Basic Information

Insect: Meliscaeva auricollis
Gene Symbol: RREB1
Assembly: GCA_948107695.1
Location: OX403617.1:28557348-28564783[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.034 3.2 8.8 0.8 1 21 244 264 244 266 0.93

2 14 0.00032 0.03 15.2 0.2 1 23 276 298 276 298 0.98

3 14 9.1e-06 0.00085 20.0 5.2 1 23 304 326 304 326 0.98

4 14 0.03 2.8 8.9 2.8 2 19 527 544 527 544 0.97

5 14 4.4 4.1e+02 2.1 0.6 1 19 590 608 590 610 0.78

6 14 0.0084 0.78 10.7 0.1 1 23 759 781 759 781 0.97

7 14 0.00017 0.016 16.0 1.7 1 23 790 812 790 812 0.99

8 14 0.00044 0.041 14.7 2.0 1 23 818 841 818 841 0.97

9 14 0.0009 0.084 13.7 2.1 1 23 1192 1215 1192 1215 0.95

10 14 8.1e-05 0.0076 17.0 0.3 2 23 1523 1544 1522 1544 0.97

11 14 0.14 13 6.9 6.3 1 23 1550 1573 1550 1573 0.97

12 14 2.9 2.7e+02 2.7 6.3 1 23 1685 1707 1685 1708 0.95

13 14 0.08 7.4 7.6 1.1 3 23 1757 1777 1756 1777 0.91

14 14 0.0013 0.12 13.2 4.8 1 23 1783 1805 1783 1805 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.034	3.2	8.8	0.8	1	21	244	264	244	266	0.93
2	14	0.00032	0.03	15.2	0.2	1	23	276	298	276	298	0.98
3	14	9.1e-06	0.00085	20.0	5.2	1	23	304	326	304	326	0.98
4	14	0.03	2.8	8.9	2.8	2	19	527	544	527	544	0.97
5	14	4.4	4.1e+02	2.1	0.6	1	19	590	608	590	610	0.78
6	14	0.0084	0.78	10.7	0.1	1	23	759	781	759	781	0.97
7	14	0.00017	0.016	16.0	1.7	1	23	790	812	790	812	0.99
8	14	0.00044	0.041	14.7	2.0	1	23	818	841	818	841	0.97
9	14	0.0009	0.084	13.7	2.1	1	23	1192	1215	1192	1215	0.95
10	14	8.1e-05	0.0076	17.0	0.3	2	23	1523	1544	1522	1544	0.97
11	14	0.14	13	6.9	6.3	1	23	1550	1573	1550	1573	0.97
12	14	2.9	2.7e+02	2.7	6.3	1	23	1685	1707	1685	1708	0.95
13	14	0.08	7.4	7.6	1.1	3	23	1757	1777	1756	1777	0.91
14	14	0.0013	0.12	13.2	4.8	1	23	1783	1805	1783	1805	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATTAAGAAAGAAATTACTGATATATCACTGAGAAAAATGGATCGACGCCAATCAACAACATCGGATTCATCTGTTGAACCCATGGACCTGGGTCGTTCAACTTCGAACCAAATCTCCACAGATATTATGACAGATCATAGCAACATTGCAACATTGCAAACATCAACACAAATTAAAGATGCCATTTTATTAGATGCCAATACCAAATATCGCTATGAATCCGATGCCGACGAGTCGGCCGATGATAGAGATAGAGATCATCAAAGAAGATCACACAGTCAACATCATTATCATCATCGTCGGCGGACAAATACTGGACGTGATAAACGTACTGTCCTCATGGAATGCACCGACAGTCCACATTCATTGCGAAAGAAATTTCGATTTAGCAACAGCAATCACAATCACAATAATAATTCTGCTATGCCTGACACTGTGATTAATTTAAAATCAAAAACATCGAATATTAATAATAATAATGATTCAATAAAATCAACTACGGCATCAACAAATCTTACAACAACAACCAACAACGAATCGGGATTTGTGGATGCTAGCAATAGTCATGTTTTAAATACATCCAATtcatcggcaacatcatccacatcatcatcgtcgccgacatcatcttctgctgcgtcaccatcTGCAAGTAATATAGCGTCAGCGATATCGAGTCCCGAGTCGGGTATGGGTGAACGTGACGATATGAAGTACCTTTGCCCAATTTGTGAGGTTGTATCGGCGACACCCCATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTCTATCATCTGCCTCTTCATTGGATCGGCATGTTTTGGTGCACACTGGTGAGCGACCCTTCAACTGCAAATATTGCCAATTGACATTCACTacaaatggcaatatgcaccgtcacatgcgaacccacaaacaacaccagcaacattatcatcgcaattcaaatggtacaaaaGGTGCAAATGGTAGCAGCTCAAGCTTATTACCAGTTGTACCACTTACTGATCAATCGTCAGCTGCGCAAACATCAGCGGCCGTAAGTGTTTTGCCTTCAAAGACTTCGACGAATACGAGCAATGGTGCGGTTTGCAATAGCAATGGTGACACAATTGCGGGTGGAGGAGATGGTTGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAGTTCCAATAACAACAATAATAGCAATACAAACAACAAAAACATAAGCAATTTTAAACGCAAGAGCACCGACAGCTTGGATGACTTGTCCATTATGAAACGACGCGTGAAGACGACGATTAACAACAACAATATTATCGATAGCATTCACGCCATCCCAGAGAAGATTGGTATTACCGAAGTACCAGGCGACATCGAAGATGTTAAGCAACAACAACAACAAAAGCTCTTTTGTCCGGTGTGCAATCGTGACGATTTTGTAGGGATGCTCGCATTGGGAGCCCATATGGACAGCGATCATTCTGAAATTCCAGCAAAGTGTCGTCACTGTGATGTAGTTTTTAAAACACACAAACAGCTTAACGTCCATCCGTGCACCAGTAAGCTAAAAATCACACAAGGTTTTAAGGATCTGACGTTTGTTGATTTTTCAAGCGAAAAATTCCCGTTAATTGCAAAGTCTCTGTGTGAACAGAGTATTCGGGCGCCAGTTGGAGGTCAGAAATTCGAATGCTCAAAGTGTTATCGTGCATTCCCATGTGCCAGTGCAGTTGAAATTCACGAAAAAGATTGTGCGACATCAGGTTTGAATCTATTTGTTGACTTTCCGAAACGAAAGCAAAGATCTTACAGCGAGAGCTCAGGAAATGCAGACGATGACGATAATCGGCGCGATGAGTTTTTCAATAGGTTGTACTTAACAAACAAATCAACAGCACATAGCATGACCAGTTTATCAGTGTCCTCTCCATCTCTGTCCGATGTTAAGTCCTCCGAACTTGAAAAGACCCCCGTAAAGAACTCCCAATTAGAACAGTACCAGGACACTAAAGAACTTGCTGACATTCAATCGATCCTCAACATAACTTCATCCTCGTCAACGAGCAATTTTCTGCGTAACTTTGAAAATTCAGTTAATGCACCAATAAGTAATTATGGTGCAGAAAACGGAGAAGAAGAAGCTCAGGATGCGTTCACGTCAGAATTTCGAAAAATGAAGCTGCGTGGCGAGTTTCCATGCAAGCTTTGCACAGCTGTCTTTCCTAATTTACGCGCACTCAAAGGTCACAATAGAATACATCTTAGTGCTGCTGGTGCTGGACCTTACCGATGCAATATGTGTACGTACTCTATACATGAcaaagcagctcttgtccgacacatgcgcacgcacaacggtgatagaccttacgagtgtgccatctgtaattatgcattcacAACAAAAGCCAATTGTGAAAGACATTTGCGAAACCGTCACGCGAAGACAACACGTGACGAAGTAAAACGTGCCATTATCTATCATCCATCAGAAGACTCTAATTGTGATGATGCCATGAAGAAGTTGCACATGTTCTCATCACCTGAATTCGATCAGGACGATATGGAGCAACACCACCCACCCAAAGATCGCTCAACTCCGGTTTCTCATTTGAAGGAAATGCTTCAAGCCGAATCCAAGCCAATGAAAATCCAAGTGAAGAGTCTGGAAAAGTTGATTGACAAACCATCGTTCAATCAACCTGATGAGCTTCAAAAGGATCACGAGCCAATTATCATACCGCAACAAGAAAAAGAACTCATCAGACCGATTGATCTTAGTATGGATGCATTGGATCTGAGTAAAAAATCTATCAAAATTGAGAAACTCGACGAGAAACGACCCCAATCTCCACCACCACCACCACCAGCGCCACATATAAGTGCGGTGCGTCCACAAACCGTCGGCGAGCCCAATATCGACATGCGACTTCTTGAGAAAAACCAACAGCTCTTGCTGGCTCAGCAAAGGCTTCTTAACGAAGCAATGCCAAAAATGGATCCCGCACACTATTTCCAACTATCTCAGCTGTACAATAACTTGGTGTTCCAGCCACTTAATCCATTTCCATTTCTACAAAATTCCTTTCTTTCAAATAACATCAGTGATTTGAATAAATTTGCTCCCATGGTGAATCCTCTTTACACTGGAACCCCTGTTGAGAGCCCCGTTGCACGCGTGGATAAACAAAATCAACAAATTTCGCAACCAAAACCCACTCAGGAAGAGGTCAATTCATCGATGAAACAAGTTAACTCACAAGCTCAGTCTCCAGTGCCAGCTCAGAGTCAGCCATTGCCACGAAACCCAACACCATCCCTATCGCAAATGCCTGTGTTGCCAAGAAGCCATCAGCACCTTATGAGTGGTACTCATCCTTCGGGAATGCTGCCATCTTCTTTGCCAAGTTCAGGCCCCGTAAAAATGGTCATCAAAAATGGAGTTCTTATGCCGAAACAAAAACAACGACGCTACAGAACCGAACGTCCGTTTGCATGTGAACATTGCTCGGCTCGATTCACACTGCGCTCAAACATGGAACGTCATATCAAACAGCAACATCCTCAATACTGGGCACAACGGCAACGCAGTGGCCATCACATAATGCGTGGTCGTGCCAACAGTTCCTCGTTACACTCTCACTTGCCGTCAGCTCACTCCCCATTGGAATCGCCCCATCCAATTAGCAATAGTGGCATGATGACAAATCCCTTGAGTGCCATTTCAGATCAAGTAAAATATGCCATACTTGCCCAACAACTAAAAGCCCGCAAAGAAACCGATATTCTGCAACAGGCCTTGTCGCAAGGATCCAACAGCGTGCTTGCGCAGAATCCAACATCTGGCATAAACACCATCCGTCAGTCTCTCAGCGCATCCTCGAATACCAATAATGGCAGCACTGAAGATGATGATCCAAAACTTGTAATTGACGAAGACGACGATGAGCAAGAAGATGAAGAAGAAGACGAGGAAGAAGAGGATTGCGAAGATAGAAAGCCCGAAAATTTGACCAAATTTCAAGACTTTCCAGAGCAAACGGCAAATGAAGCTGCAAAAAAAGTCGCCGAATCTATCCTCGAGCAAGCAATGAAAGCTGGAAGCACTAAGATTTCATACACTAACGATGAAGATCTTGATCATAAAGTTGGCAAAGACTTTGGTCTAAAACTATCGAAAAATATGATTGCTCAAGCTGAATCGGTGGGCAAGTTTCTCAAAGAAGTAGCCAGCTCTCCATTTAAGGATGAATCAAACGATTTGGTATCAGTGTCCAAGTTAGTTGATAATGCAACTAATTCGATGTCTTTTAACACCTATTTTCGGCCCAGTGACGTTGTCAATCAAATGGAGCAAAGTGACGAGGAGGGACTCGTTGCATCAGGTAGTGCATCGGAAAGTAATAATTCAGGACCGGAAGACATGGTCAGCTCGCAAGAGCCGAAGAAAAAATCAGCTTACAGTTCAGCACCTAACCGCGTTTCCTGTCCATATTGCCAGCGAATGTTCCCATGGTCAAGTTCCTTGCGAAGACACATTCTCACCCATACCGGCCAAAAACCATTTAAGTGCTCACATTGCCCGCTACTCTTCACAACCAAAAGCAATTGCGATCGCCATCTCTTGCGAAAACATGGAAACGTTGAATCTGCTGTATCATTGTATGTTCCCATTGAGGATGTAAATGAGCCCTTGCCAGTGCCCAAATCCGTCGAAGAAATTGAACTACAACAACAACAGCTGCTTCTCCAACAAAAACAACAAAGACGGCTAGAAGAACTAAAAGAAATGGAAAAAATCCAACCAACAACACTTCAAAAGCCAGCCGAAGGAAATCAAGAGTTGACAACGAGCATTAATTCAACCACAACCACAAGTTCTACAAATGCTGGTGCTAAGCAGCTTGAAACGATGCCATCATCCCAAGTGATTTCCTCATCTCAAGTGATTTCATCTTCAGAGTTGCCATTTAAGTGCCATCTGTGTGACAGTTCATTTGCAGAAAGATTTCAATGCCTAGATCACATTAAAATCCATCATGCTCAAGAATTTTCCCTACTTCTCTCCAAGGGTGCGATTGACAATGAAGCCGATGTAAACAGCCAAGTCCAGTCCACCGAAGATGATGAAAAACGCGACGAAAGCCGAGGCAAATATCCAGACTACACCAATCGTAAGGTTATTTGTGCTTTTTGTATGCGGCGTTTCTGGTCCACTGAGGAtttgcgtcgtcacatgcgaacacattctggcgaaagaccattccagtgtgatatatgtttgcgaaaattcaccctgaaacacagcatgctgcgacacatgaaaaaacacagcggtgGCAGCCATTCGAGCAACGGCAATGCCAATGCAGGCAACAGTGGATCTGATGTCTCTGATGATGAACAACCACCATCTAGTGTTATGCTGGCCAACGCCTTACGTTCTCACAAAATCCAAGAGCTTTTCTCCAAGGTCAACAGCGAATGGCGCAATAATCGTATGTCGGGTGAGCACAAAGAGAACATCGAAGAGCACAACAACCAGTCTGATCTTATTGGTAATTTACTGGGAATCAGTGACCAAGGCATTCTAAACAAATTGCTGTCGTCAGCTGATGAAGCTGCTAAGTTTCTTGGCGTTGAAAAGTAG
Protein Sequence: MLKTSIKKEITDISLRKMDRRQSTTSDSSVEPMDLGRSTSNQISTDIMTDHSNIATLQTSTQIKDAILLDANTKYRYESDADESADDRDRDHQRRSHSQHHYHHRRRTNTGRDKRTVLMECTDSPHSLRKKFRFSNSNHNHNNNSAMPDTVINLKSKTSNINNNNDSIKSTTASTNLTTTTNNESGFVDASNSHVLNTSNSSATSSTSSSSPTSSSAASPSASNIASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGSSSSLLPVVPLTDQSSAAQTSAAVSVLPSKTSTNTSNGAVCNSNGDTIAGGGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNKNISNFKRKSTDSLDDLSIMKRRVKTTINNNNIIDSIHAIPEKIGITEVPGDIEDVKQQQQQKLFCPVCNRDDFVGMLALGAHMDSDHSEIPAKCRHCDVVFKTHKQLNVHPCTSKLKITQGFKDLTFVDFSSEKFPLIAKSLCEQSIRAPVGGQKFECSKCYRAFPCASAVEIHEKDCATSGLNLFVDFPKRKQRSYSESSGNADDDDNRRDEFFNRLYLTNKSTAHSMTSLSVSSPSLSDVKSSELEKTPVKNSQLEQYQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGAGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELQKDHEPIIIPQQEKELIRPIDLSMDALDLSKKSIKIEKLDEKRPQSPPPPPPAPHISAVRPQTVGEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFPFLQNSFLSNNISDLNKFAPMVNPLYTGTPVESPVARVDKQNQQISQPKPTQEEVNSSMKQVNSQAQSPVPAQSQPLPRNPTPSLSQMPVLPRSHQHLMSGTHPSGMLPSSLPSSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSLHSHLPSAHSPLESPHPISNSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSNSVLAQNPTSGINTIRQSLSASSNTNNGSTEDDDPKLVIDEDDDEQEDEEEDEEEEDCEDRKPENLTKFQDFPEQTANEAAKKVAESILEQAMKAGSTKISYTNDEDLDHKVGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLVSVSKLVDNATNSMSFNTYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQLLLQQKQQRRLEELKEMEKIQPTTLQKPAEGNQELTTSINSTTTTSSTNAGAKQLETMPSSQVISSSQVISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDNEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGNANAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVNSEWRNNRMSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -