Mcix010814.1
Basic Information
- Insect
- Melitaea cinxia
- Gene Symbol
- -
- Assembly
- GCA_905220565.1
- Location
- HG992239.1:1338564-1341012[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-09 2e-06 28.1 0.0 1 42 15 55 15 57 0.95
Sequence Information
- Coding Sequence
- ATGCCTCGTAATTATAAAAGAAAAACTAATCGCGGGTCGTGGTCGGAAGACTCCATGATCAAAGCACTGGATGCTGTAAAAAATGGCATGGCATTTAGAACAGCAAGTAAACAATTCGGAGTTCCTGTTATGTCGCTTAAAAGGCGGGCTAAAGGCAAAAATAAAGTAGCTATCGATGGAATAAAATATTTAGGGGGGAAAAAAACAGTCTTTACGGCAGAACAGGAAAATGAGCTCGTGAAGCATATTAAAGATATGGAGACGAGGATGTACGGATTAACACGACAAGATGTTTTATCTTTGGCGTATCAACTTGCAGTAAAAAATAATTTCACCAACCCTTTCAACAGAGAAAAAGCAGGATATGATTGGCTGAGAGGATTCCGTCAGCGGCATCCAGATATAGCCCTTCGTGCACCTGAATCCACTTCTACTGCTAGAGCACGGGCCTTTAATAAACCAGTGGTAGATAAGTTTTATTTCACATTACGATGTATTCAAGAGACAAAAAACCATCCGTGTCACCGTATCTATAATGTTGACGAGACTAGCATATCTACGGTGCCTACCAAAAATACAAAGGTGTTTGCAGGAACTGGACGTAAACAGGTAGCACGAGTTACTTCAGCTGAAAGAGGGGAGACTGCAACAGCTGTAATTTGTATGTCTGCTTCTGGAGCTTTTGTACCACCTATGTTTATCTTTCGAAGGGTTCGTATGAAGATGGAACTAATAGATGGCGCACCACCAGGCTCTGCATGGGCATGTAATTCATCTGGATGGATGAATTTGGAAGTTTTTACCAAATGGTTTGACCATTTTTTAAGCTATACGAAACCTTCTGCGGAGGACCCAGTCCTTTTAATTTTAGATGGCCACCTTTCACACACAAAAAATTTGGAATTAATATTGAAAGCTCGAGAAAACCACGTCACTATTCTGTGCTTGCCTCCACACTGCACACACAAACTGCAGCCGTTAGACGTCAGTTTGATGTATCCCTTAAGTATTTACCACAATCAGTCACTCGAAAAATGGATGAACAACAATCCTGGCAGGCCAGTAACTGTATTTCAGATTGCAAAGATTTTTGGAGAGGCTTATTTAAAAGCAACAGTACCATTAAATGCTATCAAAGGTTTTGCCAAAACTGGAATATTCCCTTTCAATCCGGATGTGTTCACCGAAGTTGACTTTATCGCTGCAGCAACGACCAAAATGGAATTTAATGAAGACTCAAGTGTAGTAGAAACGCTTCCAAAGGTTTCAAACACACAACAACTACCAACAATGGATCCTTCACCAGTACCAGAAACCTTCACTTCACACGTCTTTCCAAATTTGCAGAATAAAACCCCGTCACCAACTCCCATAAATGATGGTAATTTGTCATTTCGGAGTCCTTTGTCGCCATTGCCATCTACGAGCTACGCACGCAACTCAAGTGTATCGCCATCTATTTTGGAAGATAGCCAATGTGAACCTTTTAATGTTACACCAGCTCAGATTCATCCTTTGCCCAAAGTTGTAGGTAAAAGAAGCCATCTTAAGAGAAAACGAATGGACACATCAATTTTAACTAGCACGCCATACAAAAATTATTTAGAGGAAGAAAGAAACAAAAAGACTGATAAAGAAAATAGAACCAATAAAACACAGCAAAATGTAAAGAAAAAGTATCCAAAAAAGAAACAGAAAGGGAAAGGTGTAGGCAAGGGGATGTCAAATAAAAGGAAGAATATTATATCAGAGTCATCTGCACGGAAAATTTTTCCAAAGATGATAGGGGGCGAGGGATGGATAAAATGTTGTGTATGCCAAAGATGGGGCCATAAAGCTTGTGCAGGGATAGATAGCGATGATTTTGATGAATTCATATGTGATTGGTGTAAAATAACGCCAGGAAAGAGGCACTTAGAACTATAA
- Protein Sequence
- MPRNYKRKTNRGSWSEDSMIKALDAVKNGMAFRTASKQFGVPVMSLKRRAKGKNKVAIDGIKYLGGKKTVFTAEQENELVKHIKDMETRMYGLTRQDVLSLAYQLAVKNNFTNPFNREKAGYDWLRGFRQRHPDIALRAPESTSTARARAFNKPVVDKFYFTLRCIQETKNHPCHRIYNVDETSISTVPTKNTKVFAGTGRKQVARVTSAERGETATAVICMSASGAFVPPMFIFRRVRMKMELIDGAPPGSAWACNSSGWMNLEVFTKWFDHFLSYTKPSAEDPVLLILDGHLSHTKNLELILKARENHVTILCLPPHCTHKLQPLDVSLMYPLSIYHNQSLEKWMNNNPGRPVTVFQIAKIFGEAYLKATVPLNAIKGFAKTGIFPFNPDVFTEVDFIAAATTKMEFNEDSSVVETLPKVSNTQQLPTMDPSPVPETFTSHVFPNLQNKTPSPTPINDGNLSFRSPLSPLPSTSYARNSSVSPSILEDSQCEPFNVTPAQIHPLPKVVGKRSHLKRKRMDTSILTSTPYKNYLEEERNKKTDKENRTNKTQQNVKKKYPKKKQKGKGVGKGMSNKRKNIISESSARKIFPKMIGGEGWIKCCVCQRWGHKACAGIDSDDFDEFICDWCKITPGKRHLEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00373971; iTF_00373972; iTF_00373974; iTF_00373973; iTF_00375132; iTF_01525942; iTF_01525943; iTF_00667360; iTF_00951745; iTF_01094849; iTF_01034499; iTF_00951748; iTF_01034502; iTF_01034503; iTF_01034505; iTF_01034506; iTF_01034507; iTF_00711788; iTF_01033676; iTF_00711789; iTF_00177050; iTF_01093019; iTF_01093022; iTF_01093023; iTF_01094848; iTF_01034504; iTF_01033663; iTF_01033666;
- 90% Identity
- -
- 80% Identity
- -