Mpro044499.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030396.1:18719268-18721215[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.14 14 8.1 5.7 2 23 155 176 154 176 0.94 2 13 8.4e-06 0.00084 21.3 1.1 1 23 180 203 180 203 0.98 3 13 4.1e-05 0.0041 19.1 1.7 1 23 249 271 249 271 0.98 4 13 0.0012 0.12 14.5 2.7 1 23 277 300 277 300 0.96 5 13 0.46 46 6.4 0.2 2 23 308 330 307 330 0.90 6 13 7.7e-06 0.00077 21.4 0.5 3 23 341 361 340 361 0.98 7 13 8e-05 0.008 18.2 3.1 1 23 367 390 367 390 0.96 8 13 3.6e-05 0.0036 19.3 0.1 1 23 429 451 429 451 0.98 9 13 0.00013 0.013 17.5 1.8 1 23 457 480 457 480 0.96 10 13 0.013 1.3 11.2 0.2 1 23 486 509 486 509 0.92 11 13 0.00038 0.038 16.1 1.1 1 23 518 540 518 540 0.96 12 13 5.8e-05 0.0058 18.6 0.2 1 23 546 568 546 568 0.97 13 13 0.00054 0.054 15.6 7.4 1 23 573 595 573 595 0.97
Sequence Information
- Coding Sequence
- atggcATCAATTTGTCGATTGTGCCTAAAATCTTCGTCCGAGGAACAATTTCGTAGCATATCATCAGTTAACCAAGAGGAATTGATTATAATACTACCTGAAATCGACATACATATTGTTCAATCTCCGCTAATATGCTCAGATTGTGAAAATTGTCTAAGCCAAGCTTATTCCTTCAAATCAACATGTTTAAAGACAGAGAGGCGTATTGCCACTTACGCTGATACTTACGGAGAAAATATCGACCTAAATAGTCTTTTGAGCACTCAAGTGTGCTTTGAAACCAAGCCTGACCTAACCGAGCTTGATATGAAAGGTACATTTTCTTTGACGACTTCAATTGATATAAAACAAGATAAACCAGATATTGACgataatagtaataatgatGTACTGAAGTGTACGAATGATAGTATTGATGAAGTAAAACCACTTATTCTAGAAAGGCAATATATTAAGTTATGTTGTGAAATTTGTTTCAAAAAGTTCAAGACAAAGCGTGCACTTACCTTTCATAAGAAATCACACTTTAGAAAATATCAATGTCCGTCATGTGCAAAATTATTTAGGCAGGCTGGTTCGTTGAGAAAACACATGCGACGTTTTCACCCAGAATTCAAGAGAAATATTACATCAGAAATAAAATGCTCCAAGTATGgtattgaaattgaaaattgtcCTAAATGCGGAAAGGAAAACTGTGAATGTCCAGAACGTCCACCGCGTACTTGCCCAAGACTTAGATACAAATGCAAAACATGCGGAAAACTCTTCAGATTTATCTACCTATTACAACGACATCAAATAGTACATCAAACGGAAAAAAGGCACGTCTGTAAAATCTGTAAGAAAGGCTTTGTTTGCGCTAGCTACCTCGAGAGACACATAAACATTCGACACGCTGGCAAATATGAACAAAGTTCTTGCCCAACCTGCGGCAAGCTTCTACTGGATGAATTTAGCTTGAAGAGGCATATCGAAGCGTTTCACTCGACCATAAGAACCACTAGTACTAAAATATGCGAAATATGCGATAAAGAATTTACTAAACTAGCATCGTACCGCAGACATATGCTCACGCATAACGAAACCCCTGAATTTATTTGCGAGACTTGCAACGAAAAATTCACGACAAAATTCTGCCTTCAGAAACACATAAACATCGACCACTTTGATAAACGTGAATTAATTAAATACATATGCGAATTTTGTGATCTAGAATTCTTGAGACGGCATGAATACCACGACCATAAAAAAGAAACTCACCATACCGATGGGAAAAAGTACGCTTGTGAAATATGCGGTATCTCATGTAACGTAAAGGCAAACCTGGATATCCATATGCGTATTCATACTGGCGAACGCCCTTATAAATGTGATGAATGTGGTCAATGTTTCCGTCAAGTTGGTAGTATGAATGTTCATAAGAGGGCAAAACATTCGGAGGTAAAGCCCTTTGCATGTCAGTATTGTGATAAGAGTTTTGCTTGGAAAGGGGTTTGGACAAAACACTTAGAAAGGGTCCACAAGGTGGGGGttactgaaaagaaatttgCATGTACCTTCTGTCCTAAAGCTTTTCACGTTCAGAATGAATTAACGCGTCACGTAAAGTGGCACACCGGAGAGCGTAATTTTATCTGTGATGTCTGCAATAAGGGGTTTATTAATAATCCCGCGCTAAAGAAGCACAAACTCATACACGATAAGAAATTGCATGTTTGCGATGCCTGCGGTAAGAGtttttatcaaaaatgtcatCTGAACAGGCACAAGAAGGTGCACGGTGAAGATCATATGTTGACTACAGTGGAGCAAGTGAAATTAGAATCAAATGATTTCCAGTCGCAGTCACCATCATTTGTATTGCCCAACGAAAATGATTCTTAA
- Protein Sequence
- MASICRLCLKSSSEEQFRSISSVNQEELIIILPEIDIHIVQSPLICSDCENCLSQAYSFKSTCLKTERRIATYADTYGENIDLNSLLSTQVCFETKPDLTELDMKGTFSLTTSIDIKQDKPDIDDNSNNDVLKCTNDSIDEVKPLILERQYIKLCCEICFKKFKTKRALTFHKKSHFRKYQCPSCAKLFRQAGSLRKHMRRFHPEFKRNITSEIKCSKYGIEIENCPKCGKENCECPERPPRTCPRLRYKCKTCGKLFRFIYLLQRHQIVHQTEKRHVCKICKKGFVCASYLERHINIRHAGKYEQSSCPTCGKLLLDEFSLKRHIEAFHSTIRTTSTKICEICDKEFTKLASYRRHMLTHNETPEFICETCNEKFTTKFCLQKHINIDHFDKRELIKYICEFCDLEFLRRHEYHDHKKETHHTDGKKYACEICGISCNVKANLDIHMRIHTGERPYKCDECGQCFRQVGSMNVHKRAKHSEVKPFACQYCDKSFAWKGVWTKHLERVHKVGVTEKKFACTFCPKAFHVQNELTRHVKWHTGERNFICDVCNKGFINNPALKKHKLIHDKKLHVCDACGKSFYQKCHLNRHKKVHGEDHMLTTVEQVKLESNDFQSQSPSFVLPNENDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00138378;
- 90% Identity
- iTF_00138378;
- 80% Identity
- -