Mqua002503.1
Basic Information
- Insect
- Melipona quadrifasciata
- Gene Symbol
- bab1
- Assembly
- GCA_001276565.1
- Location
- KQ435724.1:2797071-2982801[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-11 4.8e-08 32.2 0.0 2 35 403 437 402 445 0.89 2 3 1.9e-17 3.3e-14 52.0 0.0 1 43 592 635 592 637 0.95 3 3 5.8 1e+04 -4.0 1.8 6 15 715 724 714 725 0.89
Sequence Information
- Coding Sequence
- ATGGAGGTGGAGGTAGAtgtggaggtggaggtggaggtggaggcggtggcggtggcggtggcggtggcggtggcggtggcggtaGCGGTagcgaacgaagagagaagagaagagaagggcAAGGGAACGGAAcagaacggaacggaacggaaggGAAGGaagctTTCatacAAACGACCAAATTATCTAAATACGACAAATAGATATACAACAATTACTAACGTAATAACGTGTAgtaatatacagtccacattGTCGCCCTCGTCCGGCAAAAATTTTCCAGAATGGAATTTTGCACCTTTGCgggaaatgaaattccatCCCACGTGCAAGGATGAATTTATTGGATACGCTTGGGAAGCCGAAAAGGTTGGAATTGGTGAGCAAGCTTTATTATGGAAAAACATCTTTGTTTGCAATCTTAGGTTATGtgttttctttaaagaaattacGGTTGAAGATGGTGGTCAGaaatCGTTACCATGGAAGAAGGTGATATCTTATTTACGCGGACTGTTGCGGCACTGGCAACATTTGGCTCGGCTGATTGTGAGTAATAAACCGTCCgacggtggtggtggttgtggtggtggtggtggtggtggtggtggtggtggtggtggtagtagtggtaggATGGGGAAGAAGCAAGAGGCGTCGCACGGCCGACGCCAGAGAGCGGACAAACGGGGACAAAGAGGtGATTATTTTGATTCTGATAATAATGACATTATCCTAgatcaaaatgtaaaaaggcAAGAAAACTTTAATTCGATAATTCCAGTGATAGCGAGGAGGATAAAATTAAGTTGTTCTTATGGTATAAATTATCGCTGCAAAATCACTATGACTGGCGTGGTAGTTCTCCGTAGCAGTGCTAATGATCCGCCGTCAATTTTCGGAGAGAACTTGGGCTTTTACGTGGTTTCAAATGAACGTGTGAATGTAAAGAAAGTCGgtggtacaataaaattggCGTTAATGGAGAGACATGAAACAGCATCCTCGGACTTGGAGAAATCTCTAGAAGGAACGAGGATGCTTCCTCAAataaatgaaattattgatttttttgaaaagactAGTTATTTCGTTTTAACTTATGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCAGCTGACTATTCGACCCTGCTGAAGCTGAAGGCGCCCACGTGGACGCGGCACGATCTCCAGGAGGCGATCGAGGCGGTGGTCACGCAGAAGATGCGCTTCACCCAGGCGTCCACGAAATACGGAATACCGAAAGGCACACTGTACGACAACATCCTGGGAAAGACGAAGAGAATGATGGTCCTGGAGGAAGCGGGGCTGAACTCGAGCGAGGAGACCGCCGTCCTCGAGTTCTGCTGCGACATCAGCGTCAGCCCGTACAACCGCCGCACGAAAAAGTCCCTGAACGCGATCCTCAACTTCGTGGAGAAGCTCAGGCGGACACGCGACCCGAACTTTGTGTTTAACGGCCTCGCCGGCTTCCGTTGGTGGTGGGCATTCTGTAAAAAGCACTCGATCGTGTCGCTCTACTTCAacgacgagaacgagaacgatcATTCCCCGATAAAGTCGAAAGATGAACACGCTACCTCGCCACGACGATTGTTGTTCCGTTTGGGGAACGAGCGCAAAGCCGATTTAGCGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGCTTTCGAGAGCGCGGCCCGCTCAAGTCCTGGCGACCGGAGACCATGGCCGAGGCGATCTTCAGCGTCCTGAAGGAAGGGCTGTCCCTGAGTCAAGCGGCAAGGAAATACGACATCCCGTACCCGACCTTCGTCTTGTATGCCAATCGAGTGCATAATATGCTGGGTCCGAGTGCCGACGGCGGAGCAGATCTTCGTCCAAAGGGCAGAGGCAGACCGCAAAGGATCCTGCTGGGTGTTTGGCCGGACGAGCACATTCGCGGTGTGATTCGGGCGGTGGTGTTCCGCGACGGGCATTCGCCGCATATGGTGAAGGAAGAGCCAACTTCGATGTACCCGAGTTTGGCAAATTACGCGGCGTGCAACGGCCCCGAAGGCGCGGTCAGCCCCGGAGCGGCAGCCGCGGCCGCGGTTGCTGCGGTCGCTCAAGGGCTGCGGCATCAGATGTGCAGCATGGTGGCGGCGGCGCACTCGCAACAGCACGACATGATGGCGACCAACCTGTCGACGAACCTGTCAGCGAACCTGTCGACCAGCCTCTCGTCGAATCTGCAGGCAGCCATGCAGGCCAGCCAGCATCAtcacaacagcaacaacagcggGCCGGTGATCGGCAGCAACAACGGTAGCGGCGTCATGGGCGGTGGAAACAGCGGCAACTCGCCGTTGAATCTCGGCCTGGCCAGCCCGGGATCCGGCGGCCCGCCAGAGAGCCCGATGGAGAGCCCGTTGGCGAGCCCGCTCGGCCCTCTCATGGACCCTGGACACATACCCAGCAGCGTGGAGGTCGGCATCGGCGTCAGCGGCATGACGTACAAGCCCGCGCGGAGCTTCGTCAGCCCGCGGCCGGAGAATCTCTTCCAGGAGGACATCGCGGATCTCGTCAAGAGCCCCCACGGGCTCAAGGACAAGGACAAGATACCCGTCAAGCTGGAGCCGCTGACGGACTCGCGTTGCGAATATAACGAGATCGACCCGACATACGCGCCACACTTGTTCCACACGGAAGGGAGAGAACACCGGAAAGAAAATGCAAGCAGACAGACCaaaacgCCCGACATATGTATGTGTACCCGTGACGAATCGCGAAGCGACGTTTGTTTCCGTTTTCTTCCCAACACCTCGAACAACGAGGCTTTggaaatacatacataa
- Protein Sequence
- MEVEVDVEVEVEVEAVAVAVAVAVAVAVAVANEERREEKGKGTEQNGTERKGRKLSYKRPNYLNTTNRYTTITNVITCSNIQSTLSPSSGKNFPEWNFAPLREMKFHPTCKDEFIGYAWEAEKVGIGEQALLWKNIFVCNLRLCVFFKEITVEDGGQKSLPWKKVISYLRGLLRHWQHLARLIVSNKPSDGGGGCGGGGGGGGGGGGGSSGRMGKKQEASHGRRQRADKRGQRGDYFDSDNNDIILDQNVKRQENFNSIIPVIARRIKLSCSYGINYRCKITMTGVVVLRSSANDPPSIFGENLGFYVVSNERVNVKKVGGTIKLALMERHETASSDLEKSLEGTRMLPQINEIIDFFEKTSYFVLTYAKLLESSHAWLGASTSSIAADYSTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKTKRMMVLEEAGLNSSEETAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRTRDPNFVFNGLAGFRWWWAFCKKHSIVSLYFNDENENDHSPIKSKDEHATSPRRLLFRLGNERKADLALQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEEPTSMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSANLSTSLSSNLQAAMQASQHHHNSNNSGPVIGSNNGSGVMGGGNSGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCEYNEIDPTYAPHLFHTEGREHRKENASRQTKTPDICMCTRDESRSDVCFRFLPNTSNNEALEIHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -