Maur014803.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403616.1:69186354-69188208[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-11 4.6e-08 33.0 0.0 1 43 15 56 15 58 0.88 2 2 2.3 2.1e+03 -1.1 0.1 14 23 137 146 133 147 0.82
Sequence Information
- Coding Sequence
- ATGCCGCGTAAATATATCCGTAAGACTGATAGAGGAAGTTGGACCGAAGAGGGTTTAGAAAAAGCTAGAAAATCCATCGAGGAAGGTATGTCTATACGAAAAGCAGAAACAGTGTTCGGCATTCCGGCTAGAACACTTTCGAGGCGTATAAAAGAAGGAAATTTTATGAAGAAACCTCTAGGATTCATTGGTGTTCTAGGAATTCAAAATGAGAAGAAGCTTGCGGAGCACGTCAAAAAATTAGCGTCGGCAGGTTTTGCTGTTGATAGAGAAGGCATTCGAAGTTTGGCGTTCGAACTTGCGGAAAAAATGGGTATCAAGCACAAATTCAACACAGAAACTAAAAAAGCAGGTTATGCTTGGTTGGCATCCTTTTTGGAAAGGAATAAAGACATTTCGTTGAGACAGTCTGAGGGACTTTCCCTCTCCCGTGCCCAGGGTATGAATCGTTCAGCAGCGAATGACTTTTTCAAAATTCTTGAGACAATTATGACCGACAacaatttaatttacaagcccggcaatattttcaatatggacgaaagtggtttacaacttaacaataaaccaggaaaggttttgaccaaaaaaggtgcgaaagacgtccatttgcttactgcaaaagaaaagggtgaaaatgtcacagtaatagggtgctgcaacgcagagggaaattttttgccacctgtgttaattatgaaaggagtaaataaaaaaccagagttcgccgacggattaccaagtggctctgaagtttatatgaaccgaaagtcgtcttacatcaatgcagaattgttttttaagtggttgaaagaacacttcacaccgcggaaacctgctgttggtaaaacactgttaatcttagatggtcacacctctcacagcaatgctttcgagatgcttgaattcgctgaaaacaatgacattataattttatgtttaccaagtcataccacccaGGCGTTGCAACCTTTGGACCGCAGTTTCTTCAAACCATTGAAAACGTATTTTCATAACGAAACCAAAGTTTGGATGAATCATCATAAGACGAGAACAATAACAAGGTATCAGGCTGGACATTTAATTGGGGCTGCATGGGAGAAGGCAGCGTCTGTTGGAAATGGAGCTTCAGGATTCAGGGCTTCGGGAATATACCCCTTTAATCCTCAAGCTATTCCGGATCACTTTTTTAGCATTTCCGATGCATCTGCAACGACTCTTCATCCAGATTCGTCTGCAATGCAAGATAACCAACCAACAACTCAGCTTTCTGAAACATCTCCTATTCTTGCAACAGTCTCAGAATTGACTATTCCAACCACAAATAACACCGCGCAATTCTGCAACCATTCAGAAAATGAAACCCACACTTCATCTTGCTTCAATAACCCTACGCCAACCAAACTTCTTCAAGAAATTTCACCACTGCCAAAGATTCCAACACCAAATTTTTCCAGGCAGTTGATTGAGCCGGCTGAGGACATAAACAACTGTGCCGAATGTTGGGAAAACTATTTCTCAACAAAAAAAAAAGAAGATTGGGTCGAATGCAAAAAATGTCGCAAATGGCTTCATGAAAATTGTACCCGGTACAAGAAACCTGGTAACATCTTGTGCACAGACTGTGGGCGTGATGAGGAACGAAAACAACATGTTTCACACTAA
- Protein Sequence
- MPRKYIRKTDRGSWTEEGLEKARKSIEEGMSIRKAETVFGIPARTLSRRIKEGNFMKKPLGFIGVLGIQNEKKLAEHVKKLASAGFAVDREGIRSLAFELAEKMGIKHKFNTETKKAGYAWLASFLERNKDISLRQSEGLSLSRAQGMNRSAANDFFKILETIMTDNNLIYKPGNIFNMDESGLQLNNKPGKVLTKKGAKDVHLLTAKEKGENVTVIGCCNAEGNFLPPVLIMKGVNKKPEFADGLPSGSEVYMNRKSSYINAELFFKWLKEHFTPRKPAVGKTLLILDGHTSHSNAFEMLEFAENNDIIILCLPSHTTQALQPLDRSFFKPLKTYFHNETKVWMNHHKTRTITRYQAGHLIGAAWEKAASVGNGASGFRASGIYPFNPQAIPDHFFSISDASATTLHPDSSAMQDNQPTTQLSETSPILATVSELTIPTTNNTAQFCNHSENETHTSSCFNNPTPTKLLQEISPLPKIPTPNFSRQLIEPAEDINNCAECWENYFSTKKKEDWVECKKCRKWLHENCTRYKKPGNILCTDCGRDEERKQHVSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984156;
- 90% Identity
- iTF_00984155; iTF_00984154; iTF_00984156;
- 80% Identity
- -