Basic Information

Insect: Melipona beecheii
Gene Symbol: -
Assembly: GCA_032399605.1
Location: JAUCMO010000243.1:5824985-5829185[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 4.9 1.2e+04 -3.5 0.1 17 22 12 17 6 18 0.80

2 19 4.9 1.2e+04 -3.5 7.3 11 43 240 267 233 268 0.76

3 19 1.6 4e+03 -1.9 0.3 15 39 386 407 382 410 0.64

4 19 0.5 1.2e+03 -0.3 0.4 18 38 468 485 463 485 0.82

5 19 0.39 9.6e+02 0.0 2.2 14 27 497 510 492 524 0.71

6 19 2.1 5.2e+03 -2.3 0.5 12 27 523 538 510 546 0.72

7 19 4.5 1.1e+04 -3.4 0.0 13 27 592 606 589 613 0.75

8 19 3.5 8.5e+03 -3.0 0.1 15 28 622 635 614 638 0.76

9 19 4e-07 0.00099 19.2 0.5 14 44 686 713 681 713 0.91

10 19 2.4 5.9e+03 -2.5 4.4 17 30 719 734 714 756 0.74

11 19 0.58 1.4e+03 -0.5 0.4 13 26 746 759 736 762 0.79

12 19 0.64 1.6e+03 -0.6 0.1 18 26 783 791 782 798 0.85

13 19 0.0052 13 6.1 0.1 13 43 850 877 840 878 0.84

14 19 1.8 4.5e+03 -2.1 0.0 18 26 893 901 888 910 0.82

15 19 0.0028 6.8 6.9 0.5 17 36 928 944 920 951 0.79

16 19 0.081 2e+02 2.2 1.2 19 31 974 986 969 995 0.81

17 19 0.86 2.1e+03 -1.0 0.2 14 28 1043 1057 1037 1073 0.80

18 19 1.5e-05 0.036 14.2 0.1 11 44 1091 1121 1087 1121 0.89

19 19 1.1 2.7e+03 -1.4 1.3 17 26 1156 1165 1145 1180 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	4.9	1.2e+04	-3.5	0.1	17	22	12	17	6	18	0.80
2	19	4.9	1.2e+04	-3.5	7.3	11	43	240	267	233	268	0.76
3	19	1.6	4e+03	-1.9	0.3	15	39	386	407	382	410	0.64
4	19	0.5	1.2e+03	-0.3	0.4	18	38	468	485	463	485	0.82
5	19	0.39	9.6e+02	0.0	2.2	14	27	497	510	492	524	0.71
6	19	2.1	5.2e+03	-2.3	0.5	12	27	523	538	510	546	0.72
7	19	4.5	1.1e+04	-3.4	0.0	13	27	592	606	589	613	0.75
8	19	3.5	8.5e+03	-3.0	0.1	15	28	622	635	614	638	0.76
9	19	4e-07	0.00099	19.2	0.5	14	44	686	713	681	713	0.91
10	19	2.4	5.9e+03	-2.5	4.4	17	30	719	734	714	756	0.74
11	19	0.58	1.4e+03	-0.5	0.4	13	26	746	759	736	762	0.79
12	19	0.64	1.6e+03	-0.6	0.1	18	26	783	791	782	798	0.85
13	19	0.0052	13	6.1	0.1	13	43	850	877	840	878	0.84
14	19	1.8	4.5e+03	-2.1	0.0	18	26	893	901	888	910	0.82
15	19	0.0028	6.8	6.9	0.5	17	36	928	944	920	951	0.79
16	19	0.081	2e+02	2.2	1.2	19	31	974	986	969	995	0.81
17	19	0.86	2.1e+03	-1.0	0.2	14	28	1043	1057	1037	1073	0.80
18	19	1.5e-05	0.036	14.2	0.1	11	44	1091	1121	1087	1121	0.89
19	19	1.1	2.7e+03	-1.4	1.3	17	26	1156	1165	1145	1180	0.62

Sequence Information

Coding Sequence: ATGGACAAGGTGGTGGAGTTGCAAAATGTAGAAAACGTGTGCAGGCTCTGTTTATCCACCGACGAGCCCAAATTGTCGGTATTCGAAACGGAAGACTCTCTGCTGTCCATGGCTAGCAAGATACAAGCTTGCCTATCGATTCAGATTTCAACTACAGACAAATTGTCGACTCAGATATGCGCACAATgtgttaaaaatgtaaatcaaTGGCATAGTTACAAAGAAACCTGTTTAAGTTCACAAGAGAAGTTGCATCAGTGGCTGGAACGGCAGCATATGCAACAAAGTCCCATGGTTGTAACCATCAAGGATGAACCTGTTGATTTGGACTTTTATGAAGACAACGTCGAAGTCATTTCTGAATCTACTACTGATTCAAATTTGGAAGTCACCAATCTTGAAGGGAATGTGAATCACTTGGAAGATAGTGCTCGATGTCAGAAAGTAACTGATGGCGATGAAGTAGCTGTGGATGAAGATCAACCAGTCTTGGTGACAGACatgaatatttctataaaaccTGAACTGCAAGATGATTGTGATACGGATTGTACTATCGAAATAGAATCCGTTACTGGTAATGAACTTGTCGCAAATCCTCTTGCAAGTTCAGAGGAGAGGATCATGGAAGCTGATTCCACTCAGAAATCCAGTGCATCTGCCTCagcaaacaagaaaaaaaccaGAAGAGGTCCTCATACTCACTTTAGGGGTGcacgtatttttaaacaaaagtgTGTACATTGTCAAATTAATTTGCACTCCAAGCACTCTTATGCAAAGCACATGCAAAGATTTCACGTTGACAAACAGAATGGTAGTGTCGCTAAACCGGAATTAAAAGATGAGGAAGAGCTTGTCGAAGATCTGGAAGATGAATTAATGAGTATGGAAAAGGATGCTCCATTGACGCAAGTGCAGCAAAATATTATTGGTCAGTTGAAGACATTTTCATGTTACTCCTGTCAGCAAAGCTTCAACGATCGCAGAAGCACGCTTTTCCATATTCGTCAGCATATGCCCGACCTGAGACCGCACACGTGTATCGCGTGTTTGACAGAGTTCCCAGATCGATCAATGTACAAGTTACATTGCGGAGCATCGTTTGAATGTGCAATGAAAATCGCCCTTGTTGTACCGAAACAAGGCGAGGAGAAATACTTCACGTGTAATATGTGTTTACGTCCTATGCAGAACAGGAAACAATTGCTTAGCCATTTGTCGAAACATTCGGACAAACAGTACGAGCAACTGGTATCCCCGACACGATCTCCTCCTAAATTGAAACCAGTGATTCCTCTGCCACCTTTGAAGCAAGAATCACGAAAAAGAACGTTCgaggaaaattatatttcaaacatacCCAGCCCTTACAAAAATGGCGATCCTGCGCATAATCATATATGTGACTTGTGCGGTATGATTTACAGATATAAGCCAAATATGCTGAGGCATAGGGATCTGTGTCTATGTCTGTCATCAGACGTTAGGACATCCTACAGATGCGTTCACTGTGGTATGACATATCttgtattcaaaaaattccattctcACATTACGCAGGAgcataaaaagaaagatctcgTATGTTCTGAATGTGGCAGCAAATTCAAAACTCCTAGTAACTATTTGGAACATCACGAGGGACATCGTCGCAATCGTGACAAAAAACACTCTCTTAATTCGAAAAGCGACTTAACGAAGATCCCGCAGAACATTTCAAATAAGGACTGGGACACGTTCGAGGCTGAAGTAAATGCTAAAAAACTGTCCGACAGTAATCAGTACAGCTGTGCTCTCTGCAATTTGGAATTTACTACCAGAGCCGAGTTAACAGAACACAGAAATCTACATCTGAAAGTGAAGATTTATTCTTGCGTCATCTGTCGTAGCATGTTCAGCAGCGCAGGTGCTTTGGAAATTCACATGAAGGATCACGGCATAGAAGACCCGAATGAGAGAAATGCAAACAGCTCCTGCTTAGAGTATGGTACGGTGGAAGAAGAATCAAAAGATTCAAACTCAATGAACGTAAGTGCCACTTCGGATCCTGGTGATAAGAAGAACGAGTGCAATAGGtgtggaaaaatattctcgaatAGCGCAAATCTTAAAAGGCATATAAGAAATCTCCACAATGTTACTAGAGGCCACCTCAGCTGTTCCTACTGTTGGCGAACATTCAAGAGCAAAGAAACACACGACCGGCACGTTACGATCGATCATCTAAAATCCTCCAAATCCATGCTTCGATGTTCCAAATGTCCAAAGACTTTCTTCTTCCAAGCCAATCTGAATCTTCATTTCGAGAATACGCATACCGAGAAATCATTTCCAGTTGGCCACAAATGCGATATTTGCGGTAAATCTTTCATAGAAGAATCATCTTTGAAGATACACAGAAGTTGGCACAATCGAGCAAACTCTAGACTGAGCTTGTACTTCATGAAGAAAGAAGATCGAAAACAGGAGGAACCTGTGAATTCTAATACAAATACCCGGCCAGCGAGAGCGCGAAAATCTTACCCGAATTCACCTTCGACGAAACTTAATGGTAATTTCCAATGTCAAGTCTGCAGTGAAAAGTTCAATGATGTAACAGAACTGAGGACACACTTATGGGACGTGCACTGTGCACGCAGCAAAAATGAGAAAACTTTCCCCGATGGCGAGTTCCATTGTGAACTTTGCATGAATGTTTTCCCGGATAAGGAAACGTTGGATGTGCATTTGCAGTGGCATAAAACTCAACCAATTCTCAACGATGTAACACAGTCTGATAACACGTGTGAAATTTGTGGGAAATCATACAGCTCGAAGAAGATACTGTCCAGACACAAGAAACTTCACAAGTCCACAATTGCAGCTGCTGCGAAGTTACAATCAGCTGACAAAAACTCAGCTAGCAGTCAACCTTTATGCACAATCTGTCACAAGGTGTTCAACAACAATCGTTCGCTCCAGTGTCATAGACTGAACGTACATGCAAACATATTCAACCAACAATCGCAACAGGTACAGAACAACACGAGAAGAGCGTCTCAGGAAGAGCAAAGAactaaaagaataaaattagagCAAGAGGACAGGCAAACACCTTCTGCCATGGATGCTATGAGCGCGGGCAAAAAATCCGTCATGTGCCACGTCTGTAGGAAATTCTTCGCAAACATGAGCGTGCTTTACAAGCACAAACAGTTGGTACACAAGACTCATACGAATctggtaaaaaattttactaaatcgTACCAAATGGAATGCATACCGTTGCCCAGCAGCGATGGCAAAGTCTCTTGTAACGTTTGTTACAAAAAGTTCCCTGGCGTGTCGAATTTGCGTCAGCACTTTACTGTAAAGCACAAGAATGCTCCTGTTAAGTATGCTTGTACCGTAGATGGATGCAAACTCACATTTCCTACACCGATGATCCTAAAGAACCACGAAATGTCGCACACCAGCATCATCTTCAGTTGCAACTTATGTAACAGGCATGTGTTCAACAGGCCTGCGATGTCGAATCACATACTGACGGTACACAACATCGTCTACAACGCTGAGAGCAGCAAAAACTTCCACAGAGAGCTAGATTTGGGCAAATACGTGGTAGAGGGTGCAGTAGACGCTACCTGTCCTCAATGCAAGATCAAATATCCCAACAACAGGGCTATGAAGATTCACTTCTTCAAGTATCACGAAAACTCAAACGAATAG
Protein Sequence: MDKVVELQNVENVCRLCLSTDEPKLSVFETEDSLLSMASKIQACLSIQISTTDKLSTQICAQCVKNVNQWHSYKETCLSSQEKLHQWLERQHMQQSPMVVTIKDEPVDLDFYEDNVEVISESTTDSNLEVTNLEGNVNHLEDSARCQKVTDGDEVAVDEDQPVLVTDMNISIKPELQDDCDTDCTIEIESVTGNELVANPLASSEERIMEADSTQKSSASASANKKKTRRGPHTHFRGARIFKQKCVHCQINLHSKHSYAKHMQRFHVDKQNGSVAKPELKDEEELVEDLEDELMSMEKDAPLTQVQQNIIGQLKTFSCYSCQQSFNDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPKQGEEKYFTCNMCLRPMQNRKQLLSHLSKHSDKQYEQLVSPTRSPPKLKPVIPLPPLKQESRKRTFEENYISNIPSPYKNGDPAHNHICDLCGMIYRYKPNMLRHRDLCLCLSSDVRTSYRCVHCGMTYLVFKKFHSHITQEHKKKDLVCSECGSKFKTPSNYLEHHEGHRRNRDKKHSLNSKSDLTKIPQNISNKDWDTFEAEVNAKKLSDSNQYSCALCNLEFTTRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCLEYGTVEEESKDSNSMNVSATSDPGDKKNECNRCGKIFSNSANLKRHIRNLHNVTRGHLSCSYCWRTFKSKETHDRHVTIDHLKSSKSMLRCSKCPKTFFFQANLNLHFENTHTEKSFPVGHKCDICGKSFIEESSLKIHRSWHNRANSRLSLYFMKKEDRKQEEPVNSNTNTRPARARKSYPNSPSTKLNGNFQCQVCSEKFNDVTELRTHLWDVHCARSKNEKTFPDGEFHCELCMNVFPDKETLDVHLQWHKTQPILNDVTQSDNTCEICGKSYSSKKILSRHKKLHKSTIAAAAKLQSADKNSASSQPLCTICHKVFNNNRSLQCHRLNVHANIFNQQSQQVQNNTRRASQEEQRTKRIKLEQEDRQTPSAMDAMSAGKKSVMCHVCRKFFANMSVLYKHKQLVHKTHTNLVKNFTKSYQMECIPLPSSDGKVSCNVCYKKFPGVSNLRQHFTVKHKNAPVKYACTVDGCKLTFPTPMILKNHEMSHTSIIFSCNLCNRHVFNRPAMSNHILTVHNIVYNAESSKNFHRELDLGKYVVEGAVDATCPQCKIKYPNNRAMKIHFFKYHENSNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417894;
90% Identity: iTF_01417839;
80% Identity: iTF_00982475;