Basic Information

Insect: Meliscaeva auricollis
Gene Symbol: ZIPIC
Assembly: GCA_948107695.1
Location: OX403616.1:25470344-25479388[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00045 0.042 14.7 1.6 1 23 10 33 10 33 0.95

2 20 1.2e-06 0.00011 22.8 0.3 2 23 115 136 114 136 0.97

3 20 3.1e-07 2.9e-05 24.6 1.3 1 23 142 165 142 165 0.96

4 20 0.0015 0.14 13.0 0.3 1 23 171 193 171 193 0.99

5 20 5.1e-05 0.0047 17.7 1.9 1 23 267 289 267 289 0.98

6 20 4.1e-06 0.00038 21.1 3.3 1 23 294 317 294 317 0.97

7 20 0.0011 0.11 13.4 1.2 1 23 323 345 323 345 0.99

8 20 0.0027 0.25 12.2 2.0 2 23 484 505 483 505 0.98

9 20 7e-06 0.00066 20.4 1.5 1 23 511 534 511 534 0.97

10 20 3.6e-07 3.4e-05 24.4 2.0 1 23 540 562 540 562 0.99

11 20 0.85 79 4.4 1.7 2 23 642 663 641 663 0.92

12 20 8.8e-06 0.00082 20.1 0.8 2 23 712 733 711 733 0.97

13 20 4.7e-05 0.0044 17.8 4.2 1 23 739 762 739 762 0.92

14 20 1.1e-05 0.001 19.8 1.2 1 23 768 790 768 790 0.98

15 20 1.2e-05 0.0011 19.6 2.6 1 23 839 861 839 861 0.98

16 20 2.9e-06 0.00027 21.6 0.3 1 23 867 890 867 890 0.97

17 20 0.00037 0.034 15.0 1.7 1 23 896 919 896 919 0.95

18 20 3.8e-05 0.0035 18.1 2.8 2 23 952 973 952 973 0.98

19 20 2.6e-06 0.00024 21.7 0.3 1 23 979 1001 979 1001 0.97

20 20 0.0019 0.18 12.7 9.5 1 23 1007 1029 1007 1029 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00045	0.042	14.7	1.6	1	23	10	33	10	33	0.95
2	20	1.2e-06	0.00011	22.8	0.3	2	23	115	136	114	136	0.97
3	20	3.1e-07	2.9e-05	24.6	1.3	1	23	142	165	142	165	0.96
4	20	0.0015	0.14	13.0	0.3	1	23	171	193	171	193	0.99
5	20	5.1e-05	0.0047	17.7	1.9	1	23	267	289	267	289	0.98
6	20	4.1e-06	0.00038	21.1	3.3	1	23	294	317	294	317	0.97
7	20	0.0011	0.11	13.4	1.2	1	23	323	345	323	345	0.99
8	20	0.0027	0.25	12.2	2.0	2	23	484	505	483	505	0.98
9	20	7e-06	0.00066	20.4	1.5	1	23	511	534	511	534	0.97
10	20	3.6e-07	3.4e-05	24.4	2.0	1	23	540	562	540	562	0.99
11	20	0.85	79	4.4	1.7	2	23	642	663	641	663	0.92
12	20	8.8e-06	0.00082	20.1	0.8	2	23	712	733	711	733	0.97
13	20	4.7e-05	0.0044	17.8	4.2	1	23	739	762	739	762	0.92
14	20	1.1e-05	0.001	19.8	1.2	1	23	768	790	768	790	0.98
15	20	1.2e-05	0.0011	19.6	2.6	1	23	839	861	839	861	0.98
16	20	2.9e-06	0.00027	21.6	0.3	1	23	867	890	867	890	0.97
17	20	0.00037	0.034	15.0	1.7	1	23	896	919	896	919	0.95
18	20	3.8e-05	0.0035	18.1	2.8	2	23	952	973	952	973	0.98
19	20	2.6e-06	0.00024	21.7	0.3	1	23	979	1001	979	1001	0.97
20	20	0.0019	0.18	12.7	9.5	1	23	1007	1029	1007	1029	0.99

Sequence Information

Coding Sequence: ATGCGTTGTCACAACCATGAAAGGCCACATATCTGTACAACTTGTGGTAAAGCTTTCAAAGACGATTGGAGGCTAAGGACTCACATTAAATTAAAACATGCTTCAAATTCTAAAAAATTTAGTCACAGAAAAAAGAAAAGGAATCTCAATCGCGAGAAATCATTGCTGCCACCTGTTATTGGCAACGTGGATGAGCAAAATCCAACAAATGAATATTTGAATATTCCACAAGACAATCTCAATGCAACCGAATCTGATGTTGTTCAAGCAAATCCCGAAACAACAGATCAATCGAAGATTCCAATTGATACTACATTGTCAAATATTGAACCGGTAAAGATTCCTTGTACCCTATGCGATAAAGTATTCCAGTTTGCTTCACAACTTGAAACACACATGCGAACTCACACCGGTGAAAGGCCATATGCCTGTCCTACTTGCAATAAGACCTTTACACAAAATGGTCATCTTAAAAATCACATCCTAATAAATCATAAAAAAATAATGCCCTTCCAATGCAGTGTTTGTTTACGTGGATTCGCAAGTGGTTATAATATGAGAGCACATGAAAAAACTCACTTCAATCCGCTTCGCAAAAGCAAAAAAGTAAAATCTAAACCTAAAAAGAGTGATATGTCATCGCAAGTGCATGATGGACATCGTACAGTCGAACAAAATGCGCAAGACATGATTGAAGATCAATTTGTTCAGGATTTTGAAAAACTTGAGCTACATCCTCTTTTTGGATCAATGTCAGCAAGTCAGGATGAAACCCCAAACAAGAAGACAAATAGTTGCTTCTCGTGTACCCATTGCGACAGCACATTTGTGGATCAATTGGAATTCAATGCACACATGCAAACTCATGGCTCCAGACCATTTTATTGTTCAATTTGTTCAAAGTCTTTCAGACAACAAGCTCATCTAAAGATTCACACCCAAATGAGTCACACAAAATCAAGAAATTACAAGTGTGGTGAGTGTGATCGAGTGTTTCTGACATTCTATATTCTCAATAAACACATGAGATCACACAAAGGAAAGAAGAGCAAACCAAAACCTAAGCCCAAAAGAGGAAAGAGAAGAGGAAAATATCTGAAAAAAACTGATAACAAAGAGACAATAAGTACTAATATTGCAAAAGAGGAACATGAACATGAACCTTCCAATGAAGAGATTACGGAAACCAGCAATAATGCAAAGGAACAAATCCAACCAGAAGTAACTGCTGTGAGGGATAACGTTCAAATGTCGTGTGCACTGTGCTCTGTTTTAGTTGATGCTGATAATTTAACCGATCATATGAAACAGTGTCTTAACATATCACAGTCTACAAACATTCAAGTTAAATCAGAGCCCTTAGAACATCCACAACTTTTAGATCATCCACTTTTCGAAACACTTTCAAATCAAGACGAACAAAAACACACTGTCACTGGTATTTCAAAGCAGTGTACGGAATGCAATGAAGAGTTTTGTAGTTTCTTGAGCTTTGCTGAGCATATGCGTATTCACAAGGTTGAAAGGCCTTTCGTTTGTACAACTTGTAGTAAAGCTTTTAAAAAAAATGCACATCTAAGGTCCCACATAATGATAGTTCATCAAAGAATACTACCATACAAGTGTAACGAATGTCCTCGTGTATTTTCCAGCAAATACAATCTCACTATGCATTCAAAAACTCACCTCGCAAAAGTCAATTTGAAAAAAGGAAGTTCTAAACGACGTGTAATTGTTAAAAAGAGTTATTATAAAGATCCACCATATCACGCCAAACCTTGTCTTAACGAAAATGCAAATACAACCACATCCAGTGTGAGTGAGAGAGATGAAAGTCAGACCGTTACAACAAATTGTGAATATCCAAACCAGCTGGAACAAAATGAAATACAATTATCCGTTGATGGAAATGAGAACAAAATAAGATGTACATTGTGTTTTATTTCAATTCACTCAGATAATTTTTCAAAACACATGCAAGAATCTCACAATTTATCCGAATCTGTAACGTGTGTGGCAATTAAGAAGGAGGTTGTCGATGATGAATCAGAACAATTGACGCATCCAAACTTGGAGCCTGAGTCAAGTCAGTCTGAGACACCGCATATGCAGATCGAATTACCACGTCGTCTACAATGTCCTACATGCGATAAGGAATTTGTGCACCTTTCGCGACTTAATGAGCACATGCGTGCCCACAGCGATGAAAGACCATTCATCTGCTTGGTTTGTGGAAAGACCTTCAAACGACATGGTCACCTTACAACTCATATAGCGGGCTGTCACAGAAAAGCTAAACCATTCAAATGCAAGGATTGCCCTCGGACGTTTTCAACTAGTTTGAACTTGGATGTTCATTCCCAGACACACATTCGTGAAGAGCTTTCTACAGATTTTCCTATTGATACGAACATAGAAAGCGAAATGGACTTTGAGCCACCCCAGAGTAATGAATCTCATCCTCCATGTAATTTAGGTGCTGAACTAATAGAAAAATGTACCGCTGAAGAGACCCATCAGTGCACCTTATGTCCCACAGTATTTAAATCCATTTCACATCTCATGGAACACATGAAGGTCCACACCAGTGATCAACCTTTTATTTGTTCTCTTTGCGGCAAGGGTTTCAGTAGCAATGATGACCTCATCACTCATCGTTTAACGAGACACAATAAATCAAAACCCTATCAATGTGACCAGTGTGAACGGGAATTTAGAACAAGCTTAGGACTCAAAAAACATCATCTATTGATTCATACCAATAACCATCAACGGGCCAAAAAAGCAATGCGTCGTAATTTTAATCGGGAGCCAAATAATCAAGAACCATTAAGCCATTCGAAGGACATACCTCAATGTCATATTTGTAACAAAAATTTTACCAACAATTGGGTACTTAAAGAACACATGAAATACCATACATGTGAAAGGCCATTTATCTGTCCAATTTGTGGACATGGGTTTGCTAAGAAATATAATCTCAAAATTCATATAATGGCACATAAAAAAATTAAGCCCTTCAAGTGTCATTTCTGTCCGCAATCGTACTGCACAAATTCTGGACGGACTCATCATATGCGAACACATACTCATGGACGTAAGCGAATAAAGATTGACTCATCTAATCCTGAACACTATTAA
Protein Sequence: MRCHNHERPHICTTCGKAFKDDWRLRTHIKLKHASNSKKFSHRKKKRNLNREKSLLPPVIGNVDEQNPTNEYLNIPQDNLNATESDVVQANPETTDQSKIPIDTTLSNIEPVKIPCTLCDKVFQFASQLETHMRTHTGERPYACPTCNKTFTQNGHLKNHILINHKKIMPFQCSVCLRGFASGYNMRAHEKTHFNPLRKSKKVKSKPKKSDMSSQVHDGHRTVEQNAQDMIEDQFVQDFEKLELHPLFGSMSASQDETPNKKTNSCFSCTHCDSTFVDQLEFNAHMQTHGSRPFYCSICSKSFRQQAHLKIHTQMSHTKSRNYKCGECDRVFLTFYILNKHMRSHKGKKSKPKPKPKRGKRRGKYLKKTDNKETISTNIAKEEHEHEPSNEEITETSNNAKEQIQPEVTAVRDNVQMSCALCSVLVDADNLTDHMKQCLNISQSTNIQVKSEPLEHPQLLDHPLFETLSNQDEQKHTVTGISKQCTECNEEFCSFLSFAEHMRIHKVERPFVCTTCSKAFKKNAHLRSHIMIVHQRILPYKCNECPRVFSSKYNLTMHSKTHLAKVNLKKGSSKRRVIVKKSYYKDPPYHAKPCLNENANTTTSSVSERDESQTVTTNCEYPNQLEQNEIQLSVDGNENKIRCTLCFISIHSDNFSKHMQESHNLSESVTCVAIKKEVVDDESEQLTHPNLEPESSQSETPHMQIELPRRLQCPTCDKEFVHLSRLNEHMRAHSDERPFICLVCGKTFKRHGHLTTHIAGCHRKAKPFKCKDCPRTFSTSLNLDVHSQTHIREELSTDFPIDTNIESEMDFEPPQSNESHPPCNLGAELIEKCTAEETHQCTLCPTVFKSISHLMEHMKVHTSDQPFICSLCGKGFSSNDDLITHRLTRHNKSKPYQCDQCEREFRTSLGLKKHHLLIHTNNHQRAKKAMRRNFNREPNNQEPLSHSKDIPQCHICNKNFTNNWVLKEHMKYHTCERPFICPICGHGFAKKYNLKIHIMAHKKIKPFKCHFCPQSYCTNSGRTHHMRTHTHGRKRIKIDSSNPEHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -