Basic Information

Gene Symbol
ct
Assembly
GCA_948107695.1
Location
OX403619.1:37497462-37536801[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 1.5e-22 79.7 0.0 3 71 769 838 767 844 0.94
2 3 5.2e-32 6e-28 97.0 0.0 3 77 1210 1285 1208 1287 0.96
3 3 6.9e-31 8e-27 93.4 0.0 3 77 1423 1498 1421 1500 0.96

Sequence Information

Coding Sequence
ATGATAACGATACTTTTGCACACTCGCTCTAGAAGTCGAATGGACCAACATCGTGATGCTGGAGGAAGAAGAGCTACACTGGCTGAAAAAGAAGTCAATACTTTAAAAGAACAATTGTCTACAACTTCTACTGCAACAGTAACAACATCGACGTCATCGACAACAACCACAACAGCGACCTCGATCCATTCATCGCCACCATCTCCATCCTCGGTGAGCACAACTCCAATACCAAATATCAGACTGTCATCACCAACGATAAATAACAACAATAGCTTCAATAATAATAACAAATTAAACAGTGTTGCCATACCACAGCATTTGCATCAGAACGGAAATTTGCTGGCAGCTACACCATCACCGTCTCCGCCATTATCTGAAAACGGTAGCACACTTAACGGATGTATTAATTCGGTAAAATTACTCTTCAATCATAACCAAATAATGGAGACAACACAAGCTGCATCGAATATAACTTCTGAACTTTCTGCGGTATTGACAGCAGCAACCACTAACCCAACTCCCACCAGCGCCACAACTGTCGGTGCAACGTTAACAGACGCTAGCAAACTTATTACGGCAATGACCGCCGAAATGAATCTCCACCAAGACTCCAGTGAATCTGCAACACTGGCAAGCAACCAAATGTCAAATCGATCGCACAGTCCTCTTCTTTCAGCTGTAGAGGGGACTAGTGGCACCGAGGCAACAAGAAacaataataataataataacaataatagtactagtaacaataataataccaatacaaatagtaatagcagtagtagttgtaataataaTTTTGCTGATGAATTGGCTGCCAAAGAAAAAGAGATTAAAGCACTTATCGCTGAGGTTAACCGACTGCAAGCCCTCCACGAAACCCACATTGTACAGATACAAAGACTTGAAGATAATCTAGAGGTGAAACGTCAACACATTCTGAGACTTGAGACTCGTCTACAGACACAACCACAACTTTTCAAAAACTCCGAATCTTCTGCTGCTGCACCCGTAGAATGTCAGGAAGAACTCAAAGATGAGACGGAATTCGTTCCAATCGTTTCTTCTGAGCCATTGGCAATTGAAGAAATGCAAGTAAAAAAGGAAAACCAATTGACATCAACAACAAGTGACATCACTAGTCAGTCAGTGGCGGCTGCAGCTGTAACTGCGGCTGCTGTCAATGACCCAAAACATTTCCAAGAACTTTTCATCGAAAGAACTAAGGCACTGGCTGTCGCAGCTCATGCATCAAGTGAAGCGCTGAAACCCGAAGGAATTTCCAGTGATACAACCGTTGCTGCATCAGACCCAGATACAATCAAGACTTCTGATGACGAGCCTTCGTCGGGCGAAGTTTCTAACAATAACCCAGATGCAAACGTTCAGCATCAGCAGGATTTGCAGGCTCGATGCGAGTCAGCGGCTGTTTCAGAGCAGACTCCGTCGTCAAACTTCCAAAATGTCGACCAGTTTGGTTCGCTGCTTGGCGGTGAATTAGTAAATTCATATTGGCGTCGTGGTTTTGAACATCTGCCATTGGCTCCAACAGCTTCGATGGCCTCGCAACAACCATTGCCAGCAACTACTGCCGCTTCCGCTGCAGTTTCGATAGCAGCACACTCACCACCAACAATGATAACAACTCATTCAACCTCTGAAACGCCAACATCGATATTCCAAAATTTCCCATCAATTCTTTCGTGCCGATCACCTCCACCACTCCCATTGTCGGTCACAGGACCATCAACCACAACTCTTTTGAGTCAACTAGTCAATTCAACATTCTCATCGAATTCAACTCCTTCTCTTCGAACAGATCCTCATTCAACTTCGTCGACCACGACTACCGGATCCCACCTGCAACAACCTCCACTACACCACCACCAACATCTACATCATCAACATTCTACCCTTCAGCATCATCAGCAACAACAACAGCATCACCAGGACTTCGAGAAAGCAGGCAGTCATCACGACTCGTCATCAACAGCAAGCACGCCCAATCTACAAGACCAGCGTTCTAATGATGGGCATATTAATGGATCCAAATCCGCCAAAGCTCAAGAGGATAACAACAACTCATTAGGCTCTCTGGCTCACCTTCCACCTGCATTCCTGCCCGGTTTGCCATTCCAATTCCAAGACCGTGGTCATTTCCGCTTCGCTGAAGACATTCAACTTCCACCTGGAGCCTCTATGGCTGGCCGTCTAGGGGAATCCCTCATTCCTAAAGGCGACCCCATGGAAGCCAAGCTTCAGGAAATGCTCCGTTATAACATGGATAAGTACGCTAATCAAAGTTTGGACACGCTTCACATATCACGACGCGTTCGAGAGTTGCTTTCCGTGCACAACATCGGACAGAGACTTTTCGCCAAGTATATTCTCGGACTATCACAGGGCACAGTGTCCGAATTGCTTTCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTGCTGAAGTCTCTCATACCCAAAAAAGATTCGGGCATTCCTCAATACGGACGAAATGAAGACTCCATGTCAGATGATCGTATTGCACACATTTTAAATGAAGCCTCCAGCCTTATGAAGACTCCTCAGGGACCAGGTTCACAGTTGCAACAGCAAATGAAACACGAATCTCAGCGTCACTTTCAGCAACCCTCTTCATCTCTTGACGATGAACAGagcaatgacgactcaaaatctccgaatgcatcttgtacgtcaccattttataaagactcacctgtgcaacaacagcatcagcatcagcaacagcaacagcagcagcatcagcagcagcagcaacaacaacagcagcaacttcagcaacgccaagaagcccagcgtcgtagtgtgaagcccgatgaaatgtcacaggacaaaatggcgAGAATATACCAGGAAGAGCTTCAAAAACTCATGACTCGCACTCCACGAGATGCATTTCCAAGTTTTTTGTTTCCACACTTCTTAAGTGCGGCTGGTGGTCTACCTCCCGCCAATAGCGCCATTCCACCCGATGACAACATTCGAATGGCTTTGGAAGCCTACCACCGTGAAATGGCGAAGCTGCAGCAGAGCAACAGCGGTAATATACCCAATTTTCCGAATTTCTCAAGCTTGATGGCACTGCAACAACAAGTGCTGAATGGTGCACAGGATCTCTCCGTCCCAAAGGAAAATGAAATCAAAGTTAACGGCCAACGACACTCGCTGGAAAGCTGCGATTCCTCTTCCAATCAAACCAAAGAAACTGCTGAAGAAGCCGCGCATCGTCACTCAAGTGCTTTTAGCTTGGTACGCCTTAAACCGGATTCTGCGCCTGCAAATAGCTCTAATTCCAATCCAAATACCAATTCCGCTGCTCCCAGTCCACTTAGCAATTCCATACTCCCACCGGCTATGGCCACAAGCGAGGACTTCTCTGCAGCTGCCAGTCCACTGCAGAGAATGGCGTCAATTACAAACTCATTGATTACGCAGCCTCCAGTAACGCCTCACCATACGCAGCCGCAAAGACCCACCAAAGCTGTATTACCACCAATTACTCAGCAACAGTTCGATATGTTCAACAATTTGAATACCGAAGATATCGTTCGTCGAGTAAAAGAAGCTCTGTCGCAGTACTCCATTAGCCAGAGATTATTTGGGGAATCCGTTCTAGGGTTGTCACAAGGATCGGTTTCCGATCTTCTCGCCCGACCAAAACCCTGGCATATGCTTACACAAAAAGGCCGTGAGCCATTTATCAGAATGAAAATGTTTTTGGAAGATGAAAACGCTGTACATAAACTGGTAGCTAGCCAATATAAAATAGCCCCCGAAAAATTAATGCGGACTGGTAGTTACAGCGGTAGTCCACAAATACCACAGGGTCTTGCGAACAAAATGAACAGCATTCCCATGCAAAAAATGATGAATGACCTGAAAATGGAGCCACAAGCTCAACACATAATGCAGCAAATGCAAGCAGCTTCCGCAATGGCTGCGGCCGCGGCTGCAGGGCATCTGCAAAATGCTCAACATCAGGGCATGTTGCTAACTACACCTGGACTTCCGCCGCAACATGCAATAAGTCTGCAGCAAGCCGCAGCCAACGAAAAGAAGCCCATGATGATGCCAATCCACTCACCGCACCAAGCAAATGCTATGAGAAGTAGCATGCACCAGCACATGTCACCGACAGTTTACGAAATGGCAGCCCTCACACAAGATTTAGACACGCAGGTTATCACAACAAAAATAAAAGAAGCTCTCCTGGCTAATAATATCGGGCAAAAAATCTTTGGTGAAGCTGTTTTGGGACTGTCTCAAGGATCAGTTTCAGAATTGCTTTCAAAACCAAAACCGTGGCATATGCTGAGTATTAAGGGTCGGGAACCGTTCATTCGTATGCAACTTTGGCTATCGGATGCAAACAATGTTGAACGACTGCAGGTACTTAAAAATGAACGTCGAGAAGCCAGCAAACGTCGTCGATCTACAGGTCCCAATCAGCAAGACAACAGTTCCGATACCAGTAGCAATGACACTGCTGACTTTTACACCAGCAGTCCTGGACCAGGTTCAGTTGGTTCGGTCGGCGCACCACCAAACAAAAAACAACGTGTTCTATTCTCCGAAGAACAAAAAGAAGCTCTCCGCCTCGCTTTTGCTCTGGATCCATATCCAAATGTTGGAACCATTGAGTTTCTGGCTAACGAGTTGGGTCTGGCAACGCGAACTATCACTAACTGGTTCCACAATCATCGAATGCGCCTTAAGCAGCAGGTGCCGCATGGCCAGCCTTCCGAACCAGTTCCTAGTCGAGAAAATACCAACGCAACACCTTTCGATCCAGTCCAATTTCGTATACTATTGAATCAAAGGCTGATGGAACTGCAAAAGGAGCGTATGGGCCTTAATGGCGCCCCCATACCATACCCACCGTATTTTGCTGCAAATCCAAATCTGGCGGCATTAATTGGTCGTGGTTTACTCCCTGGTGGAACTGAACCTGACTTGCAAGCCCTAAATAACGCTTTTAAGGAACAAATGAGTGGCCTCGATCTTTCACTCAAAAGAGAACGAGATGGAGACTACGACGACGATGGCGAAGACGAGTCGCATCTTTCTGACAATGAGTCCATCAATGAAAGTGACGAAAAATCAGAGATGAGTGAAACTCCGAGATCTTCAATGTATGGTTCTATTGGTCAATCACGAACATCAAGACGCAAACCCGCTGCACCGCAATGGGTGAACCCCGATTGGCAAGGCGATGGTAAAACCGGTTTAATGCCTCCAATTGCAGTTTTAGGGGCTGCCGACAAAGAAGTCATAATAAATGGTGTCTGCGTAATGCAACAACAAGCCGCTGACTACAGCCAAAAATCAGGAAACGGTGAAGATGATGAAGAAGGCGCCTCCGATGCCAATGATGAAGAGTCAGCAACCCATCATCGTCAGCAGTCTTCAGACTGCGAAGACGCTCGCACTGAGATCGACCAGAGGTTCATGGAACCCGAAGTTCGAATTAAACAAGAAGAAGACTGTGACACCAACGATAGCCATCAAGATAACTTGGACTTACGAAAACAACAACACCACCATCAGGACGAAGACGACGATACACCAGGTGCATGGAATTATTAG
Protein Sequence
MITILLHTRSRSRMDQHRDAGGRRATLAEKEVNTLKEQLSTTSTATVTTSTSSTTTTTATSIHSSPPSPSSVSTTPIPNIRLSSPTINNNNSFNNNNKLNSVAIPQHLHQNGNLLAATPSPSPPLSENGSTLNGCINSVKLLFNHNQIMETTQAASNITSELSAVLTAATTNPTPTSATTVGATLTDASKLITAMTAEMNLHQDSSESATLASNQMSNRSHSPLLSAVEGTSGTEATRNNNNNNNNNSTSNNNNTNTNSNSSSSCNNNFADELAAKEKEIKALIAEVNRLQALHETHIVQIQRLEDNLEVKRQHILRLETRLQTQPQLFKNSESSAAAPVECQEELKDETEFVPIVSSEPLAIEEMQVKKENQLTSTTSDITSQSVAAAAVTAAAVNDPKHFQELFIERTKALAVAAHASSEALKPEGISSDTTVAASDPDTIKTSDDEPSSGEVSNNNPDANVQHQQDLQARCESAAVSEQTPSSNFQNVDQFGSLLGGELVNSYWRRGFEHLPLAPTASMASQQPLPATTAASAAVSIAAHSPPTMITTHSTSETPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRTDPHSTSSTTTTGSHLQQPPLHHHQHLHHQHSTLQHHQQQQQHHQDFEKAGSHHDSSSTASTPNLQDQRSNDGHINGSKSAKAQEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMKHESQRHFQQPSSSLDDEQSNDDSKSPNASCTSPFYKDSPVQQQHQHQQQQQQQHQQQQQQQQQQLQQRQEAQRRSVKPDEMSQDKMARIYQEELQKLMTRTPRDAFPSFLFPHFLSAAGGLPPANSAIPPDDNIRMALEAYHREMAKLQQSNSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSLESCDSSSNQTKETAEEAAHRHSSAFSLVRLKPDSAPANSSNSNPNTNSAAPSPLSNSILPPAMATSEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQAASAMAAAAAAGHLQNAQHQGMLLTTPGLPPQHAISLQQAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLNGAPIPYPPYFAANPNLAALIGRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSMYGSIGQSRTSRRKPAAPQWVNPDWQGDGKTGLMPPIAVLGAADKEVIINGVCVMQQQAADYSQKSGNGEDDEEGASDANDEESATHHRQQSSDCEDARTEIDQRFMEPEVRIKQEEDCDTNDSHQDNLDLRKQQHHHQDEDDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00665523;
80% Identity
iTF_00984118;