Basic Information

Insect: Melipona bicolor
Gene Symbol: zld
Assembly: GCA_030673865.1
Location: JAHYIQ010000011.1:2795456-2798758[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.024 2.6 9.2 5.3 1 23 28 50 28 51 0.94

2 7 0.0063 0.7 11.0 0.0 2 23 226 248 225 248 0.94

3 7 0.0026 0.28 12.3 2.9 1 23 465 489 465 489 0.92

4 7 0.13 14 7.0 6.2 1 23 981 1004 981 1004 0.93

5 7 0.37 41 5.5 5.1 1 12 1010 1021 1010 1033 0.75

6 7 3.8e-06 0.00042 21.2 5.6 1 23 1038 1060 1038 1060 0.98

7 7 1.1e-06 0.00012 22.9 0.8 1 23 1066 1088 1066 1088 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.024	2.6	9.2	5.3	1	23	28	50	28	51	0.94
2	7	0.0063	0.7	11.0	0.0	2	23	226	248	225	248	0.94
3	7	0.0026	0.28	12.3	2.9	1	23	465	489	465	489	0.92
4	7	0.13	14	7.0	6.2	1	23	981	1004	981	1004	0.93
5	7	0.37	41	5.5	5.1	1	12	1010	1021	1010	1033	0.75
6	7	3.8e-06	0.00042	21.2	5.6	1	23	1038	1060	1038	1060	0.98
7	7	1.1e-06	0.00012	22.9	0.8	1	23	1066	1088	1066	1088	0.98

Sequence Information

Coding Sequence: ATGAGTGAAATGAGTGTCGAGCAACAAcggcaacagcaacaacaacaacaacagtaCGTAGGTGGCAGTTCGAATCTGGAGCATCATTGCAAGGACTGCGACGTTTACTTCGAAAGCGATAAGAGTCTTGAAGTGCACCTGCGATACCACCACGAGAACCTGCTAAGCCAGTGGGcgagtcaagctcaacaggaAGAGagtaacaacaacaacagtaAGGCCGGCAATCACAACAGTCACGTGGGCGTTAAGCGCGATAGTGTAACCGCGCCAGCGGACTCGAGTGAAACTACCTCCTCGAGGTCGCCCTCGCAAGATCCAACGTCATCGTCTCAACAACCATCCacgcagcagcagcaacagccgtcgcaacaacaacaacaggctcaacagcaacagcaacaagctcaacaacaacaacagcagcagcagcagcagcagcaacagccaACTGGAGCTCAAACTTACAATCAATTCCAGCCGTCAATGTTCGGTGAAACAAGTTACTTCATGCAGAACGATCAGGCCTACATGATGCCCCATCACTATTCACCGCCGCACGAAGATAACGGCGGTGTGAGTTACTCGCGTTACCATCCGTACCAACATCAACAACACTTCGCACCGGATCGTACGAGTTCAGTGAGTTCGACCAGTCCGAGGAGTCCGCACCTACAGTGCGACAAGTGCGGTGCAGTGTACGAAAACGCGAATCAGCTGGGTGAACACGTAAGGGCGAATCACTCGAATTCACCCGGTGGATATCCAGGACAGCATCAATATCAGCAGCTGGGTAGCAGCCCGCAACAACAGAGTCAGCAGCAACAGATGCACGCGTCACCGCCGCAGTCTAgccagcagcagcaacaacagcagccTGGCTACGACTACAATGGCGGGCAACCGGTGGAAATTGAGGCGAAACAGGAACCGGACGAACAGGCGGAAATTTTAGACCTGGATTCGCACAAGGTACAGACTCACAGATACGAGGAAGAGCTGATGCGGATTCATCACCAGCAGCAGCAAGAGCTGCATATGCAGATTCATCAGCAGCAAGTGATGCAGCAACATCAGCAACAGCAACGGTCCGGAACGCATTCGGTGAGTTCCATGCTGGGTTGGCCACCGGCTGCGCAGCACGACTACCATCCCGGTTTGTCGCCAATGGGCCCGTTGGACGGTGTTTCATCTCTCTCCGATCAGGGCCAATTCATGCGGGGGCAGCACATGCCTGTCGAACCACAACGACATCCAGGCTCCCCAATCATTACGAGCACGCAGCCGATACCGGGTCACCAAATGCCTGGTGGTCTTTTGCAACAACCACCGAAACCTCCACCTTTGGCTAATCAATCGTGGAAAAGTAACGAGGCGCGGCGGCCAAAGACCTATAACTGCACTGCGTGCAACAAGTGGTTCACCAGCTCGGGCCATTTGAAGAGGCACTATAACACGACGCTACATAAGAACGCGGTGAAACAGAGCAATCAGCCGGATCCAGCCAATTTGCCGATCAGCGCTCATCATCATCCTGGTAGAGATAGCCATTCTGGTGGCAGAGGCGGAGGACCATCTAGATCGCCGGAGTTATCTTCTTCCGGGAGTCCCCCAAACTTGATGGCAGGTCCCTCGGGCGAGGCGGCGAGGGGCCTGCTCCACACGCCCACCACTCTCtacaacagcagcaacagcaacaacaacaacaattccaacaacagcaacagcagcagcagcagcgaaTCTTCGGCGGTAGCGGCGGCTCTAACGCAACCATCGCCTACGGCGGCCCACTTGGCCTCCACAATGGTACCGCCGCTCAATTCTCCGGTGGAATCACCGCTGGCGGGTCATCATCAACATCAAATGAGTTCATTGTCCCCTCAGCTGAGCCACCAACACCAACACCAACACCAACACCAAcaccagcagcagcagcagcaaccgcagcagcagcagcagcagcaacttCATCACCTATCAATGGGTTCGCCACCGGGCCAACTTCCTGTCCACCCCATGAATTCACCCATGTCACCCATGTCACCCATGCACCCACCGCCGGCGCCCCACCTGAATTCGCCTTCGTCAATGGGCCCATCCCACCCACACCATCACATGAATTCTCCATCTCCCATAACGCCGGGCTCGGTCCACCCAGCAATGGCTTCGCCCACGGCGATGGGGGGTACTACGATGCCTCATCAGCCGTACCCAAACGCCTTGCCCCCCCACGTTATACCTACTACCAACATCCCGGGACTGCTGGAGTCTATCACCATCCAACTAACTACTACTGGTAATGATTTGGGTTTTTTATACGGAGACTCTCAACATCAGCATCACGATCAACAGCAGCAGCACCAGCACCAGCaccagcagcaacaacaagaacagcaacaacagcTGCAATGTCTGGATGTGTTACCCGGTTTTGGGACCTTTAGCAACCATCATCAAAGGCCTCTGCCGTGTTTCACTCAATTCAACGTAGCCGGGTTTTTTATCGGCCAGAATCAATTGGAGGCCGTAAACGTGGGGGGGCTAAGTCCAGAGGAGAACGTATCTCCTCAGAATCGATCGTTCGACTCGTCCAGATCCAACTACGTTCCATACAGAAACTCACCGCCTCGATACGAATCCCTTGCCAACATGGACGTGAACATGCAGCCAAACACCGACGGTATGATCATCAAACAGTATGAGATTCAAACCCATCAAAATAATCAGCATCTGTTATACCCGCTCCAGCAGTCTCAGGAGAATCTCGAGGCGAACAACAATCTGCCGCAACTGATGCACGTGAAGAGTGAATCGAGTCCGAACCAAGGCGGCAAATCGTCGAAGAAGTATTCGAAATCGAAACGCATTTCTGTGATCACTAAGGAGCATCAGGTGACAAGTACCAACGGCTCGAACTTCATTTCCAAGAACGGCTTGCACAAGTGCATCGAGTGCGACAAGGTCTTCAACAAGTCTTGCTACCTGACGCAACATAACAAGAGCTTCCACTCTGGCGACAAGCCGTTCAAATGCAATCAGTGCGGCAAGAGGTTCCGCTTCGATTACGTGCACGCGGAGCACCTGCAGAAGCACGCCGGTGACAAGCCGTACAAGTGCGAGATATGTCCGAAGCAGTTCAACCACAAAACTGACCTCAGACGGCACATGTGCCTCCACACTGGCGAAAAGCCGTACGCCTGTGATATTTGCGGCAAGGGATTCATCAGAAAGGACCATATGATGAAGCATCTCGAGACGcacaagaaaaagaacaacTACAACGTCCATCTGAGGACGTGA
Protein Sequence: MSEMSVEQQRQQQQQQQQYVGGSSNLEHHCKDCDVYFESDKSLEVHLRYHHENLLSQWASQAQQEESNNNNSKAGNHNSHVGVKRDSVTAPADSSETTSSRSPSQDPTSSSQQPSTQQQQQPSQQQQQAQQQQQQAQQQQQQQQQQQQQPTGAQTYNQFQPSMFGETSYFMQNDQAYMMPHHYSPPHEDNGGVSYSRYHPYQHQQHFAPDRTSSVSSTSPRSPHLQCDKCGAVYENANQLGEHVRANHSNSPGGYPGQHQYQQLGSSPQQQSQQQQMHASPPQSSQQQQQQQPGYDYNGGQPVEIEAKQEPDEQAEILDLDSHKVQTHRYEEELMRIHHQQQQELHMQIHQQQVMQQHQQQQRSGTHSVSSMLGWPPAAQHDYHPGLSPMGPLDGVSSLSDQGQFMRGQHMPVEPQRHPGSPIITSTQPIPGHQMPGGLLQQPPKPPPLANQSWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKQSNQPDPANLPISAHHHPGRDSHSGGRGGGPSRSPELSSSGSPPNLMAGPSGEAARGLLHTPTTLYNSSNSNNNNNSNNSNSSSSSESSAVAAALTQPSPTAAHLASTMVPPLNSPVESPLAGHHQHQMSSLSPQLSHQHQHQHQHQHQQQQQQPQQQQQQQLHHLSMGSPPGQLPVHPMNSPMSPMSPMHPPPAPHLNSPSSMGPSHPHHHMNSPSPITPGSVHPAMASPTAMGGTTMPHQPYPNALPPHVIPTTNIPGLLESITIQLTTTGNDLGFLYGDSQHQHHDQQQQHQHQHQQQQQEQQQQLQCLDVLPGFGTFSNHHQRPLPCFTQFNVAGFFIGQNQLEAVNVGGLSPEENVSPQNRSFDSSRSNYVPYRNSPPRYESLANMDVNMQPNTDGMIIKQYEIQTHQNNQHLLYPLQQSQENLEANNNLPQLMHVKSESSPNQGGKSSKKYSKSKRISVITKEHQVTSTNGSNFISKNGLHKCIECDKVFNKSCYLTQHNKSFHSGDKPFKCNQCGKRFRFDYVHAEHLQKHAGDKPYKCEICPKQFNHKTDLRRHMCLHTGEKPYACDICGKGFIRKDHMMKHLETHKKKNNYNVHLRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417956;
90% Identity: iTF_00983843; iTF_00982560;
80% Identity: -