Mcix014616.1
Basic Information
- Insect
- Melitaea cinxia
- Gene Symbol
- GATA-B
- Assembly
- GCA_905220565.1
- Location
- HG992211.1:158750-160805[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3 1.9e+04 -3.9 1.1 21 26 37 42 33 44 0.81 2 3 1.4e-17 6.3e-14 52.1 3.8 1 34 56 88 56 90 0.97 3 3 6.8e-19 3e-15 56.3 7.6 1 34 124 156 124 158 0.97
Sequence Information
- Coding Sequence
- ATGTTATGCTCAAATTATTTAGTATTGCGCTCGCTAAGTGAGAATGTAACGTATGTGCTCAGTATAAGTGGGACGCTCGGGCGGCGAATGGCGAGGCGGCGTGTGCTAATGGTGTGTTGCGCATGCGCAGTCGAGACGGCGGAGTTTTTCACGGAGGGTCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGGCACTACCTGTGCAACGCGTGCGGCCTGTACACCAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCCCGGCGGCTGGTACGTCAGCGGCACGCGGCGCACGCGCTGGCGCCCGCCCCCGACATGGGCACGAAGCGGCCGGGCATGGCGTGCACCAACTGCCACACCACCACCACGTCGCTGTGGCGCCGCAACGCGCAGGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGACTAGAAAGCGGAAACCGAAGAACAGTATGAAAGCAGAGAGGAGTATCAGCAAAGGCCTCATGAACGCGGCGCACGCGGCGCACGCCGCGCACAATACGCACTCGGTCGCGTCCGCCGTGAAGATCGAGAACCTTCTCGAAGGAGGCTCGGGTGTCGGAGGTGCGAACGGCGCGGGTTCGGGAGCGCGCTCGCCGCTCACGCTCGGTTTCTACGTGCAGCAGCACGCGACCGTGAAGCTGGAGGAGCCCCCGCCGGCGCACGCGCACCACGCGCACCAAGCCCACCAGGCGCACCAAACACACCAGGCGCACCAGCCGCACCAGGCGCACCACGCGCACCACTCGCAGCCCTTCTACGAGGACGAGTACCGGCGCGCCGAGCCGCAGGAGCGCCTCGAGCGCGCCACCGTCGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MLCSNYLVLRSLSENVTYVLSISGTLGRRMARRRVLMVCCACAVETAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYTKMNGMNRPLKQPRRLVRQRHAAHALAPAPDMGTKRPGMACTNCHTTTTSLWRRNAQGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKAERSISKGLMNAAHAAHAAHNTHSVASAVKIENLLEGGSGVGGANGAGSGARSPLTLGFYVQQHATVKLEEPPPAHAHHAHQAHQAHQTHQAHQPHQAHHAHHSQPFYEDEYRRAEPQERLERATVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -