Mbee007286.1
Basic Information
- Insect
- Melipona beecheii
- Gene Symbol
- nfxl1
- Assembly
- GCA_032399605.1
- Location
- JAUCMO010000291.1:10606642-10609400[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.6 1e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.22 1.4e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 18 8.3e-08 0.00054 20.0 15.1 1 18 175 191 175 192 0.98 4 18 4.4e-06 0.029 14.5 13.8 1 19 229 246 229 246 0.94 5 18 0.43 2.8e+03 -1.4 0.3 5 10 270 275 270 277 0.90 6 18 0.0038 25 5.1 8.0 1 19 281 300 281 300 0.91 7 18 6.2e-05 0.4 10.9 9.2 1 18 336 353 336 354 0.97 8 18 0.0021 14 6.0 8.3 1 12 388 399 388 399 0.94 9 18 0.7 4.6e+03 -2.1 1.0 6 10 409 413 408 413 0.92 10 18 2.9e-08 0.00019 21.5 10.0 1 18 419 436 419 437 0.92 11 18 0.00066 4.3 7.6 7.1 9 19 484 494 482 494 0.90 12 18 0.0038 25 5.2 6.2 1 12 504 514 504 514 0.95 13 18 0.94 6.1e+03 -2.5 5.8 14 19 546 551 546 551 0.90 14 18 0.0056 36 4.6 8.6 1 12 587 598 577 598 0.80 15 18 1.1 6.9e+03 -2.7 0.8 6 10 614 618 613 618 0.86 16 18 0.005 33 4.8 14.9 3 19 627 643 626 643 0.93 17 18 2e-05 0.13 12.5 11.3 1 16 688 702 688 708 0.86 18 18 1.1 7.1e+03 -2.7 0.4 5 10 737 742 737 742 0.92
Sequence Information
- Coding Sequence
- atgcagaaattcAAACGAGTTCAAGCAGAAAATAAACTAACAATTAGCAAGCATTTAGAAGCAAATGCCCATTTGGAATCCTCCAGTGAGGATGAAAATGACAGAGGCGAGGAGAATATGCAAAATGTTATTGGAAAGATACTGTCCGCCTATCAAGGCGAGGAGACAGATGCAGAAAAGATTTTGtcatatttgattaatatctTCCAATCTGGCAATGCTGTTTGTTTAATATGTATCTCGACTGTGAAAAAAGCAGATCCGATTTGGAATTGCAACAAATGTTTTGCTTTTCTACATCTGTCTTGCATTTCGCGTTGGATACAGGATAGCGTGAATGTTAAACGTGAAAAGGGTATCGAGCCAACATGGGCGtgtcCAAAATGTCGTATGGAATATAAGGAAGATGACAGTCCTCGTAAATATACGTGCTTCTGCAAAAAAACCACAGATCCTCCATATAATCCATGGAACATCCCGCATTCCTGTGGAGAGACATGCGACAAACTGTTGCAACCAGAGTGCGGCCATAAATGTGTTTTACTTTGCCATCCTGGGCCATGTCCTCCCTGTGCAAAGACAGTATCCATTAAATGCTACTGTGGCAAACAGGCACCACAACAACGACGATGCAATACCAAAAATTGGAGCTGCGGTGCTATATGCAACAAAAAGTATGAATCATGTTCGCACACTTGCAAGGAAGTGTGTCATTCAGAAAAGTGTCCACCTTGTTCAGAGATATTGTCGCTAGAATGCCATTGCAAGAGTAACAAGGAATTAAAGCGATGTTCAAAAGGTCCATGGACGTGCGACAAACCTTGTGGCAGACCTTTCTCATGCAATGTTCACATCTGTGAAAGTAAATGTCATTTAGACGACGACTGCAGAACCTGTCCACTAGAGAAGAACAGAACATGCCCATGTGGAAAGAAACGTTACTCCGTTTCATGCAACCAGGAACAATTACCAACGTGCGGAGACACATGTGGAAAGTTATTGAATTGCGGCTCGCATTACTGCAATATGAGATGTCATACAGATCGTTGTGGACAGTGTTTGGAAGTAATCACAAAGTCGTGTAGATGCGGCAGCTACAAAAAGGAGGTCGCTTGTGGCAAAGAATTCCATTGCAACAAGAAATGCGTACAGATGCGTCTGTGCGGAAGGCATTCGTGTAACAAAAAATGCTGTGACTGTTTGATCAAGAATACGTACAACGCTTGCGAGAAGGTGTGCGACAACACTCTAAATTGTCGCAAGCACAAATGTGCCGCTCTTTGTCACAGCGGTCCCTGTTACCCGTGCGCACGAACCGACGTTATTCAATGTAGATGCGGACACAACAAGATAACGGTGCCGTGTGGTACGAAAAGAGTTAAGCCGCCACCTTGCAACAGACAGTGCAAAATACCGCCGATCTGCCATCACTCCAAACGAGAAACTCATAAATGTCACCAAGGCTACTGTCCGCCCTGCAAAAAGATATGTGGCTTGGTATACAAACGATGTGGCCATTCTTGTGTCGCTGTTTGTCATACAAAAGTTTGGATGAAGGTAGGCAAAAGTGACGTGAAGGTACAACCAGCAGGGCCGTGGGACATTCAGAAGGAAACTATGCAGCTGAAAACGTTGCCATGTCCGCCGTGTAAAGTCTCTGTGTCAGTTACATGCTTAGGAGGACACGAGACACTATCATGGGCCTGTCACGAGGCCAAGCCTACCTCCTGTGGGAGATTGTGTGGAAGAACGTTACCATGCAAAAATCACAAGTGCGAATTGATTTGTCATAAAGTACCGTCTTCCGAAGAAACTAAGAATGGCACTCCGTGTATGGATTGTGAGAGTCCCTGTCTACTTCCACGGCCGGCAGGTTGCATGCATTTATGCCCCAAACTTTGTCATCCCCCGCCGTGTAATCCCTGCAAACAAATAGTTAAAACTTCGTGTCATTGCGGCATAAGTACCATATATCGTAGATGCTTCGAATTAACGTCGGCCACAGTTGAGAAACGCAATGAATTGCTCAAGTGCGGGAATCAGTGCCCGAAAAATTATCCATGTGGACATCGATGCGCCAACGAGTGTCACCTAGGGCCGTGCAAAAACGAGAAGGAGTGCAGCAAGAAGATGAAATTGTTTTGCGAGTGCAGACGGATTAAGAAAGAGTTTGTTTGTTCCGTGGTACAAAAGGAGGGAATTTCGATAAAGTGTGACGATGTTTGCATGAGACTGAAGAACGAAAGACGTCAGGCCGAAGCTGCCTTGCTGGAGCAGAAACGGCGAGCGGAGGAGATGCGCAATCAACAAGAGATAGAGAAGTTCGAGCGAAAATTCAAACCCCGTCGTAAGGGGAAAGACAAGTCCGACAAAAAACCGTCACAGAACGAGACTCGCGGTAACTACGAGAGATATTGGATTTTAGGCGTCTTGATATGTTTAATAAgcgttgtaatattttatgcaacCATCGGACagtcgtga
- Protein Sequence
- MQKFKRVQAENKLTISKHLEANAHLESSSEDENDRGEENMQNVIGKILSAYQGEETDAEKILSYLINIFQSGNAVCLICISTVKKADPIWNCNKCFAFLHLSCISRWIQDSVNVKREKGIEPTWACPKCRMEYKEDDSPRKYTCFCKKTTDPPYNPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQAPQQRRCNTKNWSCGAICNKKYESCSHTCKEVCHSEKCPPCSEILSLECHCKSNKELKRCSKGPWTCDKPCGRPFSCNVHICESKCHLDDDCRTCPLEKNRTCPCGKKRYSVSCNQEQLPTCGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVITKSCRCGSYKKEVACGKEFHCNKKCVQMRLCGRHSCNKKCCDCLIKNTYNACEKVCDNTLNCRKHKCAALCHSGPCYPCARTDVIQCRCGHNKITVPCGTKRVKPPPCNRQCKIPPICHHSKRETHKCHQGYCPPCKKICGLVYKRCGHSCVAVCHTKVWMKVGKSDVKVQPAGPWDIQKETMQLKTLPCPPCKVSVSVTCLGGHETLSWACHEAKPTSCGRLCGRTLPCKNHKCELICHKVPSSEETKNGTPCMDCESPCLLPRPAGCMHLCPKLCHPPPCNPCKQIVKTSCHCGISTIYRRCFELTSATVEKRNELLKCGNQCPKNYPCGHRCANECHLGPCKNEKECSKKMKLFCECRRIKKEFVCSVVQKEGISIKCDDVCMRLKNERRQAEAALLEQKRRAEEMRNQQEIEKFERKFKPRRKGKDKSDKKPSQNETRGNYERYWILGVLICLISVVIFYATIGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00983909;
- 90% Identity
- iTF_01420631;
- 80% Identity
- -