Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030396.1:40808405-40834906[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.011 1.1 11.5 3.7 1 21 72 92 72 93 0.94

2 11 0.12 12 8.2 0.1 5 21 198 214 196 215 0.90

3 11 0.00046 0.046 15.8 0.7 2 23 294 315 294 315 0.97

4 11 0.12 12 8.2 1.0 1 17 321 337 321 338 0.94

5 11 0.00033 0.033 16.3 0.6 1 21 368 388 368 389 0.94

6 11 0.0008 0.08 15.1 2.6 1 20 519 538 519 540 0.94

7 11 0.00029 0.029 16.4 3.5 1 23 650 672 650 672 0.99

8 11 2.1e-05 0.0021 20.1 1.3 1 23 678 700 678 700 0.99

9 11 5.8e-05 0.0058 18.7 1.9 1 23 706 728 706 728 0.99

10 11 0.0098 0.98 11.6 2.4 1 23 734 756 734 756 0.98

11 11 3.5e-06 0.00035 22.5 1.1 1 23 762 784 762 784 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.011	1.1	11.5	3.7	1	21	72	92	72	93	0.94
2	11	0.12	12	8.2	0.1	5	21	198	214	196	215	0.90
3	11	0.00046	0.046	15.8	0.7	2	23	294	315	294	315	0.97
4	11	0.12	12	8.2	1.0	1	17	321	337	321	338	0.94
5	11	0.00033	0.033	16.3	0.6	1	21	368	388	368	389	0.94
6	11	0.0008	0.08	15.1	2.6	1	20	519	538	519	540	0.94
7	11	0.00029	0.029	16.4	3.5	1	23	650	672	650	672	0.99
8	11	2.1e-05	0.0021	20.1	1.3	1	23	678	700	678	700	0.99
9	11	5.8e-05	0.0058	18.7	1.9	1	23	706	728	706	728	0.99
10	11	0.0098	0.98	11.6	2.4	1	23	734	756	734	756	0.98
11	11	3.5e-06	0.00035	22.5	1.1	1	23	762	784	762	784	0.99

Sequence Information

Coding Sequence: ATGCATGACACCTACGCATTTTTCCATGGAGAAATTTGGTTACTTATTACATTATGCTTGGACTGCTTGGAGAACTCGAAATTTGGAATGTTGCCCAGCCTGCAAGCGAGCAAGCGGAATTCtGTGGAACAGACATCAGAAAGTAGTATGACTACATTTATGAAGTATGAAGAATCAACGGACCAAATAGCGGATTCACCCCTGGTCAAGAATTTTACGTGTAGTTTGTGCGGATTCCAGTTCAGCAAACAAACGTATTTAACAAATCATTTCAAGCATTGCAAGGATGTCAAGGATCCAGCCGATAGGTTAGGCGCAGACAGAGTCACTATTAAACAGGAACTTAAAACTGAAGACCAAATGCACAGTATGGAATTGTTTGAGGAACACACAACAACTGCACCAACATTTGACATAAAACGCGAAGAAATTGAAATCACCGAAACCACTATTTCCGGACAACCTATGGAAAGTCTGAAGCCGGAATCCTCACACGTACTGGCCACATACACCATGGGCGGCTACACAGCTACGCAATCAACGCAACTCGGTGACTTTGTGAATGTAGAACAACCAGAGAAGCCTAATAGTTTTTGTGGGCTCAAGTTTAGCCAAGCAGAGTATCTAACAAATCATTTCAAGCTTTGCAATGATGTCGAGGATCCTGTCGATAAGTTGGCCGTGGACATAAGCACTATTAAAAAGGAACTTATCACAGAAGACCCTATGCACAGTATGGAATTGTACacaaaaactgaaccgatATTTGACATAAAACCCGAAGAAATTGAAATCGCCGAAACCACAATATCCGAACAACCAGACCCATCTACACAACTTGATGACCAGGCGAATGTAGAACAACCAGAGAAGTCTAATAGGTGCActatatgtgactatgcttgtgcaGAGCTTTCTACACTTACAGTTCATATGAGAGAGCACCCAGGAgcgaaaccatttaagtgcaccatcTGTGACTATAGTAGTGCTCAGTGTAGTTCTCTTCAAatgAGAGAGACATCAGCTAGTAGTATAACTGCATTTAAGAAGTGTGATGAATCAAAGGACCAAATAGCGGACTCATCCCTAGTCGGAAAGTTTAAGTGTAGTTTATGCGGGCTCAAGTTTAGCCAACAAGCGTATTTAGCAAATCATTTCAAGCTTTGCAATGATGTCGAGGACCCTGCTGATAAGTTTGGCGGAGACATAATCACTATTAAAAAGGAACTTAAAACTGAAGACGGGATGAACCGTCTTGAATTGTTTGATGAACACacaaaaactgaaccgatATCTGACATAAAACTCGAAGAAATTGAAGTCACCGAAACCACTATCTTTGGTACCGCTTCTCCACAATCTGGACAATCTACAAAAAGTATGAAGACGGAGACTCCAGATGAACTGTTCACGTTAACCAAGGGTGACTACACAACTGCGCAACCAACACAACTTGAAGAAATGGGAGAGACATCGGAAAGTAGTAAGACTACATTTATAAAGAATGAAGAATCAACGGGCCAAATAGCGGATTCATCCCTGGTCAAAAAGTTTACGTGTAGTTTGTGCGGATACCAGTTTAGCCAACAAAAGTATTTAACAAATCATTTCATGCATTGCAAGGACGTCAAGGATCCCGCTGATAGGTTGGGCGTAGACAGAATCAGTATTAAAAAGGAACTTAAAACTGATGACCAGATGCACAGTATGGAATTGTTTGATGAGCACGCAAAAACTGAACGGATaTTTGACATAAAACGCGAGGAAATCAAATTCACCGAAACCACTGTCTCTGGCACAGCTTGTCCACAATCTGGACAGCCCGCGGAAAGTCTGAAGACAGAAACTCCAGACGAACTGTTCACGTTAATCAAGGGTGACTTCGCAACTGCGCAACCAATGCAACTTGAACAGCATGTGAATGTAGATACAACAGGGAAGCCATAtaagtgcaccatatgtgacTATACTTGTGTTTATGGTTGTGCTCTTACAGCACATATGAGAACTCACGCCATAGAGAAACCATACAAGTGTAGCTTATGTAACTATGCTAGTGCTAATCGTTCTTCTCTTAGACTTCATATGAGGAAGCACACAGGAgataaaccatttaagtgcacgaTGTGTGAATATGCTTGTGCAAACAGTTTTGCTCTTACAGAGCATATGAGAACTCATGCTGGAGGGAAACCATACAAGTGCACCTTATGTAACTATGCTAGTACTCTGCTTTGTACTCTTAGAGTTCATATGAGAGAGCACACAGAAAacaaaccatttaagtgcactatttgtgactatgctagtgctCATAGTAGTTCTCTTCAGGTGCACATTAGAACGCACACAGTTCTCAACCTGTTCCGATGA
Protein Sequence: MHDTYAFFHGEIWLLITLCLDCLENSKFGMLPSLQASKRNSVEQTSESSMTTFMKYEESTDQIADSPLVKNFTCSLCGFQFSKQTYLTNHFKHCKDVKDPADRLGADRVTIKQELKTEDQMHSMELFEEHTTTAPTFDIKREEIEITETTISGQPMESLKPESSHVLATYTMGGYTATQSTQLGDFVNVEQPEKPNSFCGLKFSQAEYLTNHFKLCNDVEDPVDKLAVDISTIKKELITEDPMHSMELYTKTEPIFDIKPEEIEIAETTISEQPDPSTQLDDQANVEQPEKSNRCTICDYACAELSTLTVHMREHPGAKPFKCTICDYSSAQCSSLQMRETSASSITAFKKCDESKDQIADSSLVGKFKCSLCGLKFSQQAYLANHFKLCNDVEDPADKFGGDIITIKKELKTEDGMNRLELFDEHTKTEPISDIKLEEIEVTETTIFGTASPQSGQSTKSMKTETPDELFTLTKGDYTTAQPTQLEEMGETSESSKTTFIKNEESTGQIADSSLVKKFTCSLCGYQFSQQKYLTNHFMHCKDVKDPADRLGVDRISIKKELKTDDQMHSMELFDEHAKTERIFDIKREEIKFTETTVSGTACPQSGQPAESLKTETPDELFTLIKGDFATAQPMQLEQHVNVDTTGKPYKCTICDYTCVYGCALTAHMRTHAIEKPYKCSLCNYASANRSSLRLHMRKHTGDKPFKCTMCEYACANSFALTEHMRTHAGGKPYKCTLCNYASTLLCTLRVHMREHTENKPFKCTICDYASAHSSSLQVHIRTHTVLNLFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -