTNEQYGTHPWNLKMLSQNSGNVLRSLGPVLGVTVPTLHVGMIYSTSCWHRDPHGLPWIEYMHTGPEKIWYGIPDSESNKFRRAVESLCPTACQNKSIWLPSDIAMIPPNLLLERNVSMSRMVQKPGEYIIVFPKAYSCSICTGYTVSESVYFATNSWIKSVNYVFQELRQSCEPTMFSLEQLLISVARDPNASLTMLQLVHESFSAILSEEIENRRQLEGRGLKVSIL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -