Maur009377.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meliscaeva auricollis
Gene Symbol
L
Assembly
GCA_948107695.1
Location
OX403619.1:30912158-30928295[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 5.3e-06 0.0005 20.7 1.7 1 23 244 266 244 266 0.98
2 16 0.44 41 5.3 5.8 1 23 272 294 272 294 0.98
3 16 2.3e-07 2.2e-05 25.0 3.1 1 23 300 322 300 322 0.99
4 16 1.1e-05 0.001 19.8 0.3 1 23 328 350 328 350 0.98
5 16 3.6 3.4e+02 2.4 0.3 3 23 414 436 412 436 0.84
6 16 0.0036 0.34 11.8 0.4 2 23 454 476 453 476 0.97
7 16 0.073 6.8 7.7 1.3 1 23 558 580 558 580 0.97
8 16 0.0004 0.037 14.8 1.1 2 23 588 609 587 609 0.95
9 16 0.00038 0.035 14.9 0.7 1 23 617 642 617 642 0.88
10 16 0.0014 0.13 13.1 2.9 1 23 734 756 734 757 0.96
11 16 0.001 0.094 13.6 4.6 2 23 944 966 943 966 0.96
12 16 0.12 11 7.1 0.1 1 23 972 994 972 994 0.92
13 16 1.7 1.6e+02 3.4 0.5 2 23 1002 1023 1002 1023 0.93
14 16 6.7 6.3e+02 1.5 0.3 2 23 1113 1134 1113 1134 0.92
15 16 0.0061 0.57 11.1 0.0 1 23 1144 1166 1144 1166 0.97
16 16 2.2 2.1e+02 3.1 1.2 1 23 1173 1195 1173 1195 0.92

Sequence Information

Coding Sequence
ATGATGGCATTAAAAATGCTATATCGAGGCCCAAGTTCAAGGCTGGAAAATTTAATTGAAAAAATACAAGCCACCAAAGATGGAAATCCAGATCTGTACTCGACACACACCTCGTCcagctactcgccctccatgtcggatgggacaattactccaaactcgctccatcaccatcatcttcatcatcaccatcatcatcagcaacagcagcagcagcagaggctgcatcatcacttgcagcagcaataccaatgcgaacaacaacaacaacaacagaatagcggcagtggtcacaaccgcgacaggcatcacaatcgacgtgtttcagccttaaatggagcaactgctactggtgtcactactggtagcggcggtggcggcgaggacgATGAAGACAATGATGAAGACGACGAGGCTGGCGATGGGGATGCAGACGAAGATGACGACGCCGCAAATTCTAGCGAGGAAAGGGTTTTCCTTACGTCAAATGGTGGCGGCAGCGGTGGTGGTGGTGCGAATGATGCTGCTGGAACAAACACCACAACCACCACCAACAGTTCTTCTACCACCTCGAACAACATCAGTGGCGCAACCAGCGGCAGCGGTGGCGGTGACAAACATTCCGTGAAAATTCCAACGAAATTGCGGAAAATCGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGATATCTCAAGAAGCATGAACAGAGTCATGCGGAGCACCTACCATTCAAATGCGACTACTGTGCGAGACTTTTCAAACACAAACGGTCTCGTGACCGACACACTAAGTTGCATACTGGAGATAGACGATACAGGTGTCCACATTGTGAGGCGGCATTTTCAAGAAGTGATCATTTGAAGATTCACATGAAAACACACGACAACCAAAAGCCATTCCAATGCACCATCTGCAATCGAGGCTACAATACAGCTGCAGCATTAACATCACACATGCAAAATCACAAGAAACAAGCAGCAATACTTGCTGCTGGCGGTAATCCGGCTGCAATCAATTACAGTCCCCGATCAACTGGTTCCGGTTCGAGTAATGGCAGCTTACAAAAACGTCGCTACACATCCATTGCCAATACTAAAAGTCCAAGTCCAAGTACGCTGGAGTATGCCAAGCGTATGCGTAGTTCCTATGTCTCATGCATGTATTGCACAAAATCTGACTTCACATCAATGGAACAGTTAAGCAGCCACATTCAAGCAATGCATGAGAAGGAAGCACTTGCCAATCAGTCGGTGAGTGCAAGTGGATTTCAAATGTCATGCGAATACTGTACAATGAAGTTTCCCAGTGTTCCGGCAATGTTTCAACACATGCGAACAACTCATATTGATCGTTTGTCAAGTCCGAGTAGCTATTTCGAACATTTCAATCGGTTAGCTGCAACTGGTAATTTCAGTCCACGATTACCAACTCCCAAGTCATCGAATGAAACAAAGATCAAAGTTGAAGAACCAAGCCCTAAGGGCGAAGAAAAAACCGATGACGAACCAACTGATTTGAGTCAAAACCGACGATCCGTTCAGACACCGTCGCAAGAATCCCCCGAAGCTAACGACAGACCGGGTGTATTCTTCTGTAATCAGTGCAGCGATGGGTTTCCTGATTTTGACAGTTTCCGTAGTCATTTGAAGTCACACATAGTCCAAGGACTGAATTTGGTGTGTCACCATTGTGGTCAGACCCTCCGGGATCAACCAGAGTACGAAAGGCACATTGTTTCCCATTTTCTCATCACTTGCTCGGAATTTGCTTGTACCGAAAAGAATTGCAATAAGACCTTCGCAAAGCCAGACGAGCTCCAGAAACATCTCTTCGACAACCACATTCAGACGCTGTTCAAATGTCTCTTGTGTTCAGACCTCTTCGAAACAAAAGTTGCAGTACAAGTCCACTTTGCTTGCGTACATTCCCCGGAAAAGAAGATTTTCCGGTGCTCAGCCTGCATGGACACCTTCCATGGAGAGCAGGAATTCCATATTCATGTGAAAACCCGTCACCAGACAATAGTTGGCTCACCGATCCAATGCATGTTCTGCCGTGCTGTCTGCTCCACCGAACTAGAAATGCATTTCCACTTAGCAGCCCATGCCCGCCAGTTCCGTTGCCCGTCGTGTCCAGAGACGTTCCATGTCGAATTCCTACTCGATCGGCACATGCAAACTCATCATCATGGACAGAAAGAAGTTGAATCTACACCACCTCCTCCTCCCCCACCGGTCAATCCATCTCCAGTAAACTCGATCAATCCACTTTACATGAGTGCTCTCTTCAATAAACCCCCTCCAGCTACTCAAAACAACAACAACAGCATCCTGGATTACAATGCTTTCGCAATGAGCAAGAATCTATTCGCCAATGCCTCAGGTAACAAATTCTACAATCCTCTTCAAGTCGATACTGGATCGGCCATGAAACATCCATCGCTAGTGTATGCCAGTTTGAATCAACGTTACTTTGACACCAATCGAACTATTCTCGAGATGTACAATCAACATCAGCAGGATAAGCTTGCAGCTGGCCCAGTCGCCAGCATGTTCACCAGTCCCAGCAACAACAATAGGAACGCCCCAAAAGCTGCACAAGAGGCCATCAAGCCTTCAGATCGAACTATTGGCAACGGAAGCGGTTTCAGCTGCGGGATGTGTGAACGTAATGATTTTCGTACTGAAGCCGAAATCCACTCACATCGCAAGATCGTGCATAATCTCAAGACAGGGGTTAGTCTTCGATGTGCCTATTGCAGTGGAAACTTCAAATCACGCAGTGAGCTAGAACACCACATGAAGACGTGTCACAATTCAACTGGCAAGCACAAGTGTTTGATTTGCGATGAAATCTTCCCATCGCCTGCAATACTCGCTGAGCATAAGTTGCAACACTCAAAAGTCGGCCAGTCTGGAAAGTGTTCGCACTGCGCCAAGTCTTTGCCCGATGTCATGGCTTTCAAGGGTCACCTTCTTGATCACAACACTGAGGGTCAGATGCCAGTTCAATGCATTTGCTGCCGCCAAACACTACACTCCGATTTTGAAATCGGTCTGCATGCCAAGTTCCACACCAAATCGTCATGCATTTCCGAGAGTGTCTGTGCCCTATGCTTGGAACCAATACCCAACACAGTGGATGCTAAGGTTTGCGAAAAGTGCTGTCGCAAGCACAATCTCAACAACAAGTATTCGAATCAGCGAAACACCTTCGATAGCAATTCGGGGCAGTCAAACTACGTCGAGAACCGTTGCAATCTTTGCAATGTCATCATGCCCCACGCACAGAAACTACAAGAACACTTGGTCGAGCACACTTTCGCCGGTTGTGAAGATAGAGGCTTCTCGTGCTACATCTGTTCGGCAGTCTTCACAGCTCCAGCAGGCCTATTAAGTCACATGCTCGAGCACGGAACCAACTCACGCCCCTACGACTGCAACCTTTGCAGTGACAAATTCTATTTCCGCGCTGAATTGGATCATCATTTAGTCGATCACGAAACTCGAGATCGATCAAAGAACTCTTCACAAGCAGCTGTTAGAAATGCCAGCCCTGTAACTGAAGACAACAAATCTTCATTTCCCGCACCATCCCCACCTGTGGCAGAAGAAGAAACTACAAAACTTGAGCTTAAAAATGAATCGCTCGAAGAGAAACCAACCGAAGAAGACGACGATGAATACATCGAAGTTGAGAAAGTTCCCGAAACAATTATAACATCGCAGGAGAAATCATCACGTTCTTCAGACAAGGACGAATAG
Protein Sequence
MMALKMLYRGPSSRLENLIEKIQATKDGNPDLYSTHTSSSYSPSMSDGTITPNSLHHHHLHHHHHHQQQQQQQRLHHHLQQQYQCEQQQQQQNSGSGHNRDRHHNRRVSALNGATATGVTTGSGGGGEDDEDNDEDDEAGDGDADEDDDAANSSEERVFLTSNGGGSGGGGANDAAGTNTTTTTNSSSTTSNNISGATSGSGGGDKHSVKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPAAINYSPRSTGSGSSNGSLQKRRYTSIANTKSPSPSTLEYAKRMRSSYVSCMYCTKSDFTSMEQLSSHIQAMHEKEALANQSVSASGFQMSCEYCTMKFPSVPAMFQHMRTTHIDRLSSPSSYFEHFNRLAATGNFSPRLPTPKSSNETKIKVEEPSPKGEEKTDDEPTDLSQNRRSVQTPSQESPEANDRPGVFFCNQCSDGFPDFDSFRSHLKSHIVQGLNLVCHHCGQTLRDQPEYERHIVSHFLITCSEFACTEKNCNKTFAKPDELQKHLFDNHIQTLFKCLLCSDLFETKVAVQVHFACVHSPEKKIFRCSACMDTFHGEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKEVESTPPPPPPPVNPSPVNSINPLYMSALFNKPPPATQNNNNSILDYNAFAMSKNLFANASGNKFYNPLQVDTGSAMKHPSLVYASLNQRYFDTNRTILEMYNQHQQDKLAAGPVASMFTSPSNNNRNAPKAAQEAIKPSDRTIGNGSGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKSLPDVMAFKGHLLDHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHTKSSCISESVCALCLEPIPNTVDAKVCEKCCRKHNLNNKYSNQRNTFDSNSGQSNYVENRCNLCNVIMPHAQKLQEHLVEHTFAGCEDRGFSCYICSAVFTAPAGLLSHMLEHGTNSRPYDCNLCSDKFYFRAELDHHLVDHETRDRSKNSSQAAVRNASPVTEDNKSSFPAPSPPVAEEETTKLELKNESLEEKPTEEDDDEYIEVEKVPETIITSQEKSSRSSDKDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01542500;
90% Identity
iTF_00427670;
80% Identity
-