Mcix017341.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melitaea cinxia
Gene Symbol
-
Assembly
GCA_905220565.1
Location
HG992234.1:4219507-4249897[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 1.4 1.4e+02 4.0 0.7 1 23 330 352 330 352 0.97
2 47 0.00092 0.098 13.9 7.0 1 23 359 381 359 382 0.95
3 47 3.9 4.1e+02 2.5 2.3 1 23 386 408 386 408 0.97
4 47 0.14 15 7.0 1.8 1 23 413 436 413 436 0.97
5 47 0.016 1.7 10.0 0.4 1 23 440 463 440 463 0.93
6 47 0.036 3.9 8.9 0.5 3 21 477 495 476 500 0.93
7 47 3.3 3.6e+02 2.7 0.4 2 23 551 573 550 573 0.94
8 47 0.021 2.2 9.7 1.1 2 20 589 607 588 610 0.89
9 47 0.0014 0.15 13.4 0.4 1 23 616 638 616 638 0.97
10 47 9.8e-05 0.01 17.0 0.8 1 20 644 663 644 669 0.93
11 47 9.8e-05 0.01 17.0 0.8 1 20 677 696 677 702 0.93
12 47 9.8e-05 0.01 17.0 0.8 1 20 710 729 710 735 0.93
13 47 9.8e-05 0.01 17.0 0.8 1 20 743 762 743 768 0.93
14 47 9.8e-05 0.01 17.0 0.8 1 20 776 795 776 801 0.93
15 47 9.8e-05 0.01 17.0 0.8 1 20 809 828 809 834 0.93
16 47 9.8e-05 0.01 17.0 0.8 1 20 842 861 842 867 0.93
17 47 9.8e-05 0.01 17.0 0.8 1 20 875 894 875 900 0.93
18 47 9.8e-05 0.01 17.0 0.8 1 20 908 927 908 933 0.93
19 47 9.8e-05 0.01 17.0 0.8 1 20 941 960 941 966 0.93
20 47 9.8e-05 0.01 17.0 0.8 1 20 974 993 974 999 0.93
21 47 9.8e-05 0.01 17.0 0.8 1 20 1007 1026 1007 1032 0.93
22 47 9.8e-05 0.01 17.0 0.8 1 20 1040 1059 1040 1065 0.93
23 47 9.8e-05 0.01 17.0 0.8 1 20 1073 1092 1073 1098 0.93
24 47 9.8e-05 0.01 17.0 0.8 1 20 1106 1125 1106 1131 0.93
25 47 9.8e-05 0.01 17.0 0.8 1 20 1139 1158 1139 1164 0.93
26 47 9.8e-05 0.01 17.0 0.8 1 20 1172 1191 1172 1197 0.93
27 47 9.8e-05 0.01 17.0 0.8 1 20 1205 1224 1205 1230 0.93
28 47 9.8e-05 0.01 17.0 0.8 1 20 1238 1257 1238 1263 0.93
29 47 9.8e-05 0.01 17.0 0.8 1 20 1271 1290 1271 1296 0.93
30 47 9.8e-05 0.01 17.0 0.8 1 20 1304 1323 1304 1329 0.93
31 47 9.8e-05 0.01 17.0 0.8 1 20 1337 1356 1337 1362 0.93
32 47 9.8e-05 0.01 17.0 0.8 1 20 1370 1389 1370 1395 0.93
33 47 9.8e-05 0.01 17.0 0.8 1 20 1403 1422 1403 1428 0.93
34 47 9.8e-05 0.01 17.0 0.8 1 20 1436 1455 1436 1461 0.93
35 47 9.8e-05 0.01 17.0 0.8 1 20 1469 1488 1469 1494 0.93
36 47 9.8e-05 0.01 17.0 0.8 1 20 1502 1521 1502 1527 0.93
37 47 9.8e-05 0.01 17.0 0.8 1 20 1535 1554 1535 1560 0.93
38 47 9.8e-05 0.01 17.0 0.8 1 20 1568 1587 1568 1593 0.93
39 47 9.8e-05 0.01 17.0 0.8 1 20 1601 1620 1601 1626 0.93
40 47 9.8e-05 0.01 17.0 0.8 1 20 1634 1653 1634 1659 0.93
41 47 9.8e-05 0.01 17.0 0.8 1 20 1667 1686 1667 1692 0.93
42 47 9.8e-05 0.01 17.0 0.8 1 20 1700 1719 1700 1725 0.93
43 47 9.8e-05 0.01 17.0 0.8 1 20 1733 1752 1733 1758 0.93
44 47 9.8e-05 0.01 17.0 0.8 1 20 1766 1785 1766 1791 0.93
45 47 9.8e-05 0.01 17.0 0.8 1 20 1799 1818 1799 1824 0.93
46 47 2.3e-05 0.0024 19.0 1.5 1 23 1832 1854 1832 1854 0.97
47 47 0.00012 0.013 16.7 4.1 1 23 1860 1883 1860 1883 0.95

Sequence Information

Coding Sequence
ATGGTTTTCTTTTCAATTTTTGAGGACGAAAGCTTCCCATTGGAACCAAACCTCCGTGCCTCGTGGTTGAAAGCGGTTGGAAAGGACTCGTGGTCGCCGCGAGACAGGAGCACTGTCTGTTCAGAACATTTCTCACCAAGTGATTTATATGAGACTAAGAGTGGTCTAAAAAAGGTTAAGACTGGTGCCGTTCCTATACGTACGCAGGATACTTCAATCGATTGTGGTGAATCGGTCAGTTCGAAGGTATGCAGAATATGTCTAGCCGTGGATTTACATCTACACCCCATGAGTATGTGTAAATTGGAAAAAGCCTATGAAAACCTAACTGGAATCACGTTATCTAATGAAGATGAGTTACCACAGAAGCTGTGCACAGAATGTGCTAGAAGGTTACTGAATAGTGATAAATTACGGAGCAGAAGTCTAAGGGCCAATTCGTTGCTGCAAGAAATAGTTAAGAAGCAGAAGATTATAACAGTACAGAGTATCGCTGCAATCAATCGTGAAGACAACCATCTAGCTTCGGTTTTGACTAAAAAGTTATTTGAACCCGAGCACTATGATTCTTACATAGAATATAATGAAGCACAAGACGAACAAACGGACAAAACTCCGATACAGGAAATAGAAGATATTAAAAGCGAGAAGAATGAAGAAATATTCATTAATGAAATATACACCGAGAGTAATAATGATATAATTAATGAAAATAATGATAATGATTTCGTTGTAACAAATTACTCGTCAGACGATAGTTTACCTCTAGAAACTCAGAGGAAGAAAGTCAAAAAGATGAAGACGAAGGAAAAGAAGAGAAAAAAGGTTGAAAAGATTCAGAACGAACCGAAGATAGATAGACGGAGAAAACCCTTCCTGAATGATGATTTGAATGAAACACTGTTTACTATAACTGACTTGACGTTTGAAGAACAAGTTGCAGAGATAAATAAGAGGCGGGAGACATCAAATTATAAGAATTCTATGTACAAATGTACGGCTTGCTTCAAAGGATTCTTAGATGAAACAGCGTATAACGGACACATGACAAGACACACTAACCAATGCGGCGAGTACGAGTGCGACATCTGCAAGACTCACTTCAAGCACCCGCACGCGCTGCGGAAGCACATCACGGCGCACCACACGCAGCGCTTCAGCTGCAACCGCTGCGTCTACGTCACCACGCACAGACAGACGGCGAGACTACACGAGAGGTGGCACAAAGGCACAAAGTATCAGTGTCCTCACTGTCAAGATGAGTTTGTAAAGTTCACGACGTACATGGGTCATATTCGGATCAAGCATCCCTCAGACTTTGTGTGCAGCCTGTGCGGGTACTCCTTCGTGAGCGAGAAGGGCATCGAGCTGCACAAGAAACTCAAGCATCGCCTGCACGACGGAGTGATCCCCGACGACGGCCCGCTCTGTGAGTTGTGCAACGTAAGGTTCGTCTCTCAAGAAGCATACAGGAGACACCTGCACGTCTCCGCGAGGCATAACAGCAGCGACTCGGATTCGAAGGAATTGAACAAATCGAGAAAAAGAACTCGTGCAGTCAGAGAGAAGAAGCAAGACACTGAAAATACAGATGATGACGAAAGAAAGAAGTTATACCCCAGTCAGATGAGGAAAGCTGAAGGACCCATACCTTGTGAACAGTGTGGCCTCCAACTGGAAGATTCCCGAGCATATCATGGCCACTTCCGGCGAATGCATCCGGACAAGAACCGCACCAACTACCCCTCGATGAAGTCGCCCTGCATGTGTGAAGTGTGCGGACGAATGTTTCAAAGCTACGCGCTGTTGAAGGATCACCGCTGGACGCACACCGGCGAGCGACCTTTCGCGTGCGATGCGTGCGGGAAGCGGTTCCGCATGCGGCAGCGGCTCGTGGCGCACCGCCGTGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCGTGAGTGTGACACACGTGCACGCGCCGCGCAGGCAGTACGCGTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCACAGCAACCGACAGCGACACATGTTCATCCACACAGGGCTGAAGCCGTTCAAATGCGAGATGTGCGGCAAGTGCTTCAAGCACGCGAGTGAGAAACGGGCCCATATAACATACGTGCACTTGAAGAAGCCCTGGCCGAAGAGGGCAAGGGGCAAGCGACGGGCGGACAGGCCCGGTCAACTAATGGGTCAAGATTCATTGGCAGGAGCGAGTGAAATGGACATCCCTCAACCAATGTGGACCAACTGCGACCCCAAGATTGGAGACATCAACAACATAATAGATGACAAGCCTATTTATTATAACCTTAAAATATAA
Protein Sequence
MVFFSIFEDESFPLEPNLRASWLKAVGKDSWSPRDRSTVCSEHFSPSDLYETKSGLKKVKTGAVPIRTQDTSIDCGESVSSKVCRICLAVDLHLHPMSMCKLEKAYENLTGITLSNEDELPQKLCTECARRLLNSDKLRSRSLRANSLLQEIVKKQKIITVQSIAAINREDNHLASVLTKKLFEPEHYDSYIEYNEAQDEQTDKTPIQEIEDIKSEKNEEIFINEIYTESNNDIINENNDNDFVVTNYSSDDSLPLETQRKKVKKMKTKEKKRKKVEKIQNEPKIDRRRKPFLNDDLNETLFTITDLTFEEQVAEINKRRETSNYKNSMYKCTACFKGFLDETAYNGHMTRHTNQCGEYECDICKTHFKHPHALRKHITAHHTQRFSCNRCVYVTTHRQTARLHERWHKGTKYQCPHCQDEFVKFTTYMGHIRIKHPSDFVCSLCGYSFVSEKGIELHKKLKHRLHDGVIPDDGPLCELCNVRFVSQEAYRRHLHVSARHNSSDSDSKELNKSRKRTRAVREKKQDTENTDDDERKKLYPSQMRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHRWTHTGERPFACDACGKRFRMRQRLVAHRRVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFVSVTHVHAPRRQYACALCGKAFSTHSNRQRHMFIHTGLKPFKCEMCGKCFKHASEKRAHITYVHLKKPWPKRARGKRRADRPGQLMGQDSLAGASEMDIPQPMWTNCDPKIGDINNIIDDKPIYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-