Maur019291.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403617.1:29486241-29490145[-]
Transcription Factor Domain
- TF Family
- HSF
- Domain
- HSF_DNA-bind domain
- PFAM
- PF00447
- TF Group
- Helix-turn-helix
- Description
- Heat shock factor (HSF) is a transcriptional activator of heat shock genes [1, 4]: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs [1]. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus [2]. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats [3]. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear [2]. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus [3]. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-12 2.2e-08 34.9 0.5 1 98 21 132 21 134 0.82 2 3 1.2 9.2e+03 -2.4 0.0 42 57 178 193 173 233 0.66 3 3 0.75 5.9e+03 -1.8 0.1 70 70 397 397 362 422 0.52
Sequence Information
- Coding Sequence
- ATGAATTCACCAAAAGAAAATATTTCCACCGTTTCCCGTCAAGACATTCATAACTTCCCATTTCCATATAAACTCTGGATTGCTGTAAACTCCATTTCATGCGAATTCATTAAATGGAACATCGACGGCACCCAAATACAAGTTCAACTTATTGCTTTGGATAGTTATCTCGAGAGCCCAATGTCCATTTTCAAAATCAAAAGTCGTTCTTCTTTTGAGTCTCATTTGCGTAGCTATGCATTTCAATTAATTAAAACCGAAGATATGGAAAGAGAAGATCACGAAGCATATACATCTGATTCAACATGTTCAAGGCCAAAATACAGTGAAATCCTGAAGCACTTCAATCACATGCATTTCCTTCGTCATCGAATCGATTTATTGGCTAACATTAGGCCGACCAACAATATTTCATCTTTGGCGACTTCGGAGTGTGTAATTGGAGAGCAGCAGACTTCCGATATAAATAGTAATCAATTGGAAGGTGATTTGTGCTACAGACGCATTGGATCAGGATCATCGTTATCTAAGGCCCATTTCAAACATCAATTGGTTTTGAATTTTTTATCAGAAGTTAAGACTTTGGAGGCCAAACTGAAAGCATCCGAATTGAGATCCAAAGCCAAGGAACAAGAAGGCAACGATGATGACACAATGATTGAGTTGTCAGCAGAGTTGTTCGAGAATCCTCATGATAGTGTACTCTATATGGGTGATGAACATCGTACTGAATATGCTGGATATTATGGAAACTGCACCAACGAACAAGTTCTAAAATTCTTTGGGCCTTACTTGCCAATGTACGAAAATGCCAATAACGATGAAGGAGAGAAACGAATTGCAAATTTAAATCCATCAGGAGGAAAACCCTCATCACAGCCAAACAATTTTGAGATAAGTTTTTTGCTAAATGAAGAATCCACAATTCCATCTGAAAATGTTACAGAACAAAATGTTCCCTTATCCTGTACACCAACCTATCTTCCACAACAAAATATTTCTTTACCAAATGTATCATCGTCATCTCTTGAACCGATTTTTATCACAGAGGGTGAAAAAAATGAAAATGATGAAAAAGATGAAGACATTTTAATGGATGAATTCATAAAATTCAAAGAACAAGGTGATAATGAAATATTAGCTGAACCTATTGATAAATCGGATATAAAAATGGAGGAAGTTTGCAATAAAGAGGATGAAGAGAATGAAGAAAATGAAACTAATTTCAAAAATTTCTTTAACCAATATCGAGAGTCCCTGAGTTTGCTATATGAAAAACAGTAA
- Protein Sequence
- MNSPKENISTVSRQDIHNFPFPYKLWIAVNSISCEFIKWNIDGTQIQVQLIALDSYLESPMSIFKIKSRSSFESHLRSYAFQLIKTEDMEREDHEAYTSDSTCSRPKYSEILKHFNHMHFLRHRIDLLANIRPTNNISSLATSECVIGEQQTSDINSNQLEGDLCYRRIGSGSSLSKAHFKHQLVLNFLSEVKTLEAKLKASELRSKAKEQEGNDDDTMIELSAELFENPHDSVLYMGDEHRTEYAGYYGNCTNEQVLKFFGPYLPMYENANNDEGEKRIANLNPSGGKPSSQPNNFEISFLLNEESTIPSENVTEQNVPLSCTPTYLPQQNISLPNVSSSSLEPIFITEGEKNENDEKDEDILMDEFIKFKEQGDNEILAEPIDKSDIKMEEVCNKEDEENEENETNFKNFFNQYRESLSLLYEKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -