Mpro031796.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melinopterus prodromus
Gene Symbol
Zbtb41
Assembly
GCA_964023965.1
Location
OZ030394.1:10792438-10795646[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.13 13 8.1 3.3 2 23 171 192 170 192 0.95
2 16 0.00042 0.042 15.9 0.6 1 23 197 221 197 221 0.99
3 16 0.68 68 5.8 2.1 1 23 224 246 224 246 0.96
4 16 0.0014 0.14 14.3 0.6 1 19 250 268 250 272 0.96
5 16 2.1e-05 0.0021 20.0 0.1 1 23 278 301 278 301 0.96
6 16 7.2e-06 0.00072 21.5 0.3 1 23 307 330 307 330 0.98
7 16 4.5e-05 0.0045 19.0 2.7 1 23 337 359 337 359 0.98
8 16 3.8e-05 0.0038 19.2 0.5 1 23 365 387 365 387 0.95
9 16 3.9 3.9e+02 3.4 0.7 4 16 393 405 393 407 0.79
10 16 0.0019 0.19 13.9 0.7 2 23 569 592 568 592 0.91
11 16 0.67 67 5.9 1.6 2 23 594 615 593 615 0.95
12 16 1.5e-06 0.00015 23.6 0.5 1 23 621 644 621 644 0.98
13 16 7.7e-05 0.0077 18.3 0.3 1 23 650 673 650 673 0.98
14 16 0.0033 0.33 13.1 0.5 1 23 680 702 680 702 0.97
15 16 1.2e-06 0.00012 23.9 1.0 1 23 708 730 708 730 0.99
16 16 7.3e-05 0.0073 18.3 1.1 1 21 736 756 736 757 0.95

Sequence Information

Coding Sequence
ATGGATAAGTACTGCAGATTATGTCTTTCGTTGACATCTGAACATTTCTACGAAATAGACAATTCTGAATACCAGAAACAATTGGAAGCCGTAATACCAGAGCTAaatttaaaaatgatACAAGCATCGTTATTCTGTCACAAATGTAGCATACTGCTAAAAGCTGCATACGAATTTAAAACTGTTACCCTCCGAGCTGATAAACATTTAACAATTTTCGTAGGaataaataatactgatatgGTTCCTGTATCGGAAGTTATAAAAATTAGGAAAGACCTAGACAAGGGTTTTAATACAGCTACGACGGATGATATACCTTTTGTAGATATAGAGAAAATCAAAGAAATGAACGTATTATGCGATGACCAGTGCTTAGTGGAATTAAATCCAGAAACTGCTCCTCAATATCTTTCAAGTGATGAAGAAACCGTtgataataaaaacataaaacccAAACTCGACGATCCACAAAACAAAAACTCGGGGACCGTAAACAGAGCGGAACTAAAATGCCTCCAATGTGACAAAAAATTCCTGTTTTCACGTCAACTCAGACAACACCAATTCTACCACACAAACAACCATTATAAATGCGATATTAACGACTGCAACGAAAGTTTTATCATGAAACTCgatttaataaaacataaaaagacGCACACCAAATTCCAATGTAGTGTTTGCGGTAATGTAAAACAATCGTACCGAACGTATCAAAACCATTTACGAAAACACTCGGGGTTATTTCGATGCAAAACGTGCGGGATGGATTTCCAGAATTCTTCCGAATTGAAATCTCACGATGTTGTCCATACGGGCGTTCGAGAATTCATATGTGACCTCTGCGGAAAAGGTTTTGGACAGGCGTCGACTTTAAGAACGCATATAAGTTCGGTTCACGCTACGAAAAAGCCGTACGTTTGCGAAGTTTGCGGAAAAGCATTCACTCAGAGTACACTACAAAGACAGCACATGATTACGATGCATTTGGAACCAGATAGAACGCATACTTGTTCTATTTGTGGGAAGCAATTGAGGTTTAAATCATCGCTCTGGGATCATATGAAGAGACATAGTGGGGAGAGAAAATATGCGTGTAAAATTTGTGATAAACGGTTTTTTGATTCGACTGGGTTAAAAAAACACGTGGTTATTCATGGGAATGATAAACCGCACGAGTGTCCGTTTTGTTTTAAACGCTCAGAAAATTACTACCGTATGGATGCAGACGACTACCGACACAAAACGCAATCGGTAATCCCAGAAATTATTATTGAATTGGTCGAGGACCCTGTTATATGCGTAAAATGCTCCGAATTATTGTCTAGCgcttattattttaaaagcaatTGTTTACTAACTgataaagaattgaaaacatTCGTAATAGACGATGGAAATCAAATAAAGTTAGAGGAGTTTTTAAACCACAAAAACCAAGATTTACTGAGTGATGTGAAAATGGAAATTATGGATGAAGATGTACCTGAAAACAAACATGAAGACGCCAGCACCGTTTGTAACCCTCTTTGTGTTGATAATCGCCAAAACACAAGCAACCCTAAGCTGGACGTTAAATTAGCGGAAGAGAAGCCTGAAATAAATGTAAGCAAAACTTTGATGGAGAACAATAATGGAAAAAAACCAACAGATGGGAAAGTTGCAGAAAATACTAAACGAAAGCAGAAACCCACAATAATTCAATGTGATATATGTAATAGAATATTTCTACGAAAAAGTAGCTTAGATAGACACCTTAAGAGGAATGAACATAGTAAATGTACCATTTGCAACTTAAAAATGCCATGCAAAGCTTCCTTAGAAGAACACATGCGTTCCCATACAGGCGAACGACCATTCCAATGCACTTATTGCGGAAAGGCATTTACGCAATCAGGTACGTTAGGCACGCATGTTCGGAGCCTGCACATGTCCGAACGACCCTACGTTTGTGAATTATGCGGTATGAGTTTTCCAGTACGAAGCGCTTACACGGCGCATAAAAGAAGACGGCATGACGAATTAGAGAAAAAATTTGTCTGTAACTTTTGCGGGAAGGCATATCTTATTAAGAGTAAATTAAAACAGCATATGATTtggcatacaggagagaggaATTATTCGTGTCAGGTGTGCAGTAAGAGATTTGTTGATAACGGTACCTTGACAATGCATATGCGGACACATAATGGGCATAAACCATTCGAGTGCCCCATTTGTCAGAAAACGTTCaccaaaaattataataagAAAGTACATTTGAAGTCGTGCTCAAGGAAAAATGCTCGGAATACTGACGTGAAGTAA
Protein Sequence
MDKYCRLCLSLTSEHFYEIDNSEYQKQLEAVIPELNLKMIQASLFCHKCSILLKAAYEFKTVTLRADKHLTIFVGINNTDMVPVSEVIKIRKDLDKGFNTATTDDIPFVDIEKIKEMNVLCDDQCLVELNPETAPQYLSSDEETVDNKNIKPKLDDPQNKNSGTVNRAELKCLQCDKKFLFSRQLRQHQFYHTNNHYKCDINDCNESFIMKLDLIKHKKTHTKFQCSVCGNVKQSYRTYQNHLRKHSGLFRCKTCGMDFQNSSELKSHDVVHTGVREFICDLCGKGFGQASTLRTHISSVHATKKPYVCEVCGKAFTQSTLQRQHMITMHLEPDRTHTCSICGKQLRFKSSLWDHMKRHSGERKYACKICDKRFFDSTGLKKHVVIHGNDKPHECPFCFKRSENYYRMDADDYRHKTQSVIPEIIIELVEDPVICVKCSELLSSAYYFKSNCLLTDKELKTFVIDDGNQIKLEEFLNHKNQDLLSDVKMEIMDEDVPENKHEDASTVCNPLCVDNRQNTSNPKLDVKLAEEKPEINVSKTLMENNNGKKPTDGKVAENTKRKQKPTIIQCDICNRIFLRKSSLDRHLKRNEHSKCTICNLKMPCKASLEEHMRSHTGERPFQCTYCGKAFTQSGTLGTHVRSLHMSERPYVCELCGMSFPVRSAYTAHKRRRHDELEKKFVCNFCGKAYLIKSKLKQHMIWHTGERNYSCQVCSKRFVDNGTLTMHMRTHNGHKPFECPICQKTFTKNYNKKVHLKSCSRKNARNTDVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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