Maur018880.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403617.1:21552822-21553910[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-12 1.5e-09 37.8 0.0 4 44 117 158 115 159 0.91 2 3 3.2 2.9e+03 -1.5 0.0 24 37 184 197 178 202 0.75 3 3 8.3e-10 7.5e-07 29.1 0.0 3 39 226 262 224 268 0.87
Sequence Information
- Coding Sequence
- ATGTCAACAATTGTACAATTGGATCAACCCATTCAGCCTACAGCAATGCAAGTTAGCTCAGCAAATGACGAGTACATTATATTTGAACTAAAAAGTGATACTGACAGCACACCAACGTACAGCTATGTCATTACCAATTGCAAAGAACCACCACCTGATTGCTCAAAATCAAAAGAAGATCAAATTTCTGATAATAACGTTCTGAGAGTTACAGAAATTATTGCAAATCCAGGGCCATACATTATCAGTGTTGAAATACCAGTTGAAGAAACGCCATCACTTGAAACACAACCAATAGATATTTGCAAAGAGAATTCACCAAAAGCAAAGCGTGCTTTAGCCCGCAAAAGACTTGCAGAAGCTGTTGATGCTGTAGTTAATAATGACATGACCATTGGTAAAGCTGCCAAAGCTTTTGAAGTGACAAAAAGTACCCTGTGGAAGGAGGTCAATAAACACACCAATCACCGTAAAAAGAAAGTTGACGAAGATCTCAATAAAAAGATCATTGATCGTATTTGTGCTGGTGAATCTTTGTCAGGGATCGCTAGATCCTTGAATGTTGCCAAATCCACAATACACCTTCATAAAGTTCGTCTTTCACAAACTGGCCAACTCCCGCCAAATATAACCTTTAAACCACCTACAGATAAAATAGAACAGCTTGCCATCAAGGAACGTATCATTCAGGCATTTCGTGGCGTTCGAGTGAATGGTATGTCGTTACGTTTGGCATCAGAGTTTTTCTCAGTACCACGCTCAACCCTCTGGAAACACATAAGACGGTTTAGAGCTTCTCAAAGGAAACTATCACCAAAAACCCAAACCTGCCAAGATGATAAATTTATTCAAATGAATTCGGAAAAAACAAGTGAAGAGGATAGCCAAGAAGAAGAAGATGAAGATAGTCCCAAAGTAGATGAAATTATTTCCGATCAACAATCAACCAGAAGTGAGGGTGTCAATCAAGATGATTTTGATTTACTAGATGCTTATTGTGAGCAACAACCAAACAGCGATGAAGGAGATTTCTTCATAAGTTTCGACTTTGAAACATTTGAAGAGTATGTGAAGAGAGAGTTAGAATAA
- Protein Sequence
- MSTIVQLDQPIQPTAMQVSSANDEYIIFELKSDTDSTPTYSYVITNCKEPPPDCSKSKEDQISDNNVLRVTEIIANPGPYIISVEIPVEETPSLETQPIDICKENSPKAKRALARKRLAEAVDAVVNNDMTIGKAAKAFEVTKSTLWKEVNKHTNHRKKKVDEDLNKKIIDRICAGESLSGIARSLNVAKSTIHLHKVRLSQTGQLPPNITFKPPTDKIEQLAIKERIIQAFRGVRVNGMSLRLASEFFSVPRSTLWKHIRRFRASQRKLSPKTQTCQDDKFIQMNSEKTSEEDSQEEEDEDSPKVDEIISDQQSTRSEGVNQDDFDLLDAYCEQQPNSDEGDFFISFDFETFEEYVKRELE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -