Maur000988.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403620.1:9628339-9630639[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-09 2.7e-06 27.4 0.0 1 38 9 46 9 51 0.88 2 2 2.3 2.1e+03 -1.1 0.0 1 15 419 433 419 437 0.78
Sequence Information
- Coding Sequence
- ATGAAAAGGAGATATCAAAGTTATACTGAAGCCTCTTTATCAAGTGCATTAAGAAAAATTCGTGAAGAGAACATAAGCTTTCGAACAGCGAGTAGAGAGTTTGGTGTACCCATTACAACACTTCACGATAAAATTAAAGGCAAGAGTGAAGATGGGCTTAAACGAATGGGCCCGTCTACCGTTTTAACAGAAAATGAGGAAAACAAAATTGTAGAATGGCTTATAAACATTGCCAAGTGCGGGTTTCCCCAAAAAATAAATGAACTTTTAGATGTTGTCCAAAAAATTGTTAGAGACGAAAAGCGAACCACTCCGTTTAAGGACGACAGACCGGGCAAAAAGTGGTACTATAACTTTCTAAAGCGACATAAAGAGATTAGTTTAAGGGTCTCGGAATCTATTAGTAAAAGCAGAGCTATAATAACAGAAGAAAGCATTCGCAAATGGTTCCTTGACCTAAAAAATTATTTATTGGAAATGGAGGCCTTTGATATTTTAGATGATCCTAATCGCATTTACAATGGAGACGAAACTTCTTTTAGTTTGGCGCCGAAAACCGGAAAAGTTTTAGGTCCAAAGGGATTCAAAAATTTATACGACATAAAATCCTCGAATGAAAAAGAAAATTTGACTGTTCTTTTAGTATTTAGTGCCAATGGAGTTACTTTACCTCCTGAAATCGTGTTCCCATACCTTCGAAACCCACCATCAAAACTTGTGGcaaatatgccagaagactggataattggtcgttcagagacaggatggatgagatcagagaccttttacgaatatatagctaatagtttcatcggatggcttagtcagaataatataaaaaaacctgttcttcttttagttgacggtcataaatcacatttgtcaatggccttaaATACCCTGATCGACAAAGAGAAAGCTAAAACTGTTCAAAAGTATGATGCAACTGTTGAAGTATTGTCTTCTCTTAAGACTGAACTTTTAAATCATAATTTTAACTTTGAACTCTTGCTGAAAGTTGTATTAGATACCAAAAAGATCATTGAATCCTCCGAAACTTTTGAACCGCAATTATCTGTAATAAATCAATCACCAAAAAACAACCAAGTAACATTTGACTCATTCCAAGATCTTGAAGATCATATCGTTTTGGATGACATTAATTATAATCCTATACAAATAACAAATACGAACATCGAACCTGGACTATCAGAACTTAACAAGTCTCCTATGCTGAGTAACTTTTCAAATATAGACAACGACGAAGTTCAAGAAGCTATTAATCAAATTTTAGCCGAAGAATATGTTTCTGAAGATATAGATGAAGTATTGGATCCACTTGATCAGCCTGATGCATCTCTTGATTCTAACGAACAGAACTTCTTAAATGATTTGAACGAAAATCCTGGAACACCAAAGTCTAAGCCTGAGTCTTCCAAGTTAGGTCAGAATGTAATAGGTTCACTGAGTAGCCCTTGCTCCAGTTTTGATAATCATTTAAAATACCCAAACCCTATAAGAACAAAACGAGGAAATGAAGTACTGCCTGGTTGTAGACCACCAATGTCTATTTCTTCTAGAAAGTGGAGAGAATTTTATGAAAATCAAGACAAAATAAAACAAAAACGAAAAAACGACATTGACGCCAGAAAAGAGTCCAGAATTAAACGTAAAAATGATAGACTAGCAATAAAAAAAAAACAAACAAAAAAGAAATTTGAGCCGAAAACAAGTCGGAAACAGTCTTGTGGTTTATGTGAAGATGAGCTCGACACAGACGCTGAAGAAGATGGCCTGAAAAATATTGGCTGTGATTCTTGTAACAAATGGTTTCATTTAGCATGCACTCATCTTTGCACCATGAAGTTTGAAGAGGCCCAAAACGAAGATTTTGTGTGTAATTTTTGTTCTTAA
- Protein Sequence
- MKRRYQSYTEASLSSALRKIREENISFRTASREFGVPITTLHDKIKGKSEDGLKRMGPSTVLTENEENKIVEWLINIAKCGFPQKINELLDVVQKIVRDEKRTTPFKDDRPGKKWYYNFLKRHKEISLRVSESISKSRAIITEESIRKWFLDLKNYLLEMEAFDILDDPNRIYNGDETSFSLAPKTGKVLGPKGFKNLYDIKSSNEKENLTVLLVFSANGVTLPPEIVFPYLRNPPSKLVANMPEDWIIGRSETGWMRSETFYEYIANSFIGWLSQNNIKKPVLLLVDGHKSHLSMALNTLIDKEKAKTVQKYDATVEVLSSLKTELLNHNFNFELLLKVVLDTKKIIESSETFEPQLSVINQSPKNNQVTFDSFQDLEDHIVLDDINYNPIQITNTNIEPGLSELNKSPMLSNFSNIDNDEVQEAINQILAEEYVSEDIDEVLDPLDQPDASLDSNEQNFLNDLNENPGTPKSKPESSKLGQNVIGSLSSPCSSFDNHLKYPNPIRTKRGNEVLPGCRPPMSISSRKWREFYENQDKIKQKRKNDIDARKESRIKRKNDRLAIKKKQTKKKFEPKTSRKQSCGLCEDELDTDAEEDGLKNIGCDSCNKWFHLACTHLCTMKFEEAQNEDFVCNFCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -