Basic Information

Insect: Melipona quadrifasciata
Gene Symbol: ZNF236
Assembly: GCA_001276565.1
Location: KQ435713.1:78531-85469[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0033 0.28 11.4 2.8 1 23 14 36 14 36 0.97

2 15 0.0013 0.11 12.6 6.7 1 23 127 149 127 149 0.98

3 15 2.1e-05 0.0017 18.3 4.7 1 23 155 177 155 177 0.99

4 15 7e-05 0.0059 16.7 0.8 3 23 185 205 183 205 0.97

5 15 0.00019 0.017 15.3 7.6 1 23 211 233 211 233 0.98

6 15 1.2 99 3.4 1.3 2 23 590 611 589 611 0.94

7 15 0.0019 0.16 12.1 2.7 1 23 617 639 617 639 0.98

8 15 0.004 0.34 11.1 0.8 2 23 646 667 645 667 0.96

9 15 5e-08 4.3e-06 26.6 1.4 2 23 745 766 744 766 0.98

10 15 0.00035 0.03 14.4 3.5 1 23 772 794 772 794 0.99

11 15 4.5e-05 0.0039 17.2 1.9 1 23 800 822 800 822 0.98

12 15 0.0027 0.23 11.7 3.2 1 23 828 850 828 850 0.98

13 15 1.3e-06 0.00011 22.1 0.6 2 23 1076 1097 1075 1097 0.97

14 15 6.5e-06 0.00055 19.9 4.5 1 23 1103 1125 1103 1125 0.98

15 15 1.3e-06 0.00011 22.1 1.1 1 23 1131 1154 1131 1154 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0033	0.28	11.4	2.8	1	23	14	36	14	36	0.97
2	15	0.0013	0.11	12.6	6.7	1	23	127	149	127	149	0.98
3	15	2.1e-05	0.0017	18.3	4.7	1	23	155	177	155	177	0.99
4	15	7e-05	0.0059	16.7	0.8	3	23	185	205	183	205	0.97
5	15	0.00019	0.017	15.3	7.6	1	23	211	233	211	233	0.98
6	15	1.2	99	3.4	1.3	2	23	590	611	589	611	0.94
7	15	0.0019	0.16	12.1	2.7	1	23	617	639	617	639	0.98
8	15	0.004	0.34	11.1	0.8	2	23	646	667	645	667	0.96
9	15	5e-08	4.3e-06	26.6	1.4	2	23	745	766	744	766	0.98
10	15	0.00035	0.03	14.4	3.5	1	23	772	794	772	794	0.99
11	15	4.5e-05	0.0039	17.2	1.9	1	23	800	822	800	822	0.98
12	15	0.0027	0.23	11.7	3.2	1	23	828	850	828	850	0.98
13	15	1.3e-06	0.00011	22.1	0.6	2	23	1076	1097	1075	1097	0.97
14	15	6.5e-06	0.00055	19.9	4.5	1	23	1103	1125	1103	1125	0.98
15	15	1.3e-06	0.00011	22.1	1.1	1	23	1131	1154	1131	1154	0.97

Sequence Information

Coding Sequence: ATGATAGCACACGAACGCACGCATTCGAACGTCAAACGTTACGCTTGCGGTTCTTGCGACAAAACATTCGTGTGTCATAGTAGTTTAATTGCCCATACCAGATCGCATGCAAAGtctgaaaattgtttcgataaaACCATTGACAACGAGAAGGATTCCGACACGCACGTTACGATCGAAACTGATATTTATTCTGCTAATCAGTCGAAAACCCAAACAAAGGGTAAGCCAAAATTATCACCGGAAGCAGAAAGTCTAGTACCTCAGGTGATCTTGCAAGAACCGTTAGTAATTAGCGAcactggaaataaaatttccgtgGCCCCTtcgggaaagaagaaacgtgcTTGTGACGCAGCTGCTGATCAGGCCAGGCCGCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAGATCAGCCATTTGAAGCAACATCATCGCCGTCATACAGGAGAGCGTCCGTACACATGCACAAAATGCGATAGGAGATTCACATCGAACAGCGTTCTAAAATCGCATTTGCATACTCACGAGGATTCGAGACCATACGGTTGTTCTGTTTGTAATGCGAAATTCTCTACGCAGAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACatgaaaatacataaacaCGAATTGGCACAGCGGCAATTGGAACAACAGAAAATGAGAATACAAGAACAAGCTTCGGACAAGTTGAATACGAAGGAAAGTTCTAAACAAGAAGCGGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTACTATTAATTCCACCATTACCACCAACATTTCTATCACAACCACCGCCAGCATCAACACCACTTCTCCCATCGTCACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGATCAGAGTTTTCACAAGctttttctgaatttcaaaacattaccgaagaaaaagaaaagataaggCCAGTTTTACCAACAAATTGCGATGCCACAGCATTTATTAATCGAATAGCTGTAACGAATCTCGAAAATTCACCAATATTACAGGCCGATGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTGACACCGGAAAGTATACGAGAAATAGAAGAAACTTTAAATCaacagttttttaatatcggAATGAACTTTAACTTGGGAGGAAGTAATCACTCGAGACATTCAGACGGTGCAAACACGAATGATTTTGGCCATATGAAAGAACAGCAGCAGCCTGtgttaaatTCGGATGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACTAGCATGGCGAGTATACTACCTAGTAATATGAAAGATGAACATCGACTCTCTGTTTGCGTTGCGACACCAGATGACATAAACGTTGAACAATCAGAAAAGTCTGGCGTGCAAGCGGTGGTATTTGTTTCTCagtcaaatttttccaagaagGAAAACGTAACGAACGAATTCGCTGTAGAGGAAACtcaaaaaaacaatattcagAAAGAATGTACAATCAATCAAATCTTTTTTACAGAAGACATTCGGGGAACGGCGCAAGATTTGAAGGTTCAATCAAATATGCACGCTTTGTCATCCAATGTTGCGGAAATCGTTGAAACCGCTACGAGTAAAATATCCTGTGAGCAATCGCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAGTTGGTTTaaagGAACATTTGACAAGTCACCGTGGAACGAAGGAGTATCAGTGTACAGAGTGctcttcgaaatttcatacGAACGGTGGATTGAATAGACATTCGAAGATTCATGTCGTTAAACAATCACTTAAATGTTCGTCGTGCGAGGAGCAGTTTAACAATAGAGTCGAACTGCGATCgcataataaaattcatgaaaCTTCAATGTGGAACGCTTCAGGGACAAATGCAGATAATTCGGTGCTTTCATTGGCAATGCATCAGTCACGGGTCGTAAATGGTCATTCGCCAACAAATAGTATCGTGATAGAATCTGATTCTACCGTTTCGGAAAAAGTTTTGCTGGATACAGTGGCTGAAAGAGAAGTAATGAATCAAGTAGAAAATATATTCGcggggaaaaaggaacgaaaagagTATACGAATAAATGCAAGTATTGCCCAAAAACTTTTCGCAAACCGAGTGATCTTATAAGACATGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAGTAAAAGTTTCGCCGTAAAATGTACTCTGGATTCTCATACAAAAGTTCATACGGGTAAAAAGACATTTCGTTGTCATGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTTTGCATACGGGTTCGAAACCATTCAGATGTCTTATTTGCGATTCGAGATTTCGAACATCCGGCCATAGAAAGGTACACTTGTTGAAACACGCACGCGAGCACAAAGACAacgcaaaaagaaaacaaaaacatttaaaGGTTGCGGTCATAGCAGAAGTGGCGGCTGATCTTGAGAAATGTAAtgagaaggaaaggaaaatggaCAGTTTCGAGGAAAAGCAGCAACTAGCGCAAGAAGAGGAGCAACAGCAGCTTTCGCAGACGGTCGCAGGATTAACGTCTCATTTAGAGACATATAGTATTGAAGCAGCGACTTCCTGTTTAACcgatcaaattaatttcgacgcgGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTGGTtacgaatttacattttcttttgacAAATGGCCTCGTTACCATTCAAACCGAAGAATCATTATTGTCGCAAACGTCCGCATCCTCGGTTAACAATTCGCATCATCGATCAGTCGGGGTTCCCGATGCTGGATGTGCATTGTTATCAACGTCCAGTGTTGTACCCGATACTAACGAGCAGCATGCCAAGGAAGAGATTCATATAGAACAAATGTTGAAAACGCCATCGAACAATTGCCTTTTAACGGTATCGACTGTGACACCGCCGCGATTAGAACAATGTTCAAAGGTGACTACGGAAGGGACTACGTTGTCAGTAGCCGATAAATCGACGGTTAAAAGAAATCTGTCGAAAAAGGAGTGCGACATTTGTGGGAAAACATTCACGAAACCGTATCAAGTCGAAAGGCATAAACGAATTCATACGGGTGAACGACCGTACAAGTGTGACCTGTGTACGAAATCATTTGCTCAAAAATCAACTCTACAGATGCATCAAAAACATCATACCGGCGATCGGCCATACGCTTGCTCGTATTGTGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACGCATGTGAAACGCGTTCATCAATTGGACACCGTGGACGCTAAGAAGTGGAAGCGCGGCCGTCAATCCTTTCTGTCGAAAACatcttttcaagaaaacaCTATCGAAGATAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTTCTGAAATAG
Protein Sequence: MIAHERTHSNVKRYACGSCDKTFVCHSSLIAHTRSHAKSENCFDKTIDNEKDSDTHVTIETDIYSANQSKTQTKGKPKLSPEAESLVPQVILQEPLVISDTGNKISVAPSGKKKRACDAAADQARPHKCWICQAAFRKISHLKQHHRRHTGERPYTCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTKESSKQEAALESSSSSSVSVTTINSTITTNISITTTASINTTSPIVTTSSSTFSDNLALSRLGSVELSFQPQLGSEFSQAFSEFQNITEEKEKIRPVLPTNCDATAFINRIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSNHSRHSDGANTNDFGHMKEQQQPVLNSDGEIDIGLDTRNSTSMASILPSNMKDEHRLSVCVATPDDINVEQSEKSGVQAVVFVSQSNFSKKENVTNEFAVEETQKNNIQKECTINQIFFTEDIRGTAQDLKVQSNMHALSSNVAEIVETATSKISCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFHTNGGLNRHSKIHVVKQSLKCSSCEEQFNNRVELRSHNKIHETSMWNASGTNADNSVLSLAMHQSRVVNGHSPTNSIVIESDSTVSEKVLLDTVAEREVMNQVENIFAGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCLICDSRFRTSGHRKVHLLKHAREHKDNAKRKQKHLKVAVIAEVAADLEKCNEKERKMDSFEEKQQLAQEEEQQQLSQTVAGLTSHLETYSIEAATSCLTDQINFDAEGIVSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSASSVNNSHHRSVGVPDAGCALLSTSSVVPDTNEQHAKEEIHIEQMLKTPSNNCLLTVSTVTPPRLEQCSKVTTEGTTLSVADKSTVKRNLSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDAKKWKRGRQSFLSKTSFQENTIEDKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -